XLOC_012792 (gene) - C. hemisphaerica

Overview
NameXLOC_012792
Unique NameXLOC_012792
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000432:157936..168179-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012792 ID=XLOC_012792|Name=XLOC_012792|organism=Clytia hemisphaerica|type=gene|length=10244bp|location=Sequence derived from alignment at sc0000432:157936..168179- (Clytia hemisphaerica)
GCCCAACTGAGATTTTACTTTGATTTGATTACCGAGCTGATTTTCTAAGT
TAGTTCGTCATTTCACGTTTTTTTTGTCACGAGAAGAGGTAGAAACAAAA
CAGAGAATATAAGGAACAAGGGAAGGGAAATAAAACAAGCACAAGTTAAA
GAAAGATTAGGTATGGTTTATTTCAATTATAGTTTGTGAAATATTTTTCC
TTGGTATTGTTTTTTCCAAGATCTTCAGGCAGGACGACAGGAGAAGTGCT
TATTCCCATATTCTTGATTTGATGTTTGATTTCCTCCTACATAACATGGG
GTATCGAAATTTAATATATAACATCTAGCTACCATCAAAAATTCAGTCAT
ATCTACAACCTTTTTAGTGTATTATTTTGAGCAAGCTTTGAGATTTCTGA
AAACTGATGAAAGCAGATAAGGAGATATGTCGACGACCCTCGACATGGCC
CGAGAATTCTCGGGCCTCTTCTGGCCATGTTCGGGCCGAGAGACCCTATC
AATTCTTTTGGCCCGAACATGACCTGAGTCATTCGGGCCATGTTCGGGCC
TCCTTTTTCATAACGCTTTTAAGCCTGTCTGGCTGGGTCCATTGAGTCTA
ATCTAAAAGTACGGCGGAGTAGGGGCGAAGGANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAAT
TGATTCAGCATGTCCAGTCAAACAAAATAGTACAAAATAAGATTTGTCTG
TTTTGTTTATATCGCTCAAAAAAACTTTACGAGCTTCCCTTGGACACGCT
TCAGTTTAAAACCAGGACCAGTTTACTAGCAAAAATATTTCCAGCCTAAG
TATATTTATAACTATGTTTTCATACCAAATAAGACATTTAATATTTATAT
GAATTTACAACATTCATATATTTAATATAATTAAGAGAACCCAAGTTTTT
CTCAAAGAAAATGTTAAAAAAATTCAGTCCTGAAAATGTTTTCAAAAATT
AGTCCGCATGTGGCCCGAACACGGCCCGAATTCTTGGGCCATACTCAGGC
TTTACGCAAATTCCAATAAAAGTTTTGGCCCGAGAATTCTCGGGCCATGT
TGAGGGTCGTATATGTCGTTGTTTAGTTTTGTTTTCAACTACCACAACTA
CCACTGATTATTTGTTGAAATACACAATAGCAAAATCGGGTCCTAAAGGT
AAACAAACTTACAATCTGGGGGTTTTGCTTTTTCCATCCCTCTGTCTGTG
TTTCAGCATTGATCCGGGGGGCAGTCAGGCAAATTGACCGACGGTAATGT
GCGGCGGTTAAGGGTATGTTTTTCAAAATATCTATATAAGTAAGGGTGGA
ATTTTCAGCAAATCTGAGAAAAATTGCAAATTTTTGCTCGAAAATCTTGA
TTTTTATTTGCTCTAAAAGAGTTTAAAATTTGAAAACATGTACTGTAAGG
GTACCGTAACTTGGTCTAATGTCGACATCCCTCCTCTAATTTCAACACCC
TTTTTATCAGCTGAAATTGATAGAAAGGTTGAAACTGTTTTTCTTTGCTT
AATGGTCAGATAGGAATTATTCTTTTTCAATCAGTGAATCTAAGTTTTGA
AAACGAAAGTACTTCATAGCTCGAGATAGCAAAATTTTCAGACCATGGTT
CTGACCTTTTTCTTAATCAGCATAAGATTTCTGATCGATTGGTATATAAT
ATGCAGGGTTTTAAGCTCAAAAGATATTTTTCTTAGGCTAGCAGAGCCTA
