TCONS_00023343 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023343
Unique NameTCONS_00023343
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4979

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023343 ID=TCONS_00023343|Name=TCONS_00023343|organism=Clytia hemisphaerica|type=transcript|length=4979bp
GAGCAGGCAAATCGTCATGGAGTGCTGATGGTAATCTTGGGTTTTGTCCA
ATGGCGAGCTGTGCTGGGGTAAAACCATGTACAAACATGCACGTGTTACG
GATGGATGTGGCATATTGCAGGGCAAGAGATTCCGAGAGCTTTGGATTGT
CCTCTAGCATTTTCTCCATCATAATGTCCATGGTGCAATGATTTCTCTCG
TTAAGACCGTTAGCCCACGGGCTTTATGCTGCGGTATGTTTGATCGATAT
GCCAAATTGATTTCCAAGTTCTCTCATTTCATCATTTGCAAATTCTCCCC
CGTTATCCATATGAAATGTATTTGCAGCTCCAAAAATTGGTAACCATAgt
tcaataatttttgaaataacaaCATGCTTTTCCTTTGATTTGACGAAATC
TGCTCGAGTGTAACGCGTTACCATATCAATGAGGTACAGTATATCTTTAC
CGTTTCTTTCTTTGAGATCAATGCTGACAACTTcattaaatttcatttta
tcgGGAGTAAACAAATTACCGACAGCTGGTTTTGGAATCGATGGTTTGTA
GCGTTTACACACTTCACAGTTCTTGGTGTAATTTTCAAGGATGTTCAAAA
ATTCCTTGTCAGGATCATTCAAGCCACTCAagacttttttcataaattcg
AAAGTTGGATGGCAAAACTGTCGATGAATTTGTTTGGCTGCATGCGTTTT
TTGCTCTCTGGACATTTCTTTGACGGAAAACATAACATCAACTACTTCAA
CGGGAAATCCAGGTTGAATATTAATACACCAGTGACCAGACGGAGCATTA
AACAGCTCTACTTCATTTGTAGTCTGGTAATTAGGAGATTTTAGGAGAGT
TCATCAGTCATATTTTGGAGGGATCCTATAAGATAAACCCAAAATTAAAA
ACGTACCTCCTACTTTCTGGTTTCCTTCCAATTGAATTTCCTTCGTGTTT
TCCAAGCTATCACTTTGGAGCGTCAAAAACGCTAAATTTCTGGTTTTCTT
CGCtgctttttgttgttgttattctaagctatgactttggagcaCCAAAA
ACGCTAAATTTCTATTCGCGTGGTCGATCTAGCTTAAAAGCTCACCCGCA
AGGCGATCTATTAGATGTCGCCACTTGGTTGCATCGTCCCGCTTTTTTTT
CTTGCACAATTTTGTGAAAGCTCGATCCCCAGCCGCCTCGTGAAGCAACA
AAGCTCCCTTCGGGAGCAATAACTGATTCTTGTAAGTTTTACTTTTCTCT
GGTAAAGAGTACTCTGTACATTTATCCTTCTTTTATGTTACGGAATTGGA
AATTGGAAATGGTGCTTCAATCTTTCTTTTACTAACATATTTGTGATTGA
CAAAGAAAACCacgagaacttttaaaatctttattaaataAACCTGACGT
AACCAAAGGTGTTTAGAAAACAAATAATATCACattcgcatccattcgga
tcGGTACCATTACAATTATTTGATTGTTGGAGAAcgaaaataaatattca
aatcaaaacagaaaTCGAATCTTAAAAATAATATACGAATGTGACTCGAT
TCGTAACACCCTGGGATTTCAATACAAAACTATTCatttgaatgttgtaa
attgaaattcgttttgattttttttttactatacttgTGATCATGGTGCA
AAGAAGACACCAAAACGTCAAacaatgaataaaattaaatttttagtttt
cactatttttatcaaaactattCAGCTCATCCATAACCACCTTTGCAGCG
TCTGGACGACCAATCACCAAAAGTGCAGTATATAACTGTTCCTTCGTAGG
GTTTTCCCCCGTAACATAATCATCCAAAAACGATCTTTCGAGGATTCAAG
CGTATATAACCAAGCTTATCCGCGAGGTGCATGTAATTTGAACCCAAGTA
ATCCGTACCTTTATCTTTGAAGATCCAATTTCCAAAGTCAGAATCACTGA
ATATCAATGAAATTGGAGCagcaatttcattttattttattttattttat
ttaagggctctgaccattgggaatttttttttaccatgCATAATATATCA
GTTTCTGCCTGATATAACCAGCAAAACTACGACATGTTATACATGTTCTG
TTAGACCATTATTCAAGAttctgaaaatttaaactttatgtAGAAGAAAT
ATCTGTCGGCTTACCCTGGAGTGACATTGTTTATCATATAGATTCGAATA
TGATCTCATTCAATCAGGGGTAAACTCTGAAGGGGGACTGACCATAACGG
CCGACGGAACCGCGCCGATAGAGTATGAAAAGTGGACTCtgttaaatatg
attttttgataaaattatgaCCCTGTAGAACGAAAAATCTTTCCCAATTT
GTAGTAATGTAAACTTGACATGTTTTATGTGTAACTCTTTCTAAAATCCA
TGAATCTAAACTTGGTCCTCGTTTGATGCCATGTTGAATCTTTTTCGCAC
GCTTTACTgaactttttttgaagttgcTGTAACTTTGTTtgtctttgaaa
tttctctTGTGAACCTTTCTTTCTGCCAAAGATCTGGTAACCCTATATCA
TGCATCAACTTGACTCACCACGTGAGACATGTAAGACAATATTATATCAT
AAAACTCTTCAGTGTCCAAATACTCAAGTTTTAGTATTATATCACTATCA
TAAGAAAGCGTAGAACTTCTTTATTccacagttttttttctttgtgtttt
ttcaACATCTTCCGTCAAGACGCTTGTGTCGTATTTTCTTAGTTGCAAAG
GTACTAGAACACCCCAAATGTTCAAAGAAATGATTTATGATTTCAAAGGG
TGTAAAGTTTGGAGGTTTTGACCCACTACATTTGGGTTAAAACATAGTAT
TTATGTTGCCTTagcttctttcttctttcttaatttttttcacaaaggGA
GGGGTGAGAAGCACTTCACattttttggggggacctgTGTAAACGTTGTC
AATTTAACAAACAATGGATTAGCTTCAaagtaaatttcaattttcaactg
tGATTGTTTTTCATTATTGCGCCTCTTTTGATCGGTGTTTGTTCCGTCTA
CAGCTTCCTTCATTACATCTTTtggtttattttcaatattgaaATATGAT
TCacttgtattttcattttctattaCTCCTTACCATCTGAGGGTTTTGTT
TCGGTAGATCTTTGGCTGCATTCTTGTATGTCTTTTAACATTACATTCGG
CTAAAGTAATAAAATCCAATAGTAATAGCGACCGTCTTTCAGCGAAATTG
TGGGGTTTGAGCGTCGTTTTGAATCATGCGATCCATAAATCTCACTGCTA
CTTTCTTATTACGTTGATACCGTTCTTGGCATATTGAACATCGAAATTCT
GCATCTTTTTCATCCAATGGTCGTCATCTTTCTTTTACTAACATATTTGT
GATTGACAAAGAAAACCacgagaacttttaaaatcttcattaaaTAAACT
TGACGTAACCAAAGGTGTTTAGAAAACAAATAATATCACATTCGCATCCA
TTTTATGATCGGTACCATTACAATTATTTGATTGTTGGAGAAcgaaaata
aatattcaaattaAAACAGAAATCGAATCTTAAAAATAATATACAAATGT
GACTCGATTCGTAACACCCTGGGATTTCAATACAAAACTATTCAGCTCAC
CCATAACCACCTTTGCAGCGTCTGGACTACGAATTACCAGAAGTGCAGTA
TACAACTGTTCCTTCGTAGGGTTTCCTTCCGTAACATAGTCATCCAAAAA
CGCCTCTACAGGATCTTTCGAGGATTCAAGTTTCTTTATGAAAGCGTATA
TAACCAAGCTTATCCGTGAGGTGCATGCAATTTGAACCCAAGTAATCCGT
ACCTTTATCTTTGAAGATCCAATTTCCTAAGTCAGAATCACTGAGTATCA
ATGAAATTGGACCagcaatttcattttattttaaacttttctcttgacac
ttaccttgtttacacataaaaataccaaaaaatgcaactgtgttcatcaa
aactcgtcacggaatttaagaatatggtaaaacaaNTTGGGAATTTTTAT
ATTTACCATGCATGATATATCAGTTTCCGCCTGATATAACCAGCAAAACT
ACGACATGTTATACATGTTCTGTTAGACCATTATTCAAGAttctgaaaat
ttaaactttatGAAGAAGAAATGTCTGTCGGCTTACCCTGGAGTGACATT
GTTTATCATATAGATTCGAATATGATCTCATTCAATCAGGGGTAAACTCT
GAAGGGGGACTGACCATAACGGCCGACGGAACCGCGCCGATGGAGTATGA
AAAGTGGACTCtgttaaatatgatttttttatcaaattatgaCGCTGTAG
AACGAAAAATCTTGCCCAATTTCACCCTCAAAGGTGACAAtggtcgaacg
tgcgcaacgtaCGGGGCTCAACTttagtattttttaaatgatttgtAGGC
CCGGTTATAACATTGATATTCCAAGTTGAGTcgaaattttcagccaaatc
tgaaCGACTCTTGACATCTCCAGACTGCCCTGAAGTTGAAGCTCTCTGTT
TAAGTCTTAGTATTAAGTATAAGTTTAAGTCTCTGCGAAATACCTGGGGa
ggaaagttaaaattttaagaaagtgAAAAGAACATCTCTAGATATTCACT
CAAGGATGTAAGTATGCAATTACTTCAGTTTAAAGAAttattttacaaga
tttttcaaGTCTGACTGAAGATTGTTGTTGTCTTCATTTTCTGTTGATGA
TAAAATCTAAAGGAAAATTTCTTTGTCAATGTATTTTANAAGGATGTAAG
TATGCAAGTACTTCAGTTTAAAGAAttattttacaagatttttcaaGTCT
GACTGAAGATTGTTGTTGTCTTCATTTTCTGTTGATGATAAAATCTAAAG
GAAAATTTCTTTGTCAATGTATTTTAACTTTATTAGAATAAAATAGACCT
TTCCATAAAAATTTGCCACAGAAATAACC
Run BLAST on NCBI

transcript from alignment at sc0000452:60348..67084+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023343 ID=TCONS_00023343|Name=TCONS_00023343|organism=Clytia hemisphaerica|type=transcript|length=6737bp|location=Sequence derived from alignment at sc0000452:60348..67084+ (Clytia hemisphaerica)
GAGCAGGCAAATCGTCATGGAGTGCTGATGGTAATCTTGGGTTTTGTCCA
ATGGCGAGCTGTGCTGGGGTAAAACCATGTACAAACATGCACGTGTTACG
GATGGATGTGGCATATTGCAGGGCAAGAGATTCCGAGAGCTTTGGATTGT
CCTCTAGCATTTTCTCCATCATAATGTCCATGGTGCAATGATTTCTCTCG
TTAAGACCGTTAGCCCACGGGCTTTATGCTGCGGTATGTTTGATCGATAT
GCCAAATTGATTTCCAAGTTCTCTCATTTCATCATTTGCAAATTCTCCCC
CGTTATCCATATGAAATGTATTTGCAGCTCCAAAAATTGGTAACCATAgt
tcaataatttttgaaataacaaCATGCTTTTCCTTTGATTTGACGAAATC
TGCTCGAGTGTAACGCGTTACCATATCAATGAGGTACAGTATATCTTTAC
CGTTTCTTTCTTTGAGATCAATGCTGACAACTTcattaaatttcatttta
tcgGGAGTAAACAAATTACCGACAGCTGGTTTTGGAATCGATGGTTTGTA
GCGTTTACACACTTCACAGTTCTTGGTGTAATTTTCAAGGATGTTCAAAA
ATTCCTTGTCAGGATCATTCAAGCCACTCAagacttttttcataaattcg
AAAGTTGGATGGCAAAACTGTCGATGAATTTGTTTGGCTGCATGCGTTTT
TTGCTCTCTGGACATTTCTTTGACGGAAAACATAACATCAACTACTTCAA
CGGGAAATCCAGGTTGAATATTAATACACCAGTGACCAGACGGAGCATTA
AACAGCTCTACATTGTTCTTAACCGAATTTATTGTAATTTCTGCAGTGTC
ATCACCTGTATTTATCAAAACGTTCCACTCTTTCATGTTGTGTTTCCCAA
GAAGTAGTGGAAGATCGGTTTCAACAACATCAAATTCGATGAatgttatt
tgatttgaaatcatGATAGGtgctttgattttctttatcgaTTTAAAAAC
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCACAAAGAA
GATTCAGGCCATGAATTCTATCACCCAGGTTCATGTTGTATCTTTCCATT
CGAACTTTGTACTTTTCATAGTGCATTAtatattgttcaattgtttgTTC
TTCTTTCCGAGAAAGAGTTCGAAATTCCTTCCATGTTTCAAATGCGGAAG
TATTATCATCCTTACAATAGTAAGTCTCAATCAATTCAATGACTCTCTCC
CAGCCATTatctcctttcatttcattagTATCAAAGGTGTCAAAAACCTG
GCGACGAATTTCACTATTGTTCGGTAAGTGTAATGCCAGTTGTAAACCAT
GAACATTTTTAAGTCCTGCAACTCCTGCAGTAGCCTCTTTCCAGGCTTTC
ACTTCACGTAACCATAAAGAAAACTCCTTGTTTTCTTCGTCCCACTGAGG
TGGGTTTAGAAAACCACTACTTGCCATCACAACCAACGTCTGCTACCATG
AAAGAAATGATACGGATCGAGTGATTGATAGTGTAAAACCCACCAAAGTG
TTAATGTACTACTCTATAAAATATAAACGTAACATAATGTAGAAACAACA
GGAATGTTGACATTAACTTCATTTGTAGTCTGGTAATTAGGAGATTTTAG
GAGAGTTCATCAGTCATATTTTGGAGGGATCCTATAAGATAAACCCAAAA
TTAAAAACGTACCTCCTACTTTCTGGTTTCCTTCCAATTGAATTTCCTTC
GTGTTTTCCAAGCTATCACTTTGGAGCGTCAAAAACGCTAAATTTCTGGT
TTTCTTCGCtgctttttgttgttgttattctaagctatgactttggagca
CCAAAAACGCTAAATTTCTATTCGCGTGGTCGATCTAGCTTAAAAGCTCA
CCCGCAAGGCGATCTATTAGATGTCGCCACTTGGTTGCATCGTCCCGCTT
TTTTTTCTTGCACAATTTTGTGAAAGCTCGATCCCCAGCCGCCTCGTGAA
GCAACAAAGCTCCCTTCGGGAGCAATAACTGATTCTTGTAAGTTTTACTT
TTCTCTGGTAAAGAGTACTCTGTACATTTATCCTTCTTTTATGTTACGGA
ATTGGAAATTGGAAATGGTGCTTCAATCTTTCTTTTACTAACATATTTGT
GATTGACAAAGAAAACCacgagaacttttaaaatctttattaaataAACC
TGACGTAACCAAAGGTGTTTAGAAAACAAATAATATCACattcgcatcca
ttcggatcGGTACCATTACAATTATTTGATTGTTGGAGAAcgaaaataaa
tattcaaatcaaaacagaaaTCGAATCTTAAAAATAATATACGAATGTGA
CTCGATTCGTAACACCCTGGGATTTCAATACAAAACTATTCatttgaatg
ttgtaaattgaaattcgttttgattttttttttactatacttgTGATCAT
GGTGCAAAGAAGACACCAAAACGTCAAacaatgaataaaattaaattttt
agttttcactatttttatcaaaactattCAGCTCATCCATAACCACCTTT
GCAGCGTCTGGACGACCAATCACCAAAAGTGCAGTATATAACTGTTCCTT
CGTAGGGTTTTCCCCCGTAACATAATCATCCAAAAACGATCTTTCGAGGA
TTCAAGCGTATATAACCAAGCTTATCCGCGAGGTGCATGTAATTTGAACC
CAAGTAATCCGTACCTTTATCTTTGAAGATCCAATTTCCAAAGTCAGAAT
CACTGAATATCAATGAAATTGGAGCagcaatttcattttattttatttta
ttttatttaagggctctgaccattgggaatttttttttaccatgCATAAT
ATATCAGTTTCTGCCTGATATAACCAGCAAAACTACGACATGTTATACAT
GTTCTGTTAGACCATTATTCAAGAttctgaaaatttaaactttatgtAGA
AGAAATATCTGTCGGCTTACCCTGGAGTGACATTGTTTATCATATAGATT
CGAATATGATCTCATTCAATCAGGGGTAAACTCTGAAGGGGGACTGACCA
TAACGGCCGACGGAACCGCGCCGATAGAGTATGAAAAGTGGACTCtgtta
aatatgattttttgataaaattatgaCCCTGTAGAACGAAAAATCTTTCC
CAATTTGTAGTAATGTAAACTTGACATGTTTTATGTGTAACTCTTTCTAA
AATCCATGAATCTAAACTTGGTCCTCGTTTGATGCCATGTTGAATCTTTT
TCGCACGCTTTACTgaactttttttgaagttgcTGTAACTTTGTTtgtct
ttgaaatttctctTGTGAACCTTTCTTTCTGCCAAAGATCTGGTAACCCT
ATATCATGCATCAACTTGACTCACCACGTGAGACATGTAAGACAATATTA
TATCATAAAACTCTTCAGTGTCCAAATACTCAAGTTTTAGTATTATATCA
CTATCATAAGAAAGCGTAGAACTTCTTTATTccacagttttttttctttg
tgttttttcaACATCTTCCGTCAAGACGCTTGTGTCGTATTTTCTTAGTT
GCAAAGGTACTAGAACACCCCAAATGTTCAAAGAAATGATTTATGATTTC
AAAGGGTGTAAAGGTTGGAggtatttttcaggttttgacCCACTACATTT
GGGTTAAAACATAGTACTTATGTTGCCTTagcttctttcttctttcttaa
tttttttcacaaaggGAGGGGCGAGAAGCACTTCACATTTTTTTGGGAAC
CTGTGAAAACGTTGTCAATTTAACAAACAATGGATGAGCTTCAaagtaaa
tttcaattttcaaccgTGATTGTTTTTCATTATTGCGCCTCTTTTGATCG
GTGTTTGTTCCGTCTACAGCTTCCTTCATTACATCTTTtggtttattttc
aatattgaaATATGATTCACTTGTATTTTCATTTCCTATTNTAAAGGGTG
TAAAGTTTGGAGGTTTTGACCCACTACATTTGGGTTAAAACATAGTATTT
ATGTTGCCTTagcttctttcttctttcttaatttttttcacaaaggGAGG
GGTGAGAAGCACTTCACattttttggggggacctgTGTAAACGTTGTCAA
TTTAACAAACAATGGATTAGCTTCAaagtaaatttcaattttcaactgtG
ATTGTTTTTCATTATTGCGCCTCTTTTGATCGGTGTTTGTTCCGTCTACA
GCTTCCTTCATTACATCTTTtggtttattttcaatattgaaATATGATTC
acttgtattttcattttctattaCTCCTTACCATCTGAGGGTTTTGTTTC
GGTAGATCTTTGGCTGCATTCTTGTATGTCTTTTAACATTACATTCGGCT
AAAGTAATAAAATCCAATAGTAATAGCGACCGTCTTTCAGCGAAATTGTG
GGGTTTGAGCGTCGTTTTGAATCATGCGATCCATAAATCTCACTGCTACT
TTCTTATTACGTTGATACCGTTCTTGGCATATTGAACATCGAAATTCTGC
ATCTTTTTCATCCAATGGTCGTCATCTTTCTTTTACTAACATATTTGTGA
TTGACAAAGAAAACCacgagaacttttaaaatcttcattaaaTAAACTTG
ACGTAACCAAAGGTGTTTAGAAAACAAATAATATCACATTCGCATCCATT
TTATGATCGGTACCATTACAATTATTTGATTGTTGGAGAAcgaaaataaa
tattcaaattaAAACAGAAATCGAATCTTAAAAATAATATACAAATGTGA
CTCGATTCGTAACACCCTGGGATTTCAATACAAAACTATTCAGCTCACCC
ATAACCACCTTTGCAGCGTCTGGACTACGAATTACCAGAAGTGCAGTATA
CAACTGTTCCTTCGTAGGGTTTCCTTCCGTAACATAGTCATCCAAAAACG
CCTCTACAGGATCTTTCGAGGATTCAAGTTTCTTTATGAAAGCGTATATA
ACCAAGCTTATCCGTGAGGTGCATGCAATTTGAACCCAAGