XLOC_013110 (gene) - C. hemisphaerica

Overview
NameXLOC_013110
Unique NameXLOC_013110
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000450:195436..204404-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013110 ID=XLOC_013110|Name=XLOC_013110|organism=Clytia hemisphaerica|type=gene|length=8969bp|location=Sequence derived from alignment at sc0000450:195436..204404- (Clytia hemisphaerica)
CTGACAACAACCACAATTCATCTTGTAAGTTACTGTTGCCATGAACTGTG ATTTAATACATTTTTTTAACAAGACAGTTGGTCTTGGATAAAGTTAGTTA AATCAGGATAAATATCACAAGTTTAGTGCTGTGTTTGTGGGTTTTCTTTT TATCAAATTTGTTCAAACTTCTTGTATGTAGCATTTTCTTGTGTTTTTGT TTGGCAAAACTTCTTTTGAGGGGTGGGAATTAAAAGCCTCAAGTTTGGCT CCGGAGTTTGGTTTTTTAAACCAGATGGTACTAATCAATAACTTTGATTA TCGAAGTAATCGATAATTATTGAAGTAATGAAACGACCACGTCGATTGTC ATTGATTAATTTCTATTATAACTTCACAATAACCATTGATTTGTAGAAAA ACCAGAAACACTGACCTCAAACCAAAGCACAAAAATAAGTGCAAGGCATA AGAATGACCTTCAGTAATTACCACGCCATTTTGTGTGCGTTTTAAGTATT AATTCGTATCGTGCATTTTGATTGGTTGGAGAAAACAAAAGTGGTTTTGG TGTCATGTGAATCGCGCATTTTGATTGGTCTAGATAAACTCGATTTCAGA TTCTGCCATGCTGCTGCCAGGAGCAATATTAGATACAATCAGTCTAGACT TAAACTCCTATATCAGCATTAGAAACTCCCGTAGAATCGTCTAATATCGA CATGCGTCTTGTTATTTTACATAGCTGTAGGCTGGTCTTCGAAATAAAAA ATCAAACATACAGTAAACAAATACATACCAAAGTTATCAATTAATCACTA AATTGTACTCTCCCTATCACATCAAAATTTGCAACAAAAACGAAAGTAAT CTCTTCTACCGATTGCTTTGTGGCGCTCCTTGTCCTCGCAGACTGTTTAT TTGATTTCCACCAATAAGATTGCATTTCACACTGCCCTTCTTTTCAGCGC TGTGGTCTAAAATCTCACCCTTCAAAACACCTCTTTTACCGTGAGATTGG GTAACTTGCATCAGTGGAGGCTGGGCAAAATTATTTTAAAGGGAACCAAA AAGTTCATCTGGGAGCTGAAAATCTTTTTTCAGTAAACATTTTCAAATTT ATATGTATCATTTTTCATAGTATCTTAAACTCATTTGCAGTTGTTTAGAG CTACAGCACTTCCGAAACTTGATTTTGCCATTTTTCAGGCTAAAAAGCCT TGAAATTAAAGCTTTTTAGCCTAAAAAACGGCCACAGCCATATCACAAAA AATACAATGAATGCTGCAGTTTTAGTTATTCAAAATCCAACATAGGCCAA CAATTGATCAAGAAAACTCATTTACAGCATGATTGGCCTTCCCTGGATTG AACGGTTGAGGATTTTATTTTCCAAAAATCTTGGTTACGGAATGACGGAA AAATTAAAAATGCTGTAAAGTTTTAAGGAAACATTTTTAGAGTAAAATAT TTGGCAAGTTTCTACCTCTTACTGAGTACTTTCAAACCAGGCATAAATTA ATTGCTATTGGGGGAAGACTGGTTTTTAATTGAGAAATCATTTTTGGTTA CGGAATGACGGAAAAATTAAAAATGCTGTAAAGTTTTAAGGAAACATTTT TAGAGTAAAATATTTGGCAAGTTTCTACCTCTTACTGAGTACTTTCAAAC CAGGCATAAATTAATTGCTATTGGGGGAAGACTGGTTTTTAATTGAGAAA TCATTTTTGGTTACGGAATGACGGAAAAATTAAAAATGCTGTAAAGTTTT AAGGAAACATTTTTAGAGTAAAATATTTGGCAAGTTTCTACCTCTTACTG AGTACTTTCAAACCAGGCATAAATTAATTGCTATTGGGGGAAGACTGGTT TTTAATTGAGAAATCATTTTTGGTTACGGAATGACGGAAAAATTAAAAAT GCTGTAAAGTTTTAAGGAAACATTTTTAGAGTAAAATATTTGGCAAGTTT CTACCTCTTACTGAGTACTTTCAAACCAGGCATAAATTAATTGCTATTGG GGGAAGACTGGTTTTTAATTGAGAAATCATTTTTGGTTACGGAATGACGG AAAAATTAAAAATGCTGTAAAGTTTTAAGGAAACATTTTTAGAGTAAAAT ATTTGGCAAGTTTCTACCTCTTACTGAGTACTTTCAAACCAGGCATAAAT TAATTGCTATTGGGGGAAGACTGGTTTTTAATTGAGAAATCATTTTTGGT TACGGAATGACAGAAAATTATCTTACTTTACTGAAATAAAAATTATGAAA TTTTCACTTAACCATATCACCTCAAACATTTTTTAAGCTGATACAGTAAC TTTGTAGTCCAGGGTCTGGAGCTCAACTATTTTTTGCCTTTGATAATCTG ATGGTGGAAAAAATAGAGAAATGGCAGCGCCATCATTCAAATCAGAAAGC GAAGATAGTATACGGCAGACTTTCTGACTAGTAACTTTGTATCAAAATCT AAGCATTTGATCCATCTTGAAAACCTTTCCATTGACCCTATATAGGGTTC TAAAGTTGAATAAGATTTTTACAGCAGATTCTGTTTCATATCATGTGTAC CGCATTCATGATAAATTAAAAAAATTGGTTGAGTGTTACCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGATAAATTTAAAAAATTGGTTGAGTGTTACCAAAAATCTTTTTGA TTTTCTCAAAGTGTTATCGTTGCTATGGCTAAAATCATGACTTTGATAGC ATAATCATTAGTCAGTGTCAATTTATTAACCACTTTATAACAATGCAAAT TTTTGGGTGACACTCTGTTTCATGGAAAAAATGGGCAGTTTTTGAGTTTT AAAATGCCATAACTTTAGTTTCGCTTGTGCTACAGACTTGTATGAGCTCT CATTTTTCAGCATTTTTTATTGTGCATCCTCTGAAATTAAAATCATTCAA TGACAATCTCTACTTTATGCACAATATCCTTTTGAAATCAAGGTGGTCTC TGGTTCCCTTTAAAATAATTTTGCCCGGCTAACATACATACCTCCAAATG AATAACCTGGCTGGTCATTAAAATACAAAATTGAATCAAAATAAAATGGT AGAGTAGAAGAGCTGCAAGCGGAGCTGCGTCGTTCGTTTGTTTTGAAATT TTGCTGCTTTGCTTGGTCAGTCATTTGATGGCTATGCAAGTTTCCCTCCA CTGTGATCCTAAGAATTTATAGACTATTTTTCATCTTTAATTCTCAGAAG AGTTAATAAAGTATCATAAAAATCATTGAATACCGTCAACTGCTCTAACT TGGGATGATTGGTCGAAACATGGGACTGTTAATATCTGGCCTGTATTTTT ACTTACTGTTAAATCGCTTTGACAAAAAATTTGTTTTGATAACTCCACCA AGTTTATCGATCATCGATCATACTTTCTGTCATAACATGTCACGATAATT TTCACTGATAGTGGGTCCTTTTTAACTTTTTTGTTTTTATTCAAAATGAC TGGACGCCAATTGGAGAATTAGAGAACGCCCGCCGCCTAACTGCCTATCG CCCGATGGGATTAAGAAATTACGAGTGTGTAACTTGCCGCGTTAGTGACG TCAAACACTCCATCGTTTTGCCACTAATTTGGTCTTATTCGTTCCAGACA TTCGCGTGTGTTCCACTACTGATTTTTTTCATATTTCGATTTAAAAGCCT ACTCAGTGCGAAAGAGAAATTGTGTATTTCTTCAATACGCCCTTCATTAA CTCAAATCAAATGACTTTGGAGGTTCGGTGAAATGGTGGCCAAATTGTTT TGTCAGATAGTCCAAGTTAGAGCAGTTGACAGTAAAAGAAGAACTTAAAA TCTTCTTAGATATTTTCATTTTGAAAGAAGAGTGAAACATGAGAAAGTTT TTATTGCTTTAATTCAAATGGGGGATTTGGAAAATGTTCTATGTTTGGGT TTTTGCACAAACCCCTGTAACTATGGGCGAGCACCTGATTGCTAAGATGT TGGCTTGAAATCAATAATGAAATCATTGAAAACAAAAGTAAAATCAGCGC GCACTGCAAATCACATAATCTTGATATAGGAGTTTTAGTCTATACTGACA ATCAAAGTTATTCAACAGCCCTCGAAATTCAAGTAAAAGTAAGTCGGCAC GTAAGTGCCGTCCAAATCCGGCCGAAGGCCGGCAAAATTTTGCCGACCTA AGCTTGTTTTTAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCTGAGCTATATTTTAGGTCGGCAAAGTTGTTTAA AGGCTACGGCAATGTTTGTTTTTTTATTTGAGTGCGATATGGTTCTTATT AGAGACTTTCATTTTACAGTTACCGGATAAAAGAATAATAAAATAACAAA ACGAGGAATAAAATTTGCTGACCTAAAAGATAACTTATGGTCGGCTGCCG AGAGAATCAATGAATATGGTCGGCAATGAACTGCCGACTATACGCACTCT TTGGTCGGCTTTTAGGTCGGCACTGTCGAATGCCGACCTGAAATTCGAGG GCTGATTCAATATGATCAAAAATAATCAAAAAATAATCAAACTGATAGAA CAAATCGAAAATGTTGAAGAAAATGCCATAATTTGGAGACAAGTGAGTAT TATAAAAATCGTATCGATAAAATAGATAGGTGGTTAGTGATCACCTTCGA TTATTATATCGGTCATTATTGATTATTCGATCACAATCGAACGTTCAATT AGTACCTTCTGGTTTAAACTAGACATTTTTCAAGCTTGGACAGTCAAGTA ATTCCCTCAATTACACAAATGTTGCCAGTAAACTGTCTACCGGATTATTT CCTGCTGTAATTGATGGATTACTCAACAAGAGTGTTACCAGCAAGATGCC AATAGTTTTGCCAGTATAAATCTGGAAGATTTTTATATACTTATCGCTTG GAGACTCACATTTGTCCTTCTAAGCCAGTTTTTTGTGTGTAAATTTTCAA TTTTTGATTTGCAAAAGTTTATGCTTGCTAAAAAAGATTTGTCCCTGTAT TTTGAATACTGCAATTTTTGGCCCTTACAAAACTTTTCTTCTTGCAAAAG TTTACACACTGTTACACACCTAAAAAAACTTCCAAACTCATTGTTTAGCC ATATTAGAATTTAAACACATGTTAGTAATTGATAATTTGAATTTAGCCTG GGAATGCATGCTCATAATATTAGAAAAAAACAAAAAATACCTCACCTCGC AAAGTTGTTTATAGAGCATGGTGCAGGTAAATTAGTCTGACACAGAATGT TATAAACAGTCTGTGTGTGAACCCTTGTTGACAGATTTCCTGAACTTTGG AAACCCAGGCAAACACACATAATCAACTTACCATAAAAAGTCTTTCACAA GCCCTAAAGACTTTCAAAACAACTAAAAAAAACATCAAAACATCAGCCAC ATGAGTTCCAGTCAACAGCCATTTTGTTTCTAAATGAATCTATGTTTTCA TTTTCATTTGTTTTCCTTTTTTTGCAGAGACAACTTTTTCCATAAGTTAT