XLOC_012710 (gene) - C. hemisphaerica

Overview
NameXLOC_012710
Unique NameXLOC_012710
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000429:16978..26775-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012710 ID=XLOC_012710|Name=XLOC_012710|organism=Clytia hemisphaerica|type=gene|length=9798bp|location=Sequence derived from alignment at sc0000429:16978..26775- (Clytia hemisphaerica)
CTAGGTATAAGCGGTTCGCCGTTTATAGTCAACTGCAAGGCGGACGTCCA
AGTATTATTCGAAGTTCGCCAATTCCAATTCGATGAACAAAAACTGAAAT
TAGACTTGAGAAACATCTTCAAACCTGAGCGTGTGTTTGTCTTCGAATCA
AAGGACAATGCCGATACCGTCGACTGCTCAAACGCCAATCAAGCCGAAGA
AAACCGATTTTATTTGACTAAAAGCGATACGGATTTAGAACCACAATGGC
TTCACGGAGAACCTATTGCGGACACACCACCATGTGGCTTTGACAACCTG
AAATGTGCGCAGGATGAAATTTCGAGTACGATTTCTACTTTGTTGATCTT
CGGTGGTCTTCCTTGTTTTACCCCGTCATTTTACTTGTTTAAGCTCTAGT
TTAGACTGCCCTGTCTATTCTAATTGTTAGAGTAGAAGTTGGGCAAAAAG
TTGGCAACTTAAATCTTTGCTTGGAAAAGATTGAAATAAGTCATTGCATT
GACGTCAAAAGAGGGCAATGCGTTGACTTTAGACAGCCCACTTTATGCCC
ACCTTAATTCACAATTAGAATAGGCAGGGCAAGGGGCCGTCTAAACTAGA
GCCAAGGATAAGATAACTTCTTGTTTTACATTATCCTTTATAACACGATA
GCGAATAATAAAGTGTTAAAAGCTCTCCCTGTCTCAGACGGATTTCTGTC
TCAAAATTCTGCATAATTCACCAAAATCTCAAGAATATGTGCTTTTTCGT
CTCAAACGGAAAACCTTGCTTTGACAACTGTTAATGGTAAATCAACTTTT
TAAGTGGCTGAGCTTTAGAACGAAACACAGTGTAAGTCTTAGTTAGTAGA
AAGCGCAATAACACATTCATCTACATCTATGCTAATTTCCATTATAGAGG
GTACCATCCTTGGATTGGCCATTTCATTGACAATGCTGGGTGTTATTGTT
TTTGTCATCCCAGTCTTTCTGTACAGGTAAAATATACTTTTCTTCGCTAA
AAACTTTTGCAATAATCTTTTATCGTACAAGCTCTTTTTATTAAAGGTAG
GTTTTTAGGGTATAGCAAAAAGTTGTCTACGACATTTTTGTTGATCCCTC
TTGGTTTATGTTAAACATCCCTCCTCTCAACGTTGAATCTAAACTATTTT
GCATACACTTTTTCAAACTTAGGAACTACCATTTAAAGAAAGAATTGAAC
TTGCAACTGTGGAAGATATCGGCTGCTGAGTTGTTCTATCATGATTGGAG
TGTCTCAACGTCTTCTTTGGGAAGTCTGGTAAGTTTGGAAAGTTTATAGT
CCATCATATTGCACAAAAGACTTTTTTTATCTGTATAAGTTGTCTATCGT
AATTAAATTTATAACTTATTGATTCTATAAAAATTTACTAAGCTCTACCT
GTCTTCCATAAAGGTTTTACCTTCTTGAATTTCTAGAAAAACAAATTTGC
CCCAAAGGTGTATAGCCATTAAAAAAAGTATATTTTTTTAAACTAATACC
TCTAATTGTCTATTTCACGGTGATAATGAATCATTTCATTCTTTCTATAG
ACGAGCCATACCGGCAGTCTTCACTACGACATCCCAACCAAACAACAATT
CATCCCCACAGCGTATTATAAAGGTACCTTGGTGGCTGTGAAGAAAATCA
ATAAGAAATCAGTGGAACTGTCCAAGAACATTCTCATGGAATTGAAACAG
