XLOC_013040 (gene) - C. hemisphaerica

Overview
NameXLOC_013040
Unique NameXLOC_013040
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000446:62611..69762-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013040 ID=XLOC_013040|Name=XLOC_013040|organism=Clytia hemisphaerica|type=gene|length=7152bp|location=Sequence derived from alignment at sc0000446:62611..69762- (Clytia hemisphaerica)
GAGAGGGAGAAAATTTGTTTTAAAGATTGAAAGAAACATGTATGTAGAGA GATATAAAAATTAAAACAAAATGGCAAGTTTTAACCCCAAACAATTTGGT TACAATGTTACTTTCGTTGGGGAGGAGAAAAAAACATCTGTACTTAATTC TGATCAAAAGGAGTTTGCTGGAGGAATCGATAAGGATGACATCACATGCG CAATTTGTCATTTGATTTTGAGGGATCCTGTTCAAGCAGTAGACTGCGGT CATCGTTTTTGCAAAAACTGTATCAGTCAATTTCATCAAACCAAGTGAGT CTTTTACAATAAACTTTATCGGTAGAAGATTCGTCGGTAAAAAGTGACAC AAAAATCGCTTTGTGACGAATTTTAATACCGATGACTTTTTTAAACGAAT GATCGATTGATGTCGAAAAATTATTTCTAAAAATGATTCTAAGCATAAAA ATAAGCGTTCAAAGTTTTGATTGTTCTTATCCTCAATTCCTCTGAAAACC GATGTTACTCAATGTATAGGTTTAAAAAATCGTCGGCAAAATATCCGTCA ATAACAACTGACGAAATTTCCGACAAGTGACGAAATTTTTTAACGATAAG ATACTTGTTGTTGATAAATAAAACACCGAAGGTTGTATCGTTAAAAGTCG AACCGCTTTATGAAGGGGTTAGCTCTTATGCCTCCAAGTATCAAACCAAA GCCCCAATGAAGTTATAAATAACATGAGACTGACAGATAAAACTTTGTAT TGAGGAGGTCAATTTTAATAGGAGTTTTTTTCTTCTTTTTTCTAGTCCAG CAAAATGCCCAATGGACTGGAAAACTATTCAGGTATATCTTAGAAGCCTT TTTGAGGTCAAGTTTCAAAATAATTTTTGCAATTGTTTCTTGGTGTTTGT ATAACATGATGAATATATTTTAATGCCAAAAGTTTCCTGCTAAATAAACT CGAAAAGTTAGACTAATTCAAGACAAACTACCAGCGGAGAAGACAACCTG ATCTTTAGTTGGCAAAAAAAATCACAGGAAATGTTTTTGAATGAAATGGC TCAAGAAAATTTTGACGAATTAGCCAAAATAAATTCCTAGCGGAAATCTA GTTTCGCGAAAATTGAAAGGCCATCATCTGTGAAAATTGAGTTGAAATCA AGTGAAATACTGGGACATTTATTCTTTTTAGATTTTTCCAGATATTGGCA AGAAGCGAGAGATTTTGAGTTTACAAATTCGTTGTCAAAATCACGAAGAA GGATGTGATTGGCAGAACGAGATCAGAGAAGAAGAGGTAAAAAATAAATC TAGCAAACCTTTAGTATACTGTAAACGTTTTTTTATAAAAACATTTTTTA AGCCTTGGGATGTTTTTATTTTTGCCATTTTTTTGAGTATTTCTGTCCAT TTTCCTAAGAAACTCGGTGCTTTGAGAGTCCGCATAACCTTAAAATGTTC TTAATTTGTTCTTAACAATCTTCTTATATAGTTGATTCTTAAAAAAAAAA ATGTATTTCAAAGACTCCAAACAATCATATCATCAGTTGTTAACACCTTT TGCATATATTCCCATATTAATTGACTGGAAATTAAATGGCAGCAGCTTCT TGATGTTTTAGCCCCCACCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCC CCCCCCGCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCGCCCCC CCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCC CGCCCCCCCCCCCCCCCCCCCTTGGACAAGAAGGCCCCCCTTCCACGATA GACTTTTATTCAATATTTTAATAACATTTCTTTCCAGAACCATTTGCAGA ATTGTGGATATGAGAGAGTTTCTTGCGAATTGAAATGTGGCGAAGATATT TTGCAGAAAAATGTATGTCATAAAAAAAAGAAAAATTTTATTTTTAGATA ACTTTCTCTTCTATTTGCCATTTTTACCAAATCCCTGTTCCATTTTTTTA GGCGAACCTTAACTTAAAAAACTATTTCAAGCTTAGCTTCTTTTAAAAAC CAAGCTATTATTTTCCACTCATTTTAATAACAGAAATTTGTTTGATATTT AGATGCAGAAACATTTGGTGTGGATTTAAAAATTATGGTTGCACATACAA GGTTAGTAAGTTTTCGATCAGAAATTATTCCACAGGGTAATTCTCAACTT CAGTTGAGATGATTGGTGTGGTGAGCCTGTCAATAACTGAAGCATTGTCA ATTTTCGATTTAAAGTTGTGCATTTTAATGTACGAATATCTTATCGGACT TTATACGCTTCCCATTTTTTTTGGCATATTTATCAAAGTTTGTAAACTTC AAAGAGTTACAGGCTGTTTCATTTCTTTTTAGGGAGCAAGATTGTCATTG GACGAGCACAACACTAAATCACAGTACAAACATTTGTCCATGAAAATGGA ACACGAAATCCAAAAAGTAAAGAATGATTGCGAAGAAAAATTGAAGGAAA AAGATCAGGAGATTCAGGACTTGAAAGAAAATTTTTTACGAAATAAAAAT CAATTGATGTCTGAAATTTTGACAACACCGCGATGCCCATACACTTTTTT GATGGAAAATTTCAAAACAGAGTTTGATAAAGCTAAGATTTCAAATGACA GAATTCTTTCACCGGGATTCTTCACAGAGAAAGGATATAAAGGAGGCTTG TGTGTTTATCTAAATGGTTACGGTAAAAACACTCATATAACTGCTCGCTT TCAAAATATAAAAGGACCGTATGACGATTTGTTGAGATGGCCAATGCCTT GGAAATCATTCAAACTCACTCTTCTAATCAACGATAAAGAAGTTGCGAAA AGGCCACTTATGAGTACGGATGCAGAAGGGATATATAAAGACCATTTCAC ACGACCAACTGGTGATGATAGAGTCAAATCATTGGGGATATCTAAGACTT TTGCACACGAATTAGTAAAAGAAGTTACTAATAATGACAAGGTTGCCATA AAATTCGAAATGGAATGATAAGGAAGAAAAAAAGAAATAAATTCAAATTA AAAGACTAATGTGGACAAAATTTGAAATAAGGATAAGCGAACAAGACGCC TGAAAATTTTCAATTGCGGTTTACGCAATGGTGAAGATATGACCATGAAG CTAAAATTAAAAGACAAAATTTTAGAGAAGTTGTAGTAGAGTATAATCTA AATAAGTTTGAGTTTATCGACCCAGTGATATCNAACTTCTTTTATTCGTC TAAATAAGTTTGAGTTTATCGACCCAGTGATATTCATATTGGAAATTTAT CGTGGCTTGGATCACGAGATTTACGTTTGGCTACGTTTCGAGAGATTCTT CTCCCATCATCGGGCAATGTGGAGGTCAAATACATTTTTTAAGACAAACC ATTTCTGCAGCTAGCACCATGTAAAATAAGACATTTAACTTTGTGGCGTC TTAGTTAATTTTTTTTTCAAAACAACTTTTTTCTTAGCACCCATTTATGT CATCAACGATTTATTCACCGTTGGAAAAATTTAAATATTTTCAAATTTAA