XLOC_013128 (gene) - C. hemisphaerica

Overview
NameXLOC_013128
Unique NameXLOC_013128
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000452:60348..67084+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013128 ID=XLOC_013128|Name=XLOC_013128|organism=Clytia hemisphaerica|type=gene|length=6737bp|location=Sequence derived from alignment at sc0000452:60348..67084+ (Clytia hemisphaerica)
GAGCAGGCAAATCGTCATGGAGTGCTGATGGTAATCTTGGGTTTTGTCCA
ATGGCGAGCTGTGCTGGGGTAAAACCATGTACAAACATGCACGTGTTACG
GATGGATGTGGCATATTGCAGGGCAAGAGATTCCGAGAGCTTTGGATTGT
CCTCTAGCATTTTCTCCATCATAATGTCCATGGTGCAATGATTTCTCTCG
TTAAGACCGTTAGCCCACGGGCTTTATGCTGCGGTATGTTTGATCGATAT
GCCAAATTGATTTCCAAGTTCTCTCATTTCATCATTTGCAAATTCTCCCC
CGTTATCCATATGAAATGTATTTGCAGCTCCAAAAATTGGTAACCATAgt
tcaataatttttgaaataacaaCATGCTTTTCCTTTGATTTGACGAAATC
TGCTCGAGTGTAACGCGTTACCATATCAATGAGGTACAGTATATCTTTAC
CGTTTCTTTCTTTGAGATCAATGCTGACAACTTcattaaatttcatttta
tcgGGAGTAAACAAATTACCGACAGCTGGTTTTGGAATCGATGGTTTGTA
GCGTTTACACACTTCACAGTTCTTGGTGTAATTTTCAAGGATGTTCAAAA
ATTCCTTGTCAGGATCATTCAAGCCACTCAagacttttttcataaattcg
AAAGTTGGATGGCAAAACTGTCGATGAATTTGTTTGGCTGCATGCGTTTT
TTGCTCTCTGGACATTTCTTTGACGGAAAACATAACATCAACTACTTCAA
CGGGAAATCCAGGTTGAATATTAATACACCAGTGACCAGACGGAGCATTA
AACAGCTCTACATTGTTCTTAACCGAATTTATTGTAATTTCTGCAGTGTC
ATCACCTGTATTTATCAAAACGTTCCACTCTTTCATGTTGTGTTTCCCAA
GAAGTAGTGGAAGATCGGTTTCAACAACATCAAATTCGATGAatgttatt
tgatttgaaatcatGATAGGtgctttgattttctttatcgaTTTAAAAAC
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACAAAGAA
GATTCAGGCCATGAATTCTATCACCCAGGTTCATGTTGTATCTTTCCATT
CGAACTTTGTACTTTTCATAGTGCATTAtatattgttcaattgtttgTTC
TTCTTTCCGAGAAAGAGTTCGAAATTCCTTCCATGTTTCAAATGCGGAAG
TATTATCATCCTTACAATAGTAAGTCTCAATCAATTCAATGACTCTCTCC
CAGCCATTatctcctttcatttcattagTATCAAAGGTGTCAAAAACCTG
GCGACGAATTTCACTATTGTTCGGTAAGTGTAATGCCAGTTGTAAACCAT
GAACATTTTTAAGTCCTGCAACTCCTGCAGTAGCCTCTTTCCAGGCTTTC
ACTTCACGTAACCATAAAGAAAACTCCTTGTTTTCTTCGTCCCACTGAGG
TGGGTTTAGAAAACCACTACTTGCCATCACAACCAACGTCTGCTACCATG
AAAGAAATGATACGGATCGAGTGATTGATAGTGTAAAACCCACCAAAGTG
TTAATGTACTACTCTATAAAATATAAACGTAACATAATGTAGAAACAACA
GGAATGTTGACATTAACTTCATTTGTAGTCTGGTAATTAGGAGATTTTAG
GAGAGTTCATCAGTCATATTTTGGAGGGATCCTATAAGATAAACCCAAAA
TTAAAAACGTACCTCCTACTTTCTGGTTTCCTTCCAATTGAATTTCCTTC
GTGTTTTCCAAGCTATCACTTTGGAGCGTCAAAAACGCTAAATTTCTGGT
TTTCTTCGCtgctttttgttgttgttattctaagctatgactttggagca
CCAAAAACGCTAAATTTCTATTCGCGTGGTCGATCTAGCTTAAAAGCTCA
CCCGCAAGGCGATCTATTAGATGTCGCCACTTGGTTGCATCGTCCCGCTT
TTTTTTCTTGCACAATTTTGTGAAAGCTCGATCCCCAGCCGCCTCGTGAA
GCAACAAAGCTCCCTTCGGGAGCAATAACTGATTCTTGTAAGTTTTACTT
TTCTCTGGTAAAGAGTACTCTGTACATTTATCCTTCTTTTATGTTACGGA
ATTGGAAATTGGAAATGGTGCTTCAATCTTTCTTTTACTAACATATTTGT
GATTGACAAAGAAAACCacgagaacttttaaaatctttattaaataAACC
TGACGTAACCAAAGGTGTTTAGAAAACAAATAATATCACattcgcatcca
ttcggatcGGTACCATTACAATTATTTGATTGTTGGAGAAcgaaaataaa
tattcaaatcaaaacagaaaTCGAATCTTAAAAATAATATACGAATGTGA
CTCGATTCGTAACACCCTGGGATTTCAATACAAAACTATTCatttgaatg
ttgtaaattgaaattcgttttgattttttttttactatacttgTGATCAT
GGTGCAAAGAAGACACCAAAACGTCAAacaatgaataaaattaaattttt
agttttcactatttttatcaaaactattCAGCTCATCCATAACCACCTTT
GCAGCGTCTGGACGACCAATCACCAAAAGTGCAGTATATAACTGTTCCTT
CGTAGGGTTTTCCCCCGTAACATAATCATCCAAAAACGATCTTTCGAGGA
TTCAAGCGTATATAACCAAGCTTATCCGCGAGGTGCATGTAATTTGAACC
CAAGTAATCCGTACCTTTATCTTTGAAGATCCAATTTCCAAAGTCAGAAT
CACTGAATATCAATGAAATTGGAGCagcaatttcattttattttatttta
ttttatttaagggctctgaccattgggaatttttttttaccatgCATAAT
ATATCAGTTTCTGCCTGATATAACCAGCAAAACTACGACATGTTATACAT
GTTCTGTTAGACCATTATTCAAGAttctgaaaatttaaactttatgtAGA
AGAAATATCTGTCGGCTTACCCTGGAGTGACATTGTTTATCATATAGATT
CGAATATGATCTCATTCAATCAGGGGTAAACTCTGAAGGGGGACTGACCA
TAACGGCCGACGGAACCGCGCCGATAGAGTATGAAAAGTGGACTCtgtta
aatatgattttttgataaaattatgaCCCTGTAGAACGAAAAATCTTTCC
CAATTTGTAGTAATGTAAACTTGACATGTTTTATGTGTAACTCTTTCTAA
AATCCATGAATCTAAACTTGGTCCTCGTTTGATGCCATGTTGAATCTTTT
TCGCACGCTTTACTgaactttttttgaagttgcTGTAACTTTGTTtgtct
ttgaaatttctctTGTGAACCTTTCTTTCTGCCAAAGATCTGGTAACCCT
ATATCATGCATCAACTTGACTCACCACGTGAGACATGTAAGACAATATTA
TATCATAAAACTCTTCAGTGTCCAAATACTCAAGTTTTAGTATTATATCA
CTATCATAAGAAAGCGTAGAACTTCTTTATTccacagttttttttctttg
tgttttttcaACATCTTCCGTCAAGACGCTTGTGTCGTATTTTCTTAGTT
GCAAAGGTACTAGAACACCCCAAATGTTCAAAGAAATGATTTATGATTTC
AAAGGGTGTAAAGGTTGGAggtatttttcaggttttgacCCACTACATTT
GGGTTAAAACATAGTACTTATGTTGCCTTagcttctttcttctttcttaa
tttttttcacaaaggGAGGGGCGAGAAGCACTTCACATTTTTTTGGGAAC
CTGTGAAAACGTTGTCAATTTAACAAACAATGGATGAGCTTCAaagtaaa
tttcaattttcaaccgTGATTGTTTTTCATTATTGCGCCTCTTTTGATCG
GTGTTTGTTCCGTCTACAGCTTCCTTCATTACATCTTTtggtttattttc
aatattgaaATATGATTCACTTGTATTTTCATTTCCTATTNTAAAGGGTG
TAAAGTTTGGAGGTTTTGACCCACTACATTTGGGTTAAAACATAGTATTT
ATGTTGCCTTagcttctttcttctttcttaatttttttcacaaaggGAGG
GGTGAGAAGCACTTCACattttttggggggacctgTGTAAACGTTGTCAA
TTTAACAAACAATGGATTAGCTTCAaagtaaatttcaattttcaactgtG
ATTGTTTTTCATTATTGCGCCTCTTTTGATCGGTGTTTGTTCCGTCTACA
GCTTCCTTCATTACATCTTTtggtttattttcaatattgaaATATGATTC
acttgtattttcattttctattaCTCCTTACCATCTGAGGGTTTTGTTTC
GGTAGATCTTTGGCTGCATTCTTGTATGTCTTTTAACATTACATTCGGCT
AAAGTAATAAAATCCAATAGTAATAGCGACCGTCTTTCAGCGAAATTGTG
GGGTTTGAGCGTCGTTTTGAATCATGCGATCCATAAATCTCACTGCTACT
TTCTTATTACGTTGATACCGTTCTTGGCATATTGAACATCGAAATTCTGC
ATCTTTTTCATCCAATGGTCGTCATCTTTCTTTTACTAACATATTTGTGA
TTGACAAAGAAAACCacgagaacttttaaaatcttcattaaaTAAACTTG
ACGTAACCAAAGGTGTTTAGAAAACAAATAATATCACATTCGCATCCATT
TTATGATCGGTACCATTACAATTATTTGATTGTTGGAGAAcgaaaataaa
tattcaaattaAAACAGAAATCGAATCTTAAAAATAATATACAAATGTGA
CTCGATTCGTAACACCCTGGGATTTCAATACAAAACTATTCAGCTCACCC
ATAACCACCTTTGCAGCGTCTGGACTACGAATTACCAGAAGTGCAGTATA
CAACTGTTCCTTCGTAGGGTTTCCTTCCGTAACATAGTCATCCAAAAACG
CCTCTACAGGATCTTTCGAGGATTCAAGTTTCTTTATGAAAGCGTATATA
ACCAAGCTTATCCGTGAGGTGCATGCAATTTGAACCCAAGTAATCCGTAC
CTTTATCTTTGAAGATCCAATTTCCTAAGTCAGAATCACTGAGTATCAAT
GAAATTGGACCagcaatttcattttattttaaacttttctcttgacactt
accttgtttacacataaaaataccaaaaaatgcaactgtgttcatcaaaa
ctcgtcacggaatttaagaatatggtaaaacaaNTTGGGAATTTTTATAT
TTACCATGCATGATATATCAGTTTCCGCCTGATATAACCAGCAAAACTAC
GACATGTTATACATGTTCTGTTAGACCATTATTCAAGAttctgaaaattt
aaactttatGAAGAAGAAATGTCTGTCGGCTTACCCTGGAGTGACATTGT
TTATCATATAGATTCGAATATGATCTCATTCAATCAGGGGTAAACTCTGA
AGGGGGACTGACCATAACGGCCGACGGAACCGCGCCGATGGAGTATGAAA
AGTGGACTCtgttaaatatgatttttttatcaaattatgaCGCTGTAGAA
CGAAAAATCTTGCCCAATTTCACCCTCAAAGGTGACAAtggtcgaacgtg
cgcaacgtaCGGGGCTCAACTttagtattttttaaatgatttgtAGGCCC
GGTTATAACATTGATATTCCAAGTTGAGTcgaaattttcagccaaatctg
aaCGACTCTTGACATCTCCAGACTGCCCTGAAGTTGAAGCTCTCTGTTTA
AGTCTTAGTATTAAGTATAAGTTTAAGTCTCTGCGAAATACCTGGGGagg
aaagttaaaattttaagaaagtgAAAAGAACATCTCTAGATATTCACTCA
AGGATGTAAGTATGCAATTACTTCAGTTTAAAGAAttattttacaagatt
tttcaaGTCTGACTGAAGATTGTTGTTGTCTTCATTTTCTGTTGATGATA
AAATCTAAAGGAAAATTTCTTTGTCAATGTATTTTANAAGGATGTAAGTA
TGCAAGTACTTCAGTTTAAAGAAttattttacaagatttttcaaGTCTGA
CTGAAGATTGTTGTTGTCTTCATTTTCTGTTGATGATAAAATCTAAAGGA
AAATTTCTTTGTCAATGTATTTTAACTTTATTAGAATAAAATAGACCATA
GGTCATGGAATTTACATcgtttcttttaatttactttcgTGGACACAAAA
AAATNACTTTCCATAAAAATTTGCCACAGAAATAACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023342TCONS_00023342Clytia hemisphaericatranscript
TCONS_00023343TCONS_00023343Clytia hemisphaericatranscript
TCONS_00023344TCONS_00023344Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000452supercontigsc0000452:60348..67084 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.43	0.36	0.41	0.43	1.91	0.91	0.63	1.02	0.28	0.33	0.56	0.33	0.66	0.6	0.45	0.51	0.55	0.62	0.68	0.9	1.58	1.12	0.38	0.68	0.43	0.87	1.18	1.15	1.13	0.95