GTAATTAGTGCATTACAAGCTCACTCCTTTTTTATAAAAACACACGTAAA
AGTGTCTCGAATTGACCCAGTTTCATAAAATTTCTGTGCGAGATCTCAAA
AGCCTGGATTTCAGAAAATGTAGTAATCTATCCGCAGGAACATGTTTTGT
CTTTCCCGGGACTCATCAGTGCGGTTCATACAAGCGAGTATAGGCTGCTG
TTGTCACCAGAGTGCTCAAAACACTAAGTGTTGAGCTTTGTATAATCGCT
TGTGGCGAGCGGAGAAGCAGAGCTAAAAAAACTGGTACCTATTCAAATCC
TGATGATGATCTTATACTTTCATTTAACCTTAGATGCGAGACGTTCGAAA
TGAGAATTTGAATCAATTCATTGGCGCATGCGTGGAACCAAATAATGTCT
TAATCATTACGTCATATGCTTCGAGAGGGAGCCTACAAGTAAGCAAATCA
TGTTCAAAAATTTTACTATTTTACAATTGGAGCTGTTCTGTATTTGTTAA
GTATTGTTATGTGACAAAGACAACTTTAAATTATCGCTCACCTATCATGA
AATAATAATATCTCTCTTTTTGTAGGACATCTTGGAAAACAATGAGATTG
AGCTTGACGCTCCTTTCATTCTATCCCTGGTTTACGATATTATTAAGGTA
AGGCTGACTATTTAATTTCTATCAGTAGGGCTGCTGATTGTAGTGCTACT
CGTCGCATCATTTTTTGGAAAATTGAGTTATGACCATACCGATGCTTTAC
ACCCCATTTTTTACCATTTTTTTTTGTGGCTTAAATCCATCAAAAACCAA
CCTAAAGTGGCCTAATTTTAAGCTTTTAGAAAAATAAGAACTTTTCACTT
TTACGGGTAAATAAGCCTTAAGTCACATCGGTTTAGTGCAAAAAAGCCAT
TAAACCAGTGTGGTAACAATTATGGACCCAAGGCTTTTTTAACACAAAAT
ATATTTCAAATGTTAATGGTTTTTCAGGATTTAAGGAAAAATAATAAGTC
GATTTTCTTGAAACAACAAAAATGGACTTAAAGCTTTTTTATTTTGATGC
AACGTACTGGTCATAAAATTTCAAAGTATTCTGTTTCATAAATACCTATG
AACTTTTAAAGCGTAAGAAGACAGGGTTCGAGTTTGAAGTCCCTACATTT
ACACTCCCAAAAGGGCTACTTAGACTACACAATATATTGACGAACAATAT
TCGACAATATGGTTTGCGGACCGTAATGTACGGANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAAAAAGGAATTTTTTTTCGGTAAACAATCCCCCTATATT
GTTAGAATATTGCAAATCAAGCTGACAATATATTGCGGACACCTTTTCAA
TATATTGCCGGCACTCAGTAATATATCGACAATATATTGCCCGACAATAT
ATTGTGTAGTGTATTTAGCCCTAAAGACAAAGAACTTTAACGTCATTTCC
TTTTATATTTATTACCAGTCCCCTCAAAAGCAGACCGCGCTTTTAAGGGT
TGATAGGTGTATTCATGATAGGCACCATTGTAATGTCTTCTAACATTACA
TCACGGACCCAACAGCTGATTGGTTGCAAGTGACATATTGACTGATTTTA
CGTCACTTGCAACCAATCAGCTATTGGGTCCGTGATGTAATGTTGAGGAC
ATTGCAATGGTACAAGTTATGAATTTGTTTAGTGACGATGAAACATTCAG
TCAATATACAATCATTTCTCTCCACCATTAGGGTATGTTATATCTCCACT
CCACCGACATCAAATCACATGGCAACTTAAAATCATCGAATTGTGTTATC
GACAGCCGTTGGGTGTTGAAGATCTCAGATTTTGGTTTGAACACGTTTAG
AAGTCGTCATGGAAGTGTCAGCTCTTTTGAATCTGAACCAATCAATAGTA
AGTTCTGTTATCTACGCCCTTTGGTATTATCGTCGGTATAATGTTGCCGC
CAAGAGCAATGTTTTGTTAAATATAGTGACTCAAACATAATGTCTTAGAT
TTCCAAAAATCATTATTCTAATGGACTATTTTTATAACTGTGAAATATGC