AGAGCCCATGTGACGAAAGAAAATTTTGAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAGCCAATCAAATGTTACAGCCACGCAAATTTGGAACCAAAAGTAGTCA
TTTCAAAAAATCAAAATCGAAAGTGCTTCATATCTCCAGATAATGAAATT
TTCAGACCATGGCTCTGACATTTTTCTTATCAGCATAAAATTTGTGATCG
ATTGGTATATAATATGTCTATGTTTAAAGTTAATAAATTTTTCAAGCAAG
AGGGCTAAAAAGGGTTGAAAATCTAAAATCCGCCATTATGGAAATTTGTG
CCTGATCCAAATAACGCCACACACGTTTTCTGACTCTTCAAGGACTTTAC
TTTCATGATCAAAAGAAAAAAATGACTATACGCCGATGCACATACGGGAC
CTAACTCAGCCCCTAGAGTAAAAGAACAAACTTGTTAAAATGGAAGAGGG
TTAAACAGGCGGGTCAAACTGAAGTAACTGGGGTAATTTATAGTTTCGAA
GGTCACACAACTATCGAGAATATAAAGGAGGTCAAAGAGAGACAGGGGTG
CCTTTTAATAATAATTATAGAAGAGGTCAAACTGAGGCAGGGTTGTCTTT
TTTACAAGAAAAATAGAATTATAGAGGAAGTTGTATTGGGGCAGGGAGTC
TTTTCGTTAAAACGAAAGAGTAAAAACTAAATAAATTGAGCACAAAATGA
AGTCCACAAAACAAAGGCAAGGATTGGTCTTACTTCAGAAATATAAATGG
TTTATAATATAAAAAGAGGCTCTTTTTTGGGTCAGCCGTTTTATTACAGT
TGGCTAATCTTATTAAAAGGTACATAATTCAGGTCTTTAAATTTATCTTT
ATAAATGAAAGCAAGAAAGAAAAAAAGGAAGAACTCAAAATAGGTTNATA
AACCTAGGGGGGTTCATACCCCTCTGCAAACTATGATTTTATAGTTTTGA
TTCCCATTGAAAAATCATATTCTGGCTTTCATTTTACTAGATGCTCTTTA
AGAGCTTTATAGCTAGCCTGATTGTTTTGATGTTAGTAGAGTCAGTATAG
TTTTCAATTACCGTGAAGTCGAGTAACTTGCATCAGTGGAGGGAAACTTG
CATAGCCATCAAATGACCGAACCGCCAAAGTCATTTGATTTGAGTGAATG
AACAGCATATCAAAAAATATACGATTTCTCTTTTGCACCGAGTAGGCTTT
TAAATCGAAATATGAAAAAAATACGTAGTGGAACACACGCGAGTCTCTGT
GCACTCTAAGAGGAACAAAGAGGTATGATTGATAAACTTGGTGGAATAAT
CAAAACAAATTTGTTGCCAAAGAGATTTAACAGCTAAGTGAAAATACAGA
CCAGATATCAACCAGTCCGATGTTTTGACCAATCGTCCCAAGTTAGAGCA
GTTGATGGTAGCATGCAATATCGCTGCGAGTCTTTCCTTTAATAGATAAA
ACTCTTCTGTGCTTATTTTAGGGGGAGCGAGTCACTTTGCAATTTTCTGG
AAACAATCATCCCAATACCATGAAGTCGGGTAACTTGCTTCAGTGGAGGG
AAACTTGCATAGCCATCAAATTACTGACCAATCAAAGCAGCAAAATTTCA
AAACAAATGAACTACGCAGCTCTGCTCAGGGGGGGGTCAACATTTATAAT
ACCAACCCATGGCCCAAAAACCTGACTTTTGACCTTTTGAGCTAAGTTAA
CACCACCACCCCAAAATTGGTATCGATACCAACTTGAAAATCATAATTTT
CAGAAAAAAGGGAGACCCACCCCCTTAATTTGGTATCGATACCAACATGA
CTTTGACAAAATATCATGGGACCCAACCCCTAATTTAGTACCAATACCAA
TCTGACAAATTTGAGTTTAAAAGCTGTTTAAAGGGAACCCACCCTCTCCC
ACACAAACAGGGTACTAAGAGAAACTTCAAAAAAACTCATTTTTGAAATA
CTCTTTCTTCATCACAACACAAAAAATGTCTTATGCTAAAATAGAAAATG
ACTGAAAACTGACAATATAATAAAAACAAACCCAATGAAGCTAGCAAAAT
CAATCTGAATCAATATTATATGAATATAATTGATGTGCAAAAACTAGGAG
AAGCTATTATTAGTACATAATTTTAGAACAGAATAGATTCACTCATTACC
AAATATCACAGAAAAAATGCTTTTGGTTCAGGCTTGATCAAAAATAAAAC
TTGAAAATATCAAAAAAGTCCAAAATAAACAAACTTCAAAGTCATTTAAA
CTTATTACTCATTTACAGTCAAGACGGCTTAGGGAGCCCTTATTGAAACA
TGAAAAAAAGGCGCTCATTGAGGCCCCAAAGCAGTTTGCGTGATGATGTG
ATAGGGTCTTTTTTGTAGCGTAATTACATGATTTGGAATTTCTTTTTGTA
ATTCCGTGATCAGGGATCAAAACGTGATCAGGGATCAAAACGTGATCGTG
ATTTGAAAAATCTTTGACCTGTGATACTTGATTCGGATTTTTTTCAAAGG
AATACGTGATTATCTATTTTTTTGTTGATTTGCATGATTGTGTATTTTCA
ACTTGTTTTTCAAATTCTCACTTATTTTCCATTTTGGCAAATAATTTCCC
AAATTCATCAGTTTAAAAAGAATTCTTCCCATATTTTCTGATTTTGGAAA
AACTTTTATTTTTTCACATATCCAACTAATGCTATTGCAGCTGACAGCAA
AATCATTCTCCAGGGTTATCTCACACATTAAAATGATGTCCTATTTCAAC
AAATGTTCACCTGGAGCAGCCAGGGTTGCTGGTATACTTAAAATTGTGTT
TATGTATCTGTGAGAATGGGCTGAAAGTGTTTTGGTGGGTAGTTTTTTTA
GTTTAGGTAACATTCTCCTAAGCTTATTAGCAAGATTACTAATTGCTTTA
TTCCTCTCGCTAATGAAGAAAATGTGTAATATCTAAAACTGCAATATTTG
TGATGGGAAAAAGTAAGAAATTTATGTCCAAAATTACCATCCCTGATATC
AGCTGCTTGGGGATTCTCAAAAATACTTGAAAAATAAAAAGTTTTTCGGT
TCAGAATGATATGACGATAGGAATCTTTTGATGACCTTTCAGGTACAAAG
GACGCCATGGGTGAAACAAGCGATGGTCAATTTTTGAATTATGATATTTC
GTACAGCTGGTAAGCATTTTGTAGATGGATTCCATTTTTTGATTATTTTT
TTAGAGTGCTTTACTTTTCTTTACTGACTTCATAAGAGCAAACACAAAAT
ATTAAGCACCTGCATAGTTTTAGTTTTTTAACCCTTTGCTCAAAAGTCTC
AGTGTACAAATTGTTTATCTTTCAATTTTCGGGATTCCAAGATTCAGCAA
AAATTTTGACAGGAAAACGGTATTTCGAACCCCTACAACCCCCCCCCTAA
TAATGCGCTGCTATTTTGCTTTTATTCTAGCAAAAGTCAAAGCAGTCCAT
ATGGAAATTTGAACACAATGAGTTTTGAAGGTAAATATGAAGATAAGTTT
CACATCACATTTTAAATTTCTTAATTCAATTCAAAGTAATGATTGAAAGT
TCAAATTCTACCCTCTTTTAATTTCCAATTTAGATTAGCTTCCGCGTTCT
TCAATAGAATGTTTAAGTTTTTACAAAATATTTATTTTGATTTACAAACT
TTTTCAGTAACTAAATTAATGGAGAACGTTAATTATTTATTGGACCCACC
TTGGAGGTCCTTTAAATTAACCTGTGTCCTTCCGTCTGTCTGTCTGATAC
AAGCTTTTCTCAGAATTTGCTCGTTTGATTTCTCTGATTTTTTGCTACAT
AATGCAAAATAGTAATGCGGAGCCCAATTTTTAATTTAAAAAAAATTCTG
GCTTAAGATGCCAGAATTATGCTGTAAAAACTGTTTTTTTGGCATTTTTT
CCAGATTTTCTCATTACATTCTTAATGTTTTTCCAGCCAAAAAATTCCAG
AAATATGCTCATGCTGTTTCTTATTTTATTTCATTTTCTAATTTCATTCT
ATATTTATCTTTAGGTAGGTCCAATATGCATTGTGCTTGTTTACCTCCAA
ATTACATTAGTGTAATCAGCCATTTCTAATTTCGATTGACTATCAGAGCT
ACTTAAACTTAAATACCAAGGCTGTGCTGTATTATTCTAAATCAAGATTC
GTCCATTTTTAAGGTGTCCCTAGGAGGAAAACACGGGAGCCACAGGAGGT
TGATGATAATGAAGTTGTTGTCTACAATCACGAATCACTTACTTCATTGT
TTGCAAAGGTAAGCTCATTCAATTCCAATGAAAGTTACGATTTTATTTGA
