XLOC_013065 (gene) - C. hemisphaerica

Overview
NameXLOC_013065
Unique NameXLOC_013065
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000447:130927..135272-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013065 ID=XLOC_013065|Name=XLOC_013065|organism=Clytia hemisphaerica|type=gene|length=4346bp|location=Sequence derived from alignment at sc0000447:130927..135272- (Clytia hemisphaerica)
CAAGATTTTTGTTTTAAATTGACTATTTTTCTCAGATTGTTAATTTTCAA
GGGTTTTCAGAGGTTCACCGTGTGCTTAAGAAAATTATGACCATCTGTTA
TCAGGTTACGTTTGGCTCGTTTAGGTGAATTGTATTGGTTAACTCATAAT
TGATTATTTGGGGGTTGGCCAGTTGCATTAAAAAAACTTCTTTGTCAAGG
ATATAATAATTGCAGAGGTGACAGATTTAGATTTTGGGTGTTAAGTATTC
TAATGTGTACAATTTTATTTTATTTTCATTCATAGTTTATTTTAATAAAA
ATTGTCCAAACAAACAACAAATCTGGCACCTGTCGCAGTGAAGAGTTCTG
CAAGATTTGCACCCTACAGCCAAACCAAAGGGCCCTCCATGGATGTGAAA
ACTTTTGACGAGAAACGAAACTTAATAGTCAACTATTTACCATCAAATCT
GACTCAAGATGAAGTGCAACGTTTATTCAGTCGTATCGGCCCTGTATCAA
ATTGTAAATTGATTAGAAATTTTGAGTCTGGTCAAAGTTTGGGTTATGCT
TTCATTGAATATCCCTCAGAGAATCTAGCTCTTGAAGCAATCAATACTCT
AGATGGGACCAAAATGGAAGGTAAAACCTTGAAAGTCAGCTATGCACGTC
AGTCTTCACCTGATATTAAAAACTCGAATGTTTATGTAGCTGGACTACCT
GATCACATTTCTGAAAATGATCTCTATACACTTTTTACACCGTTCGGTAA
AATCATCACACACAAACTTTTAACAAACTCTGACAAAACTTCTAAAGGTG
TTGGTTTTGTTCGCTACTCTTTGAAATCAGAAGCACAGAATGCCATAGAG
TGTATGGGTGGCAAGGTACTAGACAAATGCAAAACACCATTAACAGTAAA
ATTAGCTATCCCACCAGTATCTAAACAACAAAATTCTCTATTGGCATCAA
CTTCGCAAATCAATGCAATGGCTGGTATCCCAGGTGTCAGTGCCTTGAGA
GGTAGCCTACGTTTTAACCCTTTAGCACCATCAAACCAAGCTATCACACA
TACAGGTCAAGTGTTGTCTGCTATCTCATCATTGGAGCAACAAACCTTAA
GTCCAATTGCTAGCCCTGCGCTCATTCAACTCAAAACAACACAACAAGTC
ATCCCCAATGCCACAACAGCGTCTCTGACACCTGCTTCTGCTTCACAAGC
TTTCACTATTTATATATACGGTTTACAAGTACATCATAATGAGCTACACT
TGTATGAGCTGTTCGCACCTTTTGGTGCCATCTTGAATGTTAAACTGATC
CGTGATTTAAAAAAAGAAGACAAGCCAAGCAAAGGGTATGGCTTTATCAA
TTTCCGTAAATACGAAGACGCCCTTGCCGCCATCAACTCCTTAAACAACC
AAGTATTAGAAGGCAAAGTTTTGCAAGTTTCTTTCAAGAATGCAGCAACT
ATGGGTCTTGCAACAGTCCAACAGCAACACCAACAACAAGCTATTTTATC
ATCAGCTGGTCTACAACCAAGTCTACAACAACAGCAACCACAATTCCAAG
CCAGGCCCCACATTCCTCACCACCACCACCACCACCACCATCAACAACAG
CATCATCATTTAGCAGCAGCAGGTCTTCCACATCACGATTCATCCCCGTT
GTTCTCCAATTTCCACCACATGAAATATCCAAATTGAAAGTGTGACACTA
ATGGTTGTTTCATTACAATAAGAAACACACAAAATACGAGACCATGTTTT
TTTGAGATTTCATTCATGATGGTTTCAGGGTAAAGAAGGTATGATACTAT
ACATTGAGGGACTTTTGGAGTAAGGTGTAACTGTTACTAAACTTATACTT
TGATTTTTACAAATCGTTACGAAGCAAGGTTTTGCTTTTATAAAGTTATA
CTTTAAAAGTTTGAACACACGAGATAATTCATTTATTTACTTACTTCATA
TTAACATTATGATATAATTTTCTTGAGTTATTATTTTTTAGATAGTAGAT
AATTTTTACTTATTGTTACATTTAGGTATTGTAGGTATTGTAACTGGTTC
TAAGTTAACTTTTATTATTCTCTTGATTCGTTATATATTTTTCAGGCAAT
CGACTAAAAATGATGATGAAAGATGAAAATTTGCTTAAATTGATTACTTC
GTTTTTCTATGTATTATTGATATTAATTACTTGCACTTCCATGTTAAAGA
TATGTTTTTGCTCTGCATAAGCGCAGATTCGATAAGAGATTAATGTAATT
