XLOC_013024 (gene) - C. hemisphaerica

Overview
NameXLOC_013024
Unique NameXLOC_013024
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000444:158603..160410-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013024 ID=XLOC_013024|Name=XLOC_013024|organism=Clytia hemisphaerica|type=gene|length=1808bp|location=Sequence derived from alignment at sc0000444:158603..160410- (Clytia hemisphaerica)
TTAGAAACTGAATACCTTTGATGAAGATCTTATGTATTTTAATGTAATTA
TACACATTTCGATCATCTTTTGATGCTGTCGAAGTATGGATCATAGGGGA
GTTTGGGAACATTGAGGAGTACGGAACATAAGGGAGTAAAGAAATAATGG
AAATTTAGAAATTTGAGGGGGGTCCGTGTTTTCGTAAAAAAGAATGTTCT
TCAATAAAAGTTGATTTATGTGCCTACATTTATATTTAAAATATATTTCC
AATTAGACAATTAGTGCCCTCACCATGCAACTGAAATTGAATGAAAATGA
CAATGAGGGAATATTGTATTATCAAACATTTTCACTTTTTGTGTATAATA
TCTTTTTTTTATCAAGGTTTAGTAAAATCTAATATGCACCAAATTTAATA
CCTTTGAAAATGGCAACAAAACCCAATTTTCTGAAAGTCATCATTCTTGG
GGATGGTGCGGTTGGCAAGAGTGCGTTGATGAACAGATTTGTCAACAACA
AATTCGATAGTCAGTCTTTTCACACAATCGGTGTTGAATTTTTGAACAAA
GAAATCACGATATCGAAAGAAAATTATACACTTCAAATATGGGATACTGC
TGGACAGGAGCGATTCAAAAGTTTAAGAACTCCTTTTTATAGGTAGGTCT
TACATCAGAAGAGTTCTTTTTATTTTCAAAATGTAAAGCAAGTCAGCAAG
TAGATACTTTGTTGATTGTAACTATTCTCAGAAGAGAGGGCTTCAAAGAA
AAAAGGTTTTACAAAATTTATGTACTGAACTTTGGTTCTTTCAGTATTCT
ATAGACTATGTTTACGTGCAAGCTCTGCTAAAAGGCTCATCACAAGCTAC
TTTAAGACTCAGTCAAAACTTAATGTTTTGAGCACCCTTGTGATAACAGC
AGTTGCTTACCCGGACTGTACGAAACACGTGTCTGAGGATAGTTATTTCA
AATCTAACAAATATTGTTTTTTATTTTCAGGGGCTCAGATATTTGTTTAT
TGGTATATGCATTAGATGACGAGCAAAGTTTTTATAATTTGGATATTTGG
AAGAGAGAATTTTTGTATTATGCTGACATAAAAGACCCTAACAGTTTCCC
ATTTGTCTTGTTGGGAAACAAAAGTGATATTGGTGAAGGCCGGTATGAAG
TCAAAGAGGATGACGTAAAGAACTGGTGCCAAGCCAACGGAAATATAAAG
CACTTTAAGACAAGTGCCAAAGACTCCATAAACGTTATACAAGCTTTTAC
TGCTTCTGTTGAACGCTGGATAGAGTCAGAATCGAAGTTAGATGGACAAA
TGAAGCCATCACCAGGCTATACAAAACAAGTGGATTTAAATAAACACCAA
CGTGAAGATAGTGGAAGTTCTAGGTGTTGCTAGAAATTGTTTTTAAATGT
CTTATAATGTCTCTTTATGATGATTGCAGCACAAAATAAGATCCTTGTTC
AGTCAGCTCGTGACAAGTCTTCTAATGGAACATACATGGATTTAATGAGA
CCCAGTAATGCTGGCTAAAGCATTTCACAGTTTATTTCTTGCACTGAGAC
GCTAGAAACATGTCTTTTTGGTGGAACTCTTTAAGAGGTCAAACTGTCAG
ATTGAAGAGACTCTTCCTTACGATGTCAGTTCAGTCGACACTCGATAATA
ACAAAATTGATATCTGTTATTTTCGGTTTTTACCCTTGTCTTATGATTTT
AGTAATAGATTATGATGTATGAATTCATTTGAAATACTTTTGGTCTTAGT
AGCATTAGTAAGCAGTGGCGTTGTGGCAGGGGGGGCCGGGGGGCCATGGC
CCCCCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023169TCONS_00023169Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023169-proteinTCONS_00023169-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000444supercontigsc0000444:158603..160410 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAB9Bras-related protein Rab-9B Homo Sapiens
RAB9Aras-related protein Rab-9A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
62.63	58.82	20.87	14.37	25.72	18.59	22.1	25.16	31.34	26.55	28.02	18.7	19.82	16.61	27.59	31.32	28.7	27.02	21.62	35.65	32.51	31.01	59.23	55.93	22.66	29.03	45.87	35.57	55.43	51.95