AACTTGCTCCTCGACAAAGATTCCGATCGCTTCTACGTTCTTGACATCAT
CTATAGTAGAACAAAAAAAAACACGAGTTCTCCGAGCTCCCTGAGGAATT
GCCTCCTATAACTAACTTCCCCTGCTAACTTAAAGAAAATCTTTAGTACA
ATATTATGTTAGATTTCCAAATATCATACATATACCTTGAGAAAGATTCT
AATTGTGTCAGAGTCTCCAAAAACCAAACTTAATGAGATATTTCAATTTT
CTTCTAACAGGTTTATTATGGAAAGCACCCGAGTTGTTGAGGATAGACAT
TCCACCAACGCATCGTGGTACGCAGAAAGGAGACGTCTATTCTTTTGGTA
TCATCTTACAAGAATGTCACACCAGAGAAGGTGCTTGGGGCTCGTACCAG
GACCCTGAAGGTAAGACTTTTAAAGATAGCTATCCAATAGCCACAATTTA
ATGCTTTTTCCGCCCCGATATTTGTAACTTAACTCGGTTGAAAAATGCTA
AATGCAATTTTGAAATTTCAAGATTCTTTTTGATGTATTTGACCCCGGTT
TAACAAGAATTTGAGTTAGTCATTAATAAATATAATTGAATTTCTTTACT
TTTTCTATTTTCTCAGCTATAATCGAGAAGGTAAAGATGCGCCACAATCC
GCCTTTCCGCCCCGTTGTTTCTGACTTAATCAGCAGGGCGGAAGGTTTAC
ATGACGTCATGAAGAAATGTTGGCTGGAAAATCCTGAAGAACGCCCATAT
TTCTCGGAGCTGAGGAAAGATGTTGAAGTCATGATGAAAGCCAACGGAAT
GTGAGTTGATTCGTTTTTAGTACCTTGAGTAACGCTCGTCTTTGAATTTA
CCGCAAATTCGACACCCTTCTTAGAGATCAGAATGATAGGAAGGTCAGAA
TCACTGGCTGACAAAAACCTTTTTTCTCTTTGACTGCCAAGGAAAGATAT
ATAGTTTCAATCGTGATTAATGATATATGNGAGGAAAGATGTTGAAGTCA
TGATGAAAGCCAACGGAATGTGAGTTGATTCGTTTTTAGTACCTTGAATA
ACGCTCGTCTTTGAATTTACCGCAAGTTCGACACCCTCCTTAGAGATCTG
AATAATAGGAAGGTCAGAATCACTGGCTGACAAAAACCTTTTTTCTCTTT
GACTGCCAAGGAAAGATATATAGTTTCAATCGTGATTATTGATATATTTT
TCTTTCTTTATCAGGCGTGCAAATTTGGTGGAAAACATGATTCTGATGTT
GGAGAAATATTCGAAAAGTTTGGAAGAGATTGTGGACGACCGAACGGCTT
CGTTGAGGGAAGAAAAACATAAAGTAGAAGCTCTTTTGGAGCGCATGTTA
CCCAAATCTGTTGCCAACCAACTTATGCAAGGAAGAGAGGTACTTTTTAT
ATTTTAATGCCGTCTTCTGATTTGCATCAAAATCAATTCATTGTAGTTCT
TTATGTTAAACCTTTTTTAAAACGCCTCAATCTCTTAGTGGCCGGGTAGC
TCAGTTGGTAGAGCATTCGCCTTACATTCTAAGGGTTGTGGGTTCGAGCC
CCGGTCACCGTCGATTCAGCGAATGAGTAGCTTATTAGATTGGATAATCG
GATCTAGGCGATACGTTACAGGGAGCTAAGATCTCTCAAGTTTGACGCAA
ATAGGAATAGGGATAGACTCCCTCACTCCCGGCTCCGCCGGCAGCCACCA
GATGAACATACTTACTTACAATTTCTTAATGTCGGCTCATCTGCTCTTTT
GGACCTGTTTTTGGTCACTAGTTTGTAGCCTTTTAGTTAGAACCTCGATA
GTTCAAACTTTGTTGGAGATGTTACAATCATTTTTCATTCCCATTTCTTT
AACCACAGGTCGAAGCTGAACTGTTCGAAGAAGTCTCAATATACTTCAGT
GATATCGTTGGCTTCACCAGTATCTGTTCCTCCATCACACCCATGGAAGT
GGTCAATCTTCTTAATACTCTCTATACCATGTTTGACAACATTGCTAGAG
ATTATGATGTTTATAAAGTAAGTCGATCATTCGTTTTCTTTGTTTTTATT
AGCCTGTACCACCGCGCCCACAGGCGTTTATCATATTTTGAAAAAACTTG
