XLOC_012344 (gene) - C. hemisphaerica

Overview
NameXLOC_012344
Unique NameXLOC_012344
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000401:203137..212865-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012344 ID=XLOC_012344|Name=XLOC_012344|organism=Clytia hemisphaerica|type=gene|length=9729bp|location=Sequence derived from alignment at sc0000401:203137..212865- (Clytia hemisphaerica)
TGAATGGCAATTTAGTTTTAGTTTTTTTTATGATTTGCGATTTTTTGGCA GCCAATCAGAAAGAGAGTAAATATGAAAAAAAATAAATAAAAATGTATAC AGATTGTGATGAAGTCTTTTGAAGATTTCGAGCACTTCTTTTAAATCTCA AGATGAATGGAAATCAACTATTGTTCACTAGTGCGTTGCGACGACTTTTA TATTTAGAACTCTGGTTGCAGCGCACTGCCCGCTAGGTGAATGGAAACTA GGCTTAAAGGAGAGATATGCTGCACATTTTTTTTTTTGCTATTGTGGATA TTTTTTGCACACGGTACAAGAGAGTTAAATGTCTCTTCTGAGTTTCTGAT TGGCTAAATAAAAAAGAACAATAGGGAAGCTGCACAGCTCAGCGAAAAAA GTTGAAAAGTTTCAACTCTTGTTACGCTCAAAGCGACAGCCTTTGAAGGC TTAATTTATGTACATGTTTTTATTTTTTATTTTTTATGAGCATTGCACTT TTAAGCATGTCTAGGCTCAGATATGGGGAAAAATTAAGCATATGGCAAGC ATTACTTGAGCCTACGAGAAATGTTTTTTCCTGATTTGGCTTTTTTTGGC TGGAATTTTACGGATTTTCAGTATTTCCCTCGTAAATTTATGCTTTGGAT TTAAGCATCCCTCAAGCATTTTTTCAGCCTTATTAAGCTTTCGACCTAAG CATCTCTGAGCCTGTTTTCGGACTTTAGTATGCTTATAAAAAAACAAAAT GTAATTCATGTAATAATTAAGCCGTACGCCTTGTTCGCCGACCATAAAAT GCTGAGTGGCCTTAAGTAGATGATGGAAATTTGTATAAAATAATGTTCTG CTTTTTTCCGGACACACTCTCTGTACATCACACATTTTCACTGAATTTTA GTCAATTTTTTAAGAAATGCTGTCTGTGAAAGCCCTCGTCATTTTGTTGA TGTGCTCAATGTGGGTCAATGGAAAGCACAGGACACGACATCACCATGGA GTTAAACATACAAACAATTTACATTTCATCCAACAATATGCTGAGTCAGC ATTACCCAATGACGTAACTATTGGAAGGATTGAAAACAACACGGTAATTA TTATCAATTGAATTTTTTGAGTTTCTTTTGTGGCTTTTTTTTATCTATAG TATAGGTAACACGAACAAATAGTACAAAACTAAAGTTCCTAACCTCACGA AAAAGGGACCACCAGATCATACCGCCAGGAGGAAGGAACCCAAAATAAGC TAACAATAAATTGGTAAATAATCAATTTAATAAACCGTGTTTCCAATTTC CGTCGAGGAGAAAAGAACGCAAGATGCACGCCAGTCTGGCTGGAATGGTA TCACGCGTGAAAGGTGAGCGTAGGAGTTAGGTAAGCGTAGGAAGAAATTT TGTCGGTGGTAAGGGCTGAAACTGTTAATCAGCAGCCTATCACCAAGTTT TGCTCGTTCGCCTACGCAGCTCCTATTCTAGCAAAGGCACGCTGTCTTTA TGTTCCCGCCCTCTGACATGATTAATTAACAGACAAGTTTGCTAGTCTAA ATTCTTGCTAACACTTAGGTTGTCTGTACACAAACCCAGTATCTACGGCT TGTTTCAAAATTCATTGCCGTAACGTTTGTTGTCATTGTTTTTTCACATC ATTTGAGTTTTTTCAATTTGTTTTTATAACAGATCACCATCGGGCAAGCT GGGAAGAGAGATCAAACGGCCAACAAGCGAAGTACCGCTGACACTGATGT