ATTTTCCCACATTATTCCCATACATTTTCCCACATTGTAAAAGTTTTTGT
CAAAGACTTATACATGCATTGAATAAATTGAAACAAATAACAAAAATGCT
ACTTATAANTTTCCCACATTGTAAAAGTTTTTGTCAAAGACTTATACATG
CATTGAATAAATTGAAACAAATAGCAACAATGCTACTTATAGATAATGCT
AACAAATTACTTTCTTTCATAAAATCTTTAGATTAATCTAACAAACAAAG
TCAAAGTTGGTCAAGGTCAGTTTGGGGAAGTGTTCGTATGTAAATCAACT
GATGGACAAAAATATGCATTGAAAGAAATAGATGTTGCAAAGAATGGTAT
TGAAGATTTAAAGAATGAGATTGAAATTCTTGGTGGTTTGCAGCACGAGA
ACATTGTCACTTTTGTTGATTCTTTTCCTAATGTTGAGCAGTTGTCTGGT
GTTTCAAAAGCGNTTTGTTGATTCTTTTCCTAATGTTAACCAGTTGTCTG
GTGTTTCAAAAGCATTTATCTTGATGGAGTTTGTACCAGGTATTATTGAT
TGTTCTTAAGCCATGTACGACTAGTTTTATTTTAAAAATTTTAATAGCCA
AAGTTCTATTTTGTATACAGGTGTCAGACTGCTTTTTGAATTGAAAATAT
TTTATCAATACAAAGGCAACATGAAAATTTGAAAAACATTTGAAGAAATA
TACTCTTAAAGTTAAATTTTTTCTTATTAAATAGAAACGCTGACATCATT
TTTGCAGAAATACAAGGACTGGCGTAGTAACGAGAGATTCATTGTCACTT
ACATACACCAGCTATTGAACGCTGTTTACTTTGTGGTAAAAAAATTCCAT
TTGTAATTTTAATTAAGGTTGTGGGTTCAAGCTCCACTCAAATTGACCAT
TAGAGCAAGGTCCCCTTTCCCATTGTAAATTAGCCTAGAGAACAGACAGT
CTAGGTGATACAAGCATTAATATTTATTTATTTTCTAGCATTCAAGGAAT
ATTGTTCATTGTGATATCAAATGTGATAACATTTTATTTGATGATTCCAA
AAAACAACTCAAACTATGTGACTTTGGTTTGGCTCATGATCTTCGGAATG
GAAAGATTAACCGACCGAATAGGGGTACCATTAATTTCATGTCACCACAG
GCTATCAATCCACCCAAGACCGGCTACGGTAAAGAGGTAATGTCTGGTTT
AATAATATAAAGGAATTTATATTGCGTTAACCATAAGAAAGTCCAAGTGT
GTTTTCAAATAAATTTAATTCCTTTTTGATTTTGCTGAATTGTACAAAAA
AATATCAAAAACTCATTAACATGTATTTATCGTTTAACATCTTTTCTAGG
CTGATATTTGGAGTTGCGGATGTACGTTTTACGAAATGATGACTGGATAT
CCACCTTTCTTTGAGGTTCTGAATTATATTCTTAATTATGTACAAGCAAA
GCTCACTTTACCTCTATGCGAACTAAAAGCTTTCCTCACTTCTTGGGGGG
CGTTCAGTACTAAAATCTCAGATAATGTATATGAATTGTGTACTGCAAGA
ATTCTTCACATACCACCACCCTATTTTAGAGATCGAAGTGGTATTTTAGC
ACCCATGTACTACATTTTTGTTGACATTTTGATTGGCCTATTTTTTTCTT
CTCCAGGATTAATTTTGTCTTCTCTGGACAATTTTTTCAAACATAAAATT
TATTTTTTGGACAAATTGATACTACTACTACTATGAATAAAGCTAACTGA
AAGACATTAGACTGAAAGCAAAAATTAATTGAACAAAATTTCATTTTCTC
TATTTTTGTCTGGATCGCACTGTTTTGGTATTTTAGTACCCCGTATAAAA
GGATTTTAATTTTTTGAGTAATACAACCACTTTTTGAGCAACATGATGTG
TGAGATTTTAGTACGGACCACCCCCTCCGGCACTACTTATTATCTGAATG
AAATTCCCTGGAAAGTCAAATCAGAGATATGTATTCTCAATTCCAATCTC
AAGGTGCAATTTTTTAGAATCCCAAACACATTTTCTTAAAGAAATCTTGG
TATTAGATATGATTCCGCTCATATGATTTGATAATGAATTAAGAATTTGT
TTATATTCTCGTTTAGTTTGAAAGTATGACAATAATGTTCCAAGTTGGAA