TGCTGCATTGTTTTGTTTCTGTTCGATAGGTTTGGCCAAACGAAATCATG
TAATAAACAAAAAAAACTTTTTACCATCTTCCTCTTTGTGGATAATCAAT
TTATGATGTTAATTACATTTTTCCTTACTTTTATTACTAATTATTATTTG
GTCCATTTTATTTCATGCTATTGTTAGTTATTATTAGCTTCTTGTAGTAT
TGGCGTGTGTGTATTATTTTTTCCTTATCACATGTTTATTTCTGAAATAG
AAAATTTTGATTTTACATACTGACTTTATTCCATTTTGTTTTTTTACTTC
ATATTATTTTTGGTATTCGAAGAAAGAACCTCATTCTCTCATTTTTTATC
TTGCCCATTACAGTGTATGAAATATTTTAAAGCTATCACTGATTTATTTA
TGACTTGTGCCCCTCTAATAGTTTAATTCTACTGGTATATTATCTTCATT
ATCTTAAATTTTTGGGATTTTATATTTTAGTGCACTTGTATCAAAATTAA
TTTCATTTTCTTATCCATCCCTACAATGTAGTAGTGTCGCACCAAGATCA
CTTTATCTTTAATTTGAATTTTCCTTTTTAAATTTTCGTCTTCTAATTAT
ACTCAATTAATTTTTTGATGAAGCTATAATTATTGTATCCTTTATGAGTG
TATTATAAAGGGTTGTTATTTGATAAGGATACTATCCAGACAAGTTACTA
AAAGGATATGATTTGTTTTGCGTTTTGCTATGATATTGACTTTGAACGTT
TGATTTATTCATTTTTTTTTCATTTTTATTTCATTTTCATTTTAGTACAA
TTTACAACAAGAAAATGCATTTGAAGCGAATATTAATCTACACTGGACCA
GGTACCGAAAAGACGAACATACTTCACCGTTCGTTGGCTCATGTCCTCGA
TACAATCAACCCTCATCATAAATTCCATGTCGACCTCATCGAGGAAGCTA
GCTCCATATCACCAGCTTTGAAACGAGGCGATACTGAATTATTCATTCTG
CCTGGAGGTCGAGATTTACCATATGTCGATCACATAAAGACTGATATTAT
TCGAAACATCAAAGATTACATCCATACAGGAGGCTCTTATCTTGGGATAT
GCGCTGGTGCTTATTTTTCATGCCAAGAATGTATTTTTGACAAGAATGGC
CCGCTAGAAGTAGTCGGCCCGCGTGAAATGGCTCTTTTTTCGGCAGCCGG
AGTCGGTCCTGTTTACCCTGGATTTAAGTACAATTCTGCTAAAGGTTCAA
TCATGGCTCCTTTAGAGTTCCATTCAAAATCTAACAACTTAGCCTCTTGT
TTTGCGTATTTTAACGGTGGAGGGGCATTCCAGGCTAATATTGAAGACAC
TGATCCTAACTACGAAATTATATCTTCTTACAAAGACTTGAGAAACAAAG
CTGCTATTGTGTATGGGTCAAAAGGCCTTGGGAAGGTCTTGCTGTCTTTT
GTTCATCCCGAGATGAGTTATAAATTCCTTGATAAAGATAACTACACAGA
ATTGCAATGGAATGATATGGTTGCTAAGGATGATGGGCAATTTCAACTTT
GGAAATGGATTATTAATAAGCTTGTTTCTTTTGATTAAAGGGACCTTCAA
TTTACCTCTTAATTGAAAATTGTTTGAATAATGCTCCCACATTGAAATCT
TCTATTACATTTAGTGTACTATGAAATCCTTTTTAAAATATATTTCCTGA
AAAAAAGAAAGATCATTGAGTTTCTCAGGGTACTGTGATCCATGTTATAC
TTATAGTTTAAAAAACATCTCAATATCGTCCTATGATACTGCTGTTAGTA
TTTGTTACCCGCAGTTAGTCTAGCGAGCTAGACGACTAATTCAGACATAG
TAGAAATAAAGCAAAAGGTAATGGAGGTAAAACAATTTTAGTTTATACCA
CGAATTAAATCCTGTAACAATAATCGTATTATCATATAACACCTATACTA
CACTGTATTACATGCATTATAGACGACTTCAGTCTAAACTGAAGTCTGAT
CAATTCTAATTTTTGGTATCGGCTTCTTCTTAGTCTTGGATATTAAACAT
TTTGACATTCTTTAATTGTTTTTGTTATTCAAAAAAATTAGTTCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023227TCONS_00023227Clytia hemisphaericatranscript
TCONS_00023226TCONS_00023226Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023226-proteinTCONS_00023226-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000447supercontigsc0000447:130927..135272 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.68	15.39	10.75	9.25	37.42	30.69	36.19	39.05	16.79	23.71	13.86	9.01	9.76	9.57	11.53	13.04	23	17.6	4.31	6.08	12.05	13.21	20.91	21.64	16.16	19.09	11.59	6.51	14.83	16.28