TTTTTTTTGAAAATTGAAATCGAATTTAGCATTTAGGATGTTTTGTTGTA AAAAATTATGGTCAATTATGGACAAAAGGTTTGTAGACTTCTGCCATAGT TGCAAAATACTTCAACATCGATCAAAAACAAGTTCCCAAGAGGTTCTGGG TGCTTTCCAAACCCATCCAAAGCTGTTCAAAGTCTTTCAAAGTCACCCAC TGCAGTCTAACCACAAGGACTTGATTAACTGGCTTACACCAGTATCAAAA CGCTGATTTTTTGCTTGTGGTTCTCTCAAAAGCAATTCAAAAGCAATGCA ACGACTTCAAAAGTGTTTTTCTTAACTTCCATCCCCTTTAAGACACATTG AAGAGTCATTTTACACTATTTCTCATCATTTTTTTACTGAAATTTCATTT GTCTACAACCTTTTGTCCATGATTGTAAGTTATCGGTTCGTTGCTATTAC ATTAGTTCGTATCAGACGAAGGGGCGAAATAAAAAGCATGGGTTTGGGCT ATGAGATTGAATTTCCCAGCTCCAAAGGACAGTTGAAAGCACAGCCAATC AAATTTTGTTATTCTTTCACTGATCACACTTTCTTAGAAAAAAATAAGTT CTTAAGGTTGTTTTAATTTTTAGTAGGTGAAGACAGGGCTAAATTCGAAT TTCCTACTGTGCGAATTAATGGAATAGTACTGCCTTGACTCAGCTACAGT CGTTCTCAATCTCTAAACCAACCTTTTAATTTTGTGAGAATTTTAAAGCT TTACATACATCTACAAAGAGATGATTAGCCAGCAAATCAAAAGAACAGTG GAAATCCAAAGATTTCTTTTAGGTAATCAACTATTATTCTGGACCAAGCT TAATTATGATGAGATCAAATTAAAATCAAAATGATGCTATATATATGATG ATGTATGATATGCTTGCTATATTGGTTTCGAAGTGATCTGAGAGTTTTAT GTGGAATGTAATCCATAAGAAAGTAAATACATCGAGAGGGAGAGAATTTG TTTTAAAGATTGAGGGGAGCATGTATGAAGAGAGATATTAAAATTAAAAC AAAATGGCAAGTTTTAACCCCAAACAATTTGGTTACGATGTTACTTTCGT TGGGGAGGAGAAAAAAACATCTGTACTTAATTCTGATCAAAAGGAGTTTG CGGGAGGAATCAATAAGGATGATATCACATGCGCAATTTGTCATTTGATT TTGAGAGATCCCGTTCAAGCAGTAGACTGCGGTCATCGTTTTTGCAAAAA CTGCATCAGTCAATTTCATCAAACCAAGTGAGTTCTTAAGGCTTGGAGAC ACAAGAAGTTTTATTCGCGTTGTTGCAATACAACATGCTCCATCCCACCA ACCTGAAACGCTTTCTCGTGCCTCCACCCCATTCTTCCTTCTACCAATAA AAGTGAAGTCTCACTTTTGTCCCAGGGACAAAATCAGTCTTTTGGGTATT TCCCTCACTTTTTGTCCCTTGAAACAGAAAAAAAACAACCATGAGAAAGC GTTTCAGGTTGGTGGGATAGAGCATGTTGCACTGCACCAACGCGAAAAAA ACTTCTCGTGTACCCAAGCCTTTACAATAAACTTTATCGGTAGAAGATTC GTCGGTAAAAAGTGACGAAAAAATCGCTTTGTGACCAATTTTAATACCGA ATGGTCGATTGATGTCGAAAAATTATTTCTAAAAATGATTCTATAAGCTA CTTTAAAAGCGTTCAAAGTTTAGAATGTTCTTATCCTTAATTCCTCTGAA AACCAATGTTACTCACTACGTTCGGGCTATTTTGAAATGTTTTCAATGAA CCTCAGGGTTATTAATCCCAAATCACCCTCTAAACCATGTTATTACTAGT ACAAATAGGTTTAAAAAATCGCCGGCAAAATATCCGTCAACAATAACTGA TGAAATCTCCGACAAGTGACGAAATTTTTTAACGACAAGATACTTGTTGT TGATAAATAAAACACCGAAGGATGTATCGTTGAACGTCAAACAGCATTAT