TGCAAAACTTGTCAAAGAATTGGGAAATGTCAACCTGAACGAGTTTACTT CAACAAAGATGACAAAAACTAAAGGTTAGGACAAAAATAATGTTGTTTGA GTGGGTGGGAGGGGCTTGTTGGGTGGTTCTTTAGTGGATTTTATAGGCAT GGAGTCAAGACTAACGAATATGAAATTCTTGAGCATTATCGAGCAAATTA TGTTGAAGCGTTTTAGCTACAAAATACATCTTGAGAAACCGAATACTAAT TTTTTGGACCTACCTTGGAGGTCCTATAAATTAACCGATGTCCGTCCGTC CGTTCGTTCGTCCGTCCGTTCGTTCGTCCGTCCGTCTGTTACCAGCTTTT CTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAATGATGCAAA ATGGTAATGCCCAAAATGTGACGGAGCCCGATTTCCGAAAAAAAATCATT TCCGGCCGAAAATGCCGGAAATATGCCGGAAAAACTGTTTTTTTGGCATT TTCTCGAGATTTCATCATTAGTTTTTTCAGATTTTTTGCACAAAGATGCG TATTAGCAATGTCCAAAACATGGCAGAGTCCGATTTTTGAGAAAAATTCT TTTCCGACCGAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTGCAGA TTTTCATCGGACTTTTTCCTTATAATTGGTTGTTTTTTCACAAAAAAACA TTGTTAATAGCAATATCCACGATCAAGCATGGTTCAATTGTCAATAAAAC TGGTTTTGAAGCCGGAACTTACTAAAAATCGACGGAACTGCCGATTTTCG CCGGAAAAATAGTATTTCTTGAATTTCTCCAGCTGTACTTCATGTTTTTT TATGAAATTTTGCACATTGATGTAAAATGACAATACCTAAAAAGTGACGG AGCCCGATTTTCGAAAAACATTTTTTTCCGGCCGAAAATGCCGGAAATAT GCCGGAAAAACTGTTTTATTTGGCATTTTCTCGAGATTTTATCATTAGTT TTTCTCTGATTTTTTGCTCAAAGATGCGTATTAGTTTTGTTCAAAACATG GCCGAGTTTGTTGTAATAAAATAGCCAGAAAATTAATTATTATTCAAAAA ACATTTCAACAAATATTTTTCAGCATAAGCTTTTCGTTTTATTAAAAAAC ATCATCAGTGCATATAGTGAGTTTGATTTTTGAAGAAATTTTTTTTCCGG CCGAAAATACCGTAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCAT TGGAATTTTTACTTTCAATTCGTTGTTTTTTCATTCAAAAACATTATTAA TAGCAATGCCCACCATCAAGCATGTTTAAATTTTAAATAAAATTGACTTT TGAAGCCGGAGCTATATAAAAATCGCCGGAACAACCTATTTTTGCCGGAA AGACAGTATTTCTTGAATTTCTCGAGCTGTACTATATATTTTTTCATGAA ATTTTGCACACTGATGCAATATGACAATACCTAAAATGTGACGGAGCCCG ATTTTAGAAAGTGCTGGAAATATGCCGGAAAAACCGTTTTTTTTACATTT TCTCGAATTTTCATCAAAAGTTTTTTCTGATTTTTTGCAGAAAGATGCGT ATTTGTAATGCTCAAAACATGGCTGAGTTTGATTTTTGAGAAATTTTTTT TTTCGGTTGAAAATGCCGGAAATCGCCGTTTTTGCAGATTTTCATTAGAT TTTTTCCTTGTATTTTTATATTTCTCACAAAAACATTATTGATAACAATG CTCACCATCAAGCATGATTCAATTGTCAATAAAAATGATTTTTGCAACCA GAACTTTCTATTTATTTTTCCCCTACAACCCTTCCCTCTCCCCCCATCAA CAATCAATGATGAATTTATTGCGTTATGCATTTTCGCTAAACGCTATATT TTTTGACTGATTTTTTTCTCCTCGCATTGCTATCCAACTTTCAGCATCTA GCTTGTTTTGGCTTACTTTCTTGAAATTTTTGGAAAAGTATAATGTTATC AAGGCATACTTACTCTCTTTCTTTTTTAGGTGGATTAGCTACATCCTTAG GAGCTGCAGAATCACTTTACGATAAGATTGAGAAGAAAGATAAAATGGGG