CCGTGTGTCGGTTGGTTTTGGTTAGCGAAATTCTTTGTCTCAGTTTGTCC
CAGTTTTCTGGGACAAAATCCTAAAAAACACAAGCGTGGGAGTGCTCTTT
TGAAAATGAAAGATATTGCATCGACGCCCCACATCCGTGTCAATTCAATG
TTAAAAAGCTTGTGAATTAAGATTGATGAGTAAGCAAACGATATTACTCG
CATTTAAAAACACAACCTTTAAGACTGCTCTTCTCCACATACTTAGGTTG
AAACGATCGGCGACGCATACATGGTTGTGTCTGGACTTCCCATCCGAAAC
AAAAAACAACACGCAAAGGAGATCGCTCTCATGTCCCTCGATATCTTACG
TAACACGAAAACATTCAAAATCAGACCTAATCAACAACAAATCAAAATCC
GGATTGGACTACATACCGGCCCCGTTGTAGCTGGAGTTGTGGGAACCACG
ATGCCCAGATATTGTTTATTTGGTGACACGGTGAATGTGGCGGCCCGTAT
GGAATCTACTGGCGAAGGTAAAATGTTCTTCTTGAATGTAAATTTCAAAT
ATCTACTTCATATCTAATTAATTATTAGCCTAGTTAACTAAGCCCGTATT
CACAAGGCTAGATTCAACACACGGCTAATGGCATTATAGCATTTTCGGCG
CTTTAAAGATTATATTTACGGATTTTAAGTTTGCCTTTGAATACTGTTAT
TCAGTCACAACTAACCATCAGATTTATCCTAGTGACTAAATCAAACTAGC
TTAGCTTTCTAGGCTACTTATTATCTCTCCTCTTGTGTTAAACTGTCTTT
TATCATTTGGGTAATGATTCATTTACAAAGTTAGTCAAGCTCATAGAGTC
AATGAAAAAAAAACACTACATTCTGTTCTTTAACTATAATCTGTTTTTAT
CGTTTTATATTGTTGGGAATGGTTTTTTTGTAATTGAAAAAATGGCTTAA
ATCTTAATTTTCTCATTCTATACTTAAAACAGCACTTCGTATACAAATCA
GTGAAGAAACGAAAAACACGTTAGCAGCATCATCAGCCTCCATTGCCAAC
GAAGAATTTCTGGTAGAGCCACGTGGTTTCACAGATGTTAAGGTATGTTT
TCCATATATTCCCTTCCCCATAATTGGTCTGTTTTTTTTCCTACCCTGGT
TGTTGTTTCTCGCTAAACGATTTTTGAAAGTGTTTCGCCTAGAAGAAGAG
ACAATGTCTCAGAATAATGTTATGTTTCCTATAATTTTATTTTTTTGTCT
AATTTTTTGAATTTGACCTTTTTCTTGACTTGAATCTATCACGTTTTCAC
TTACATGACAACCAATCCCCAATAGGCTTTATTTCTATTATTAAATTCTA
TTTATCACGACGTATTACTTTTACTTTACGACGTAAATACTTCTCCATTT
TTACATACACTTGACTCTCGCTTATTCGAATTCAAAGGTGGTGCTCGAAT
TACGGAGAGCAGATTCGAATTATAGAAGGCATTTTACTAAGGATCCTCCT
TGACGGGGACAGTGAATTGGTTCGAATTTTTGAAATAGTCGAATAGTAGA
AGTTCGAATTTAGGAAAATCTACTGTATATATGTATTCATATTTTCTTCA
GGGTAAAGGCAATGTTCAAACGTACTGGCTAGTTGGCATGCGTGAAAACC
TGACTCAGCACAATATTTTAAAACGAGACCAAGACTCTTTATATAAACAT
AATACCTCGTCATCTTTTCAACGAATCATTAGAGACTCACCGAAAAATTC
ACGCCACAAGAAATTACATGTCACGCCCACGGGTACTGATTTTTCAAGGA
CACCGCCCTTAAATCCGCCCTTGAGTAAAGAACAAAGAGCGAAAAACTAT
TTCAAATCACACATGTTACCGATGTGCAAAAAGATCGGGAAAAATACACA
AGTGGAAATTTCGGACTATAATAATAGCGAAACGCAAAACCTGATACGGG
GTTCACATTTCAACGGATCACCGATCGGTGTTGAATACCACAAGCGAAGT
GAAAATGCAAAATCACATGATTCGCCAAGACCAGTATGACACATGCATTT
GATTTTTTGAATTATTTTTTTGTTGCTGTTTGTTTCATATTGATTTTCTT
GGAAAAAGGAATTCATTTCATATTTTTTCTGCCCTTGCTTGAATGCTGGT
TGATGGCATCTTGGAAATTTTTTCATGAGTTATTTATCGGCCTTGCTTTG
ATGTTGATTTACAACAAGCTGGTAATGACGTCATGTATTTCGAAATGGAG
ATGGCGTAACCATGATGTAATTTTAATGTAACTTGAATGGCTGGTTGATG
ATTTTATTAGTTATTTAAAAAATGCAAAACATGATTTGGTTTTATGATCC
GAAATTTCTTTTACTTGGATTTTTTATTGACCAGACTAATATTTTTCCCT
TTAATTTTTTAAAGACCTTTATCCACGACTGACTGCCTAATTTTTTCTCG
GATTTCGATTTTTATTTTTAATGAATCTCAAATTTTCAATTAAAACTGAC
AATTTTTATGGATTTTTAAATTGCCAAATTCCTTTAAATAAGATCTAGAA
AATCGAAGTTTGACTTAAAGTTATGTAAAAGTATTCAAAAATTGAAAATA
ACCTAATAAGTTTTTAAATACATTTAAGCATTCATTCCAAAATACATTTA
TTATACATTTTCCTGTATTACTTATTTAGTCATGATTTTTAGATATTTTT
TTTCTGTCTATATTGTTCAAAGAATTAGTTTCATTTTTAAATGCACTTAC
GCTTAGGATTCTTAGCATATGCACCTTTTTACCTTCTGTTTTCATGATAT
TTTAGTCTTTCATATGCATATTTAGGAAAATGATTTATCACTCGTTAAGA
GTATCTCGTATCGACTGCTTTCCATGGGAATAATGTAAAAATATTCAAGA
CTGAAGAAAAATTTGCCATGATTCTCAGAGACTTTTCTCGTGTGCTATAG
GATCTTTTTAGTATGGCTACATACACCCCCTTCTCACAGACCCGGTAGGA
TTTTTCTAGCCAGTGGGGATAAAAATAACGAACTGAATCTCGATGGGGAT
TGATATTCCCATATTTTTCATGACTGGGGATTTCAATTCCTTTGTTTTTA
AGTCAGAAAATTCAGTGGGGATGGAAAAAAAAAATATTTTGCAGTGAGGA
TTGGTTTATTTGATTATTTTCAGCGGGGACAAAGATTGGAGGAAAATTTT
CCACCGGGGACGATTTTTTGGCCAGTTTTTCCAGAGAGAAGAAGGGGGTG
TAATATGGCTGATACAAAAGTATGTTTTCCCTATATTACATACAGTATAG
GTTTTTTCATATTTTTAGTTACTTTTTTTAAGGCTCGGTTTCTCCCCCAA
AGTTCACCAGACTTTACTCAAACCAAGCTTGTTTAGTTAGTTTCCATTTT
TGTTTCTCCGGAGCACATACATTTTTAAAGAAATTTTCAATAGTTTTTTT
TTTCGCCTCTTTGTATATACTGTTGTTATATTATATATGCTTGTAAAACA
ATCATCCTCACCAGAGTTTATTAAACTAAAATGAAGAAATTATTTCCCTA
AAAACTATATTATTATATTAATATTATTCTATAATAACATGCGAAATATT
GTACGACTTATTTAGATAAAAAAGAATCGATGAAAAAGTTTTGACAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022633TCONS_00022633Clytia hemisphaericatranscript
TCONS_00022632TCONS_00022632Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022633-proteinTCONS_00022633-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000429supercontigsc0000429:16978..26775 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05	1.8	1.08	0.7	12.05	8.62	14.26	14.82	9.3	9.95	8.83	8.25	22.3	23.18	6.33	8.2	8.73	10.93	33.29	34.5	7.93	9.11	4.7	6.77	11.42	15.23	10.6	7.92	6.34	5.51