GTGGGAGACTCAAACCAGAGCCTCCGACTGGCTGTTCTCCGTTATGTCAT
AATTTTCTGATGAGGTAATTACACTATTTAAACTTGTCTTGTTTTTTTTT
AATTAGAAACTTGTTTATTGCTTATTCTCTTAAATTCTTTTGACATAAAA
TATTTTATTTGGCTGTTTTAGATGTTGGGTTCAAAACCCTGCGGAGAGAG
CAACAGTGGAAGAGCTGTTGACACATACATTCATTCAAGGAGACAAGAAA
AACTATCCCACTGAATGCTCTGAATATGAAACCGATGGTATGTTGTTTAG
AAATTTAACATCTGAAAAGCTGTATCAGGAGACCAAAGACAAAGGTGTGG
TTTTTTTTAATCACCCTGTATATGATACTTCATGAGCATCGATACTACTC
AACGAATAATAGGGTTCTGACAAACCGTGGAAAACATTTCATGGAAACTA
AGGGAATTTCTTTTTAAACTGTTTATCACTCAAGGAAACAATTTCATCTA
TAACAGAATAGCTTGATATTTAAAATCTTGACCTTCTGCGCCAACAACTA
TGACCCACACAGGTCTCTTGGATTTCATTTGAAGGTGTTTTGTTTCATAC
TTTAGACATGGATGTTGTTATCGATGAATTCGAACATTGCTCTTTGGCCC
TTCACAACGAAACTAGGGATTGTCCTGAAGTCAACGGTGACGAATTTGCC
ACCTGTTTTGCATTAACTCCTGCTGCAAATCATGATATTGAAGATTTGCC
TTCAGAAACCTTGGTACTCCAACAGAGGTTTGCCTTACTTTTTTTTTTTA
ATGAGACCATTCTCGGATAAAAAAAGAGGGCACATATTCGTTTCAAGTAT
TACAGCTCCAATCTCTACCAGTCAAAGAAAAGAAAATTCTATTTTCTTTT
CAAATCATGTCTGTAGGATGGTAATTCTCTCATATTTTAAAGCCTTTTTA
ATCATCTCTAATGCTAATGGTCTAATTGTATGTATTTTTCTACGGCCACA
GATAAATCAGTTTTATAAATGGGTATTCCCTGTCATTTATGTTTTCCCTT
TGACAATGTTTATAAGATACTCAAATTCAACAATTCTTATAAGAAAGAAA
TAGATGATTTAATGGTAGTTTTTATGTTATTTTTTTAGATGCCAGGAGGT
TGATGCTGAAAATGATGCTGATTGAAGAAATTCTTTAATTATTTACTAAA
TTTTTTAATTCTCATACAATTCTTTTAATTTTCTTTGGTAATTCAGTATT
TTTACTCTTATGCTTATATACGATTCATCTCTCTCTCTAAACAAATTGCC
TATTAATGTTATGTTTTATGCAAGTCTCGAAAATTAGCTGATCCTTTACT
TTACAAGGGCCATTAAACATGCTTTGTCAAGTTTTTTGTGTTTGCATAGA
TCGTTTCTAGCGTACATATTTCGCGGTGAATTTTAGTATCCTTTTTATAG
TATTATGCTGTCATTTTATAGATTATGCTGTATTATGTCGTACACTTTTA
TTGATAGATCTTTATGCTTTGTAGTAAATTTTCTCTTCGACTGATTTGTA
TGCATTTTTTGAAGAATTTCTTCTGTTTTGTAAACAAGGGAATTTTTATT
AGTGAAATACATACATTTAGGATATGTTTCTTCTGTTTGACTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022779TCONS_00022779Clytia hemisphaericatranscript
TCONS_00022778TCONS_00022778Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022779-proteinTCONS_00022779-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000432supercontigsc0000432:157936..168179 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.37	7.15	2.35	2.37	22.7	17.83	31.75	33.66	115.69	124.93	106.5	114.16	168.22	146.44	155.54	137.42	103.59	106.15	183.1	230.13	87.86	85.22	86.95	94.78	129.37	131.44	205.93	215.21	159.88	161.63