ATCGCGATTTCAAGTATCACAATCGTCTCTGGGATCGCATCTATGGTGGG TGGACCTGTTGGGTACCTCGTTGCTATGTCTTTAGACATCATTAAAACCA TCTTGACGATCATAGATAAAAAGAAGAATGGCCCTCCTGAGAGTGAAGCA TCCAAGCTACAGAAGGCTATTGAAAAAGCGTTAAGGAAATTCTCGGAGAC TCAGTTAAGTGCTGATTGGAATGGTTATAAGAGATTGACTGAAGTTTATC TCAAACATTTAGATATGATTGAGAAATTCGATGAAGTGAAACCGTTGGTT GGTGAGGATAAGAAGCAATTCAATATTGAGGATATGGGTGGGAAGGAGGA AGTTAAGCAACAACTGTTTGATGAAGTCACACCGCAAATTTATAAAGTAT TAACATCCAGCACCCACCTACTTGGCAAGATTGAACATCATATTTCTAAA GTTTGTGATTTTGATATCCAAGCCAGAAAGGTGAAATCGGAACGTAAGAT ATTACACGTGGAAGAAAGGGAGCCAATCCCCACGCAAGATGAAATTGAAG AAAAAGATACATTCGCTACCAATTGTTTGAAGTTATATGAATTGTACTCT AAGATCAGCTCCTACCATTACCAAACATACTTGAAAAGTCTGGAAGTCAT CCATAAGATTGTAGGAGAAAAATACTTTGATAACGTCTCTAGTGGTAAAA CGCCTTCAGAAAGCGACGATAATGCAATTCCAAACAATCCCGGAGCATCC AATGGCAATCCTGCACCATCCAAAAGCAATCCTGCACCATCCAAAAGCAA TCCTGCACCATCCAAAAGCAATCCCGCACCTTCCAAAAGCAATCCCGCAC CATCCAAAACCAATTCCGCACCATCCAAAAGCAATCCCGCACCATCCAAA AGCAATCCAGCACCATCCAAAAACAATCCTGCACCATCCAAAAGCAATAA CAAGAAACCATCGAAGAGAACAATGGACCAAGCCAAAAAGGAAAAATCAA GAAGAAAAGCATACGTTTTTATGCATCTTCTCTTAGACATGATCCAAAAC TCTAGAGAATATAACAAGAAAGTTTTCAAACCTTTCCTGAACCCGTTCGA ACACTACAAGATGCGATACACAGTCAATTATTACTATAACAATGAGAAAA TGTATGAACATTTATCAACATACTTGAAAGACTTTTTCACTGATAAGGAA ACGATGAAAACTGTCCCCAAGAAAGTCATGTTTTGCAGTCAACAATCACT CCTTGGTTCCTGTTATCTTGAAGACGGACCCAAAGCACAAGACCCTGGAC CCTGGAGATCGGCTTATGTCCCAAAAGGTAAAGATACTTGTAAACTTTGT CATGCTAATGAATGCCCTAAATAGTGTGGTCGTGTTACAAAAATACAGGC TGTTTGTAGATTATGCTAAACGACCGCACTAAAAGTGGCTTGAAGAAAAT AAGAAGGCATAGTAACATTTTCTATCGCAAATTTAATTTTACGACTTTTT TCTCGAATTCATCAAAATGTAAGTCTTAGTTTATTTTTTCGTTTTGTTAG TAGCGAACAAGAGAGTCACTAAATATATCCGGAAATACAGTTTATCAGGG TCCTAGCCCATAGAATGAATGAAAATATTATAAAAAGTTATAAAAGCATG ATTCTATTTTCTCATTGAAGGTAAAAGTATCACAGTGGAATATCAGCTAA AAGCCAACAAAGCAATCACTTTCGATGCAGCCAAAGGACTTCCCATCAAA TTGATTGGACCTGCTTCAATGGGCATGTTATTCACTATGAAAATGTTATT CAAAACCAAATTATTGAGTACAAATAATGCCTACGACAACGAAGTGGAGG AGATGAAAAAATTTGATGGATACGTTAAACAAATCACTGTGGCTGATGAA GAAGGTTTGCGCTTTACTTGCTTATTAATCGGATTAACTTTCGCTAGATT AAATTTTGCGATTTCGCGAAATTCAAACTCGCGAAAACGCGTAAGATTTT TCACTCGCGAAACCAAATCCACCACAAAATTTTTGAAATTGAGTTTTCGA CGAAGAAACCAGTCCAAAGTCTCCATTTGTGGCAAAATATGGCTATTTTT CAGCTGTTTTTTGAGGCTTATTCGCGAAATTAAGTCCAGAAAATTTCGCG ATTTGGTTCGTGAACTTTAAATGAAAGACTTTAAATAATGGATTACCCAC GCGATAAAAATTTTCGATTTCCAAATTCCTGAAAGAAAATACGGACGAAA ACTTTCCTCTATGCGAGTTGTCGAACTGTATAAAAGTGACGAGATTTTAA AATGTATTTTTTTTCAAATTTCATTTAAGAACCTTTAAAAGATGACCAAG GAAAACCTAAACAAGCATCGAAGAAATCATTCAAAATGTGTGTGACCAGG GATTACTTGCAAGAAAGCCCAAGACATCATTCTTCCGTCTGCATCACGGA TGAGTACAAAGGAGCTGTGAAGACCATTTCATTCAGTGAAATCAAATCAC CAACGAAATGGGAAGGAAAGAATATCAGTCTTTCATGTAGTGAACCAGAT CTGGCGTTTGTTGGCACATATAAAAGTGGTAAACAAGATATCAACAAGCT TGATGCTANATGAAAAAATTTGATGGATACGTTAAACAAATCACTGTGGC TGATGAAGAAGGTTTGCGCTTTACTTGCTTATTAATCGGATTAACTTTCG CTAGATTAAATTTTGCGATTTCGCGAAATTCAAACTCGCGAAAACGCGTA AGATTTTTCACTCGCGAAACCAAATCCACCACAAAATTTTTGAAATTGAG TTTTCGACGAAGAAACCAGTCCAAAGTCTCCATTTGTGGCAAAATATGGC TATTTTTCAGCTGTTTTTTGAGGCTTATTCGCGAAATTAAGTCCAGAAAA TTTCGCGATTTGGTTCGTGAACTTTAAATGAAAGACTTTAAATAATGGAT TACCCACGCGATAAAAATTTTCGATTTCCAAATTCCTGAAAGAAAATACG GACGAAAACTTTCCTCTATGCGAGTTGTCGAACTGTATAAAAGTGACGAG ATTTTAAAATGTATTTTTTTTCAAATTTCATTTAAGAACCTTTAAAAGAT GACCAAGGAAAACCTAAACAAGCATCGAAGAAATCATTCAAAATGTGTGT GACCAGGGATTACTTGCAAGAAAGCCCAAGACATCATTCTTCCGTCTGCA TCACGGATGAGTACAAAGGAGCTGTGAAGACCATTTCATTCAGTGAAATC AAATCACCAACGAAATGGGAAGGAAAGAATATCAGTCTTTCATGTAGTGA ACCAGATCTGGCGTTTGTTGGCACATATAAAAGTGGTAAACAAGATATCA ACAAGCTTGATGCTAGATGGGGACCCTTCTTCAGCCCTTTCCCAATGATG CAGCTTCCTGGCAGTGTCCAATGGGACTCAATTACCGTCTACCCTTACAA AAATGAAATCGACAGCACAGTTGCAGCCATTGCAAAGAATGACAAAGTAT GCAACGGAGACAACAATCTACTATGTCAAGGTGAAACTATTGACAAGAAA CTGTTTGTGACCATCTGTAAAGAAGCTGAGTTGAAGGGCTACTGTGAAGA GATTCCAGTACTGAAAACTGAAATCACAGCTAAGAAGGAGAAAACAGTAC AGCTTACTGTTATCAATGGTAATGGCATTTACGGGAAAATTAAGCCCCTG GAATCCATGTATTCAATCGGTACGCAAAAGGTGCCCGATGAAACTGCTCT TATTCATACTGAAAATTTCGATAGTTATTATGATGTTGATAATTCGATAT GGCAACCTATGTTAAAAGATAGTGGAAAGAAAGCGTATAATTTGTTGCAA AGCATGAAAGTCCCTGATGATGTGATGGTTGAGTTGTATACAAAAGAAGA TAGTAAAAAGAATAAAAAGATGTTTGGACCATATCAAGGTAATTCAGCTG GCACACAACGTGTTGTTTCAACGTTTATTTAATGTTCACAACGTCCATTA TAACGTTAGATAAACGTCGAAACAACGTTGTGTGCCAGCTGGTAAATCAG TACTTCATATTATATTAAACTTGAAAATTTGTTACAAACTTTCGGGTCAT CGGGTCATGTGCCCCGTCGACAATGGCCGGGGGGGAGCAGGTCCGCTCAC TTTTTTGTAGACAATTTTTTTTTATCTAATGTTCTAATTATGGTCTTTAA AAGTTGTAATAAGTGAAAATTTGCCACACCTCAATTTTTTCGTCTCACCA GGGGCACCAGGGGCACATGTGAATTTGCTGTATTTGAAAAGAAGATAACT TGGTCTATATTAACTCTATAACTCTATAATTTGGTCAAATTTTTTATAAA ATTGTTCGTACATTAAAAAAATCATACACATTTTTTTGTATAAGAACAAA AATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTCAAATTAAACCTAAAA TGTTCTTAAGATGTTCTTATTATCACCATTTTGTGGGTAATTTTGTGCGT TTTTCTAAGAAATTGAGTCCCCAAACCCTTAAAATGTTCTTAATTTGTTC TTAACATTTTGGCCATCGAAGCCTTATAGTCTTATATAGTTTGTTCTTAT AAAAACGGGTACAATGCTTATTTTTTAACAAGGTCCATTGACTGTTGACC GAATCGATGGAAACGATGTCATTTCTAACATAATTGAAACCATCGTCATC AAGAGTGTATCCAAAGAAATCTTGCCTGAGGATACTGCATCAGCCGGTGA TCAACCAGATATTGAAGTCCAAGCTGAGGACCCTGACATGCCAAATGACG CCGAACCCGAAGGGGCCAGTGCACCGACTGGATCCGATATTGGAGAATCG ACAACTGACCCTAACACTATTGGAGATACAGTGGGAGATTCAGCAGCAGG GTCAAGTAATCCGTCAACGGGTGCAGCCAAGCCTTAGAATAATTTTTTTC AGTTTATGCACTCTTTGGGCCTATTTGTTTAATCACTATTTTTGCAATAT TTACTATAAGTGCACTCATTTCAATTTTTTCTGTCCAAAACTTTAGCACT TTTTTAACTAAACTTGCAAACTCCCTGTTAGCAAAAATAGTAAAAATCTC AACTTTCTGCAAGCAAAGCATCTAAAATCAGACTGTATGATGTTTTTAAA CCAATAAAATTAGAGAAGTGAAGAGCTGAAACTGTAGCTTGCTCCACGCA CGGGTCTATATCTGAAATCAAAATAGCAGTTATTTTCATAATGGCGAGAT AGTGGTCACACAGCCGTGAATAAACAATTGATTAAAAGTTACTTTTTAAA ATTTAAAGCACAACCAGGGATCATCAAGATGGCAGACAACAAATCTTGCA ATATTTGCTATCATTTTCAAAGTTTTCATGGAATTTCGTAGCACTTTTAG CAGATAGCATCTACAGCATTTATATTAAGTGAAACAAATATACCCTTAAT TTTTTTATCTTGATAGTGGTAACAAAAAAGAGTGCACAATTTTGGCAAGA AGAATTTTAATCTCATGTCTGGCGGAAAAACCGTAAAAGTGGAGAGGCTG AAGGCTCAAAATGAGAGATGGGAATGAGTCGCTAGGAATTCGAGAAAAGA TCCAATCTGCTCAAAAATAAGGAGGCTGAAGTCTCCCCAGTCTCCCCACT TCCGCCGGGCCTGAACCTAATAATATTATTCAAATTATGTAGCTTTTATT TCCATACAAATTGTTTACATTCAATTCATTACAATTATTAGATTATTTAC AGAACCCAAATGAATATTTATAGTATTGATAGAAAATTAACAGAAAAGAA AATGTACTTTAATTTATTGACTGACGTGATTTTTATTGGGAACTTACTTC ATAATCAGGATTCTTAGCTAATATACAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021994TCONS_00021994Clytia hemisphaericatranscript
TCONS_00021993TCONS_00021993Clytia hemisphaericatranscript
TCONS_00021992TCONS_00021992Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021994-proteinTCONS_00021994-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:203137..212865 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.66 1.82 0.83 0.44 0.95 1.01 28.93 30.37 8.92 9.81 16.85 3.46 9.88 9.27 6.23 16.71 16.35 15.81 0.23 0.13 7.88 9.22 12.77 12.56 21.32 25.27 2.85 1.07 0.63 0.49