GTGCGCGCATCGAAATTATAAAAATGCGCGCAAAAGTACTGCTAAATAGT TCGCACAAAATCTGGCCAATCAGACTGAATATTGCATTGCAGGGAAAAAT CTCCCTGCAGGTGAGTTACCTGCGTCAAAAAACAAACAAGCAGCAAAATA TCATAAGCTAGACTGTGGAAAAAGTTTAACGCTTGGATTCCCAGCCTAAT TTGAATTGAAAAATATGTAAGATGATATGACACCATCCTGCATCATTATG TATTTTAAGTCATCAATGTAAATTTCACTCATTTTCAGCATTGATAGTAA CTGTAATAAAGCTTCATAAAAACACACAAAAAAAAAAGTTACATTTTCTA GGATTAGAAGTTAGCGTATTGAACTTGACAGTACCTATCTGCCTCTAAAA GATGGTACCTCTTTACCAATAAAGAAGTTTCTAGCATCAAAGGAAAAAGT TGTTTTTCTTCTCCTTTTTCATTTCCATTTTGAATTATTTTTCTCAAAGA TTGTAGTGCTAAATTATACTTTTCAACAGTAGATATTTTTTTAGAATTGA AATACTAGTTGAAAAATGGCACAATGGCAAGCAAAACAAGAGTTAATGCA CACCTAGGCAAATGGACTCTCGAAAGTTGAAAATCATGTTCTGTGCAATC ATGCTTCTATAAAATTTGAAAGAAGATCTTTTCTTTGCCATTTTCAATTT TCTGAACTATTATAATTACTCCAGATAAATATTGACTATTAAGAAGCTTT GTGCACTAGGTTTAAAAAGACCACTGAATTATTGTTAAACCTTAATTATA AATAATAAATTGCTTTTGATAATTTTAGAGAAGAAAATAATAATGGCGGA TGAAGATGGGGGAGGAGAAGTGGTTGGAAGCTCCTTCATGAACACATTTA TTTTGATGGAAGAACTTCTTGATAAACTTAAACTTTTAGGCTATGAAAAA GAATTCTGCAGAGGTTGGGGCTTCAAAGCATTTTCAAGACATTATTTTGC TGTACCTACGAACCCAGGAGAACAATTTTTTGCTTTTACAAATATTGTAG CTTGGCTGTTAAACCAATGCTCGAAATCTTTTGATCGACCCCAAGAATAT GACGACCCAAATGCTACCATATCAGAAATTCTAGACCAATCCAGATCTCT AGGTATAACAGTTGATTTCCCACCAGCAAAATTGAAATCTGGTCATGGAG AGCAAGTGATTTACTTGGTGAATAAATTGTGTTGCGAGGCTTTGAAGTCT CAAATGTTTTCATGGAAGAGGCCGGAATATATGGAAGAAGAGGAAGCTGA GGAGAATATTGTGGAAGATGACGCAGAGTTGACCATGGATAAATTAAACG ACGAACTGGCTGAAGAAATTGAAGAAGAAGCTGATGAAGAAGAAGCCTAT CTTGATCTCTCTGGTATGAAACAACAAAATTTTGCCAATGATTTTGGTAC GAAACCAGAATCCATGTTGGAATCTAATGTTGATGCAAATGAATGGAAAT TGGAAATTGAACGTGTTTTACCCTTACTGAAAGTTCATATTCGTGCTGAT AATAAAGATTGGAGGAACCATTACGAGCAGATGCAGCAGTATAGTACTGG TATTTCACAAACATTGCAAGAGACTCAAACTCAACTTGATAAGTTACATC AGGAGATTAGTAAGACTCTGGAAAAAGTAGCAAGCCGTGAAAAATATATC AACAACCAGTTGGAAGGTAAAATCCAAGATTTCCGCTCAAAGCAAGATAA TTTGGCTGTATTGAAGGAAAAATATAACCAAAGCAGTGGCGGTGTTACAG AGTTGACACAACAGTTGTCACAAATCACAGATGAGCTTGAGCAAGTGAAA ATACAGATGGATGAGAGAGGAACCAATATGACGGATGCTGGCCCCTTGGT AAGAATCAAGCAAGCGCTCTCAAAACTCAAACAAGAGTGTATAGAGATGG ATTTGGAAGTCGGTGTCTTGGAGCATGCTTTGCTTCAAGGGAAAGTTCGA GAAAAACTTGGATTGGAAGACAAAGTCAATAGAATTAAATCAGCAAAAAC ATCTGAATTATAAAGTTAGAAAAGGATTTTTTTTTTCAAAAATGATTTTT ATCTTTTTTTTCTTTTTAAAAATATGGCATGTACAATAAGTTGTAAAATT TTATGTTAATATAATGATTACTCCAAAAGATTTTTATTTGCTTGGATTTG GAACCAAGACTTGTCAGTTTATTATAATAACCAATAACCAATAGCCAATG ATAAGATACTCTGTATAACTTTAGACCTATGTTTAAAAAGTTAGGCCTGA CAATTCAGATTAGGATATCTTTTTTTTAATGAACGGAACTTTTTAGCAGC TCGACGAAGACTATATTTTTGTCTCAGAGTTTCGTCAAAGAACGAAAGTT TTGGAGTCATCAGTTATCCTTTTTACATTGTTAAAGAAATTTTTAGTAGA GAGCAGCCATGATTCTTTGAAATGTGACCTTTTAATGGAATCAATATCAT AAACAATCTAAATTAGTAAGTTTTGCATAACCTTCTAAAAACTGTATAAC AATCATGTTTGGAAAGAGATTATACTGACCCTACATGTTTGCTTAGTCTA CTATGTCATAACCCTTCTCGTCTTAAACTATAGATTTTCCCCCTTTTTAT TTGACCTTTCAACAAATCGTTTTGCATCCTTTTATCAATTCTACTGCACG ATTTTTTTATAAGAACATCCAAAATATTTGAAGCCTTGGGATATTCTTAA CTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAAACATTTTCATATTTTCG CCATTTGTTGAATATTTTTGTGATATTTTCCTTTGAAATCGGGTGCTTTA AGGTCTGCAAAGTCTTAAAATGTCCTTAACTTTGACACTTTTGCCATCAG AGCCTTATGTTCTTATATAGTTTGTTCTTATAAAAAAACTGAGCGAGAGT TGTCAATAACCACTAGAAAAGATTGTACAACAGCAGGCCAATCATTTCAT CAATTGAAAGATTGTCTTCGTATTTCAACGACATTGAAAAGTGATAACCT AACCTTTGCCTACAGTTCAAAATATAATACGATTTTTTAAAATTCATTAT ATTTATATTTCTTGTAACTTTTTGCCCCTTAATGACTGGTTGTGATTCAA TCAATCAATGCGTTCTGTTTAATCTAAGCTGACAACAAGTGTCAACAATA AAGTTTGTAGTTGGTTTTATCATAAAGAAACTTTATCCTGCCTGCTCACC GTTTTTATTTATTTTGGCAAAAAGTATTATCATTATATGAAAAAAGAGAG CTGTCACATTTTATGATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023317TCONS_00023317Clytia hemisphaericatranscript
TCONS_00023316TCONS_00023316Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023317-proteinTCONS_00023317-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000450supercontigsc0000450:195436..204404 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IFT57intraflagellar transport protein 57 homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
39.13 37.26 26.81 24.7 52.1 38.89 28.24 30.57 16.68 19.6 10.89 9.62 8.83 6.88 7.05 9.54 11.12 9.27 9.15 10.29 9.77 9.39 18.64 17.32 39.31 33.08 24.18 21.37 10.09 10.99