GAAGGGGTTAGCTCTTATGCCTCCAAGTATCAAACCAAAGCCCCAATGAA GTTATAAATAACATGAGAGTGACAGATAAAACTTTGTATTGAGGAGGTCA ATTTTAATTGGAGCCCTTTTCTTCTTCTTTTCTAGTCCAGCAAAATGCCC GATGGACCGGAAAACTATTCAGGTATACCTTAGAAGCCTTTTTCAAGTTT CAAAATAATTTTTGTGATTGTTTCTTGGTTCATATAGAACATACTTTAAT GTCCAAAGATTTCCTGTTAAATAAACTTGACAGGTAAGGCTACTTTAGGT GTACAAACTTTCGCGAGCAGAAACTTTCGCGAGGACGAAAAATCGCGAAA TTCACGACATTTACTTTCGCGAATTTAACGGGAAAATATTTTTCGCGAGC ATAAACTTTTGCGAATCAAGACGTAAAATTGAGAATTTTCACATAAAAAA TGGCTTAGAAGGACAAATACTTCTTGGATTGGCTTGAAACATTTGTCCTT TGACTTATTAGTCTTTTTAGCAGGCAAAAAAGTACCATAAAAGTTACATT TTATTCAAAGTTTGAAGTTTTACAGATTTTCTATTTTGTCCAGAATTTTT CGCGAGCATAAACTTTCGCGAATGGCCCTTCCTAGAATTTTTAAATACAT TTACCTTTGCAAAAAGGGCCAAAACTCGCGAAAATCACGAAAATTTCTGT TTGCGAAGATTTATACGCCTAAAGTAATCCAAGACAAAATACAGGCAGAA CATCCAGTTAAACTCATGTTTTGATGTTTAGTTGGCAAAAGAAATCACAA AAAATGATTTTGAATGGAATATCTCAAAGGAATAAATTTAGAATAAATTC CTAGCGGGAATCTAGCTTCGGGAACATTGAAAAGTGGCCATTTATGAGTA GAAATCAAGTAAAAAACTCGGACATTGAAAAAAAATATTATTTTTAGGTT TTTCCAGATATTGGCAAGAAGCGAGAGATTTTGAGTTTACAAATTCGTTG TCAAAATCACGAAGAAGGATGTGATTGGCAGAACGAGATCAGAGAAGAAG AGGTAAAAAATAAATCTAGCAAACCTTTAGTATACTGTAAACGTTTTTTT ATAAGAACATACAAAATTTTTTAAGCCCCCAAGGCTGTTCTTATTTACGC CATTTTTTGAGTATTTTTGTCCATTTTCCTAGGTGTTTCAGAATCCGCAT AACCTCAAAATGTTCTTAACTTGTTCTTAACAATTTGGCCATCGAAGCCT TATCTTCTTATAGAGTTGGTTCTTATAAAAAACGTGTTATAGCACAGTTC TTATAAAAACGTGTTACACTGTCCTTTTAAACAAGCATATCATCAGTCGT TACACCTTTTGCATATATTCCCGCCTTAATTGAATGGAAATTAAATTAAA GCCTCTTGACCTTTCAACCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTCCCCCCCCCCCC CCCCCTTACGCAAGGGGGCCCTTATGCCACGATAGACTTCTATTCAATCT TTCAATAACATTTCCTTCCAGAACCATTTGCAGAATTGTGGATATCAGAG AA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023189TCONS_00023189Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023189-proteinTCONS_00023189-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000446supercontigsc0000446:62611..69762 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.13 0.47 0.2 1.85 3.52 5.83 6.29 1.74 2.48 0.98 2.38 7.59 7.03 2.58 2.68 4.03 2.75 6.58 7.04 3.19 4.09 1.47 2.29 3.25 5.67 0 0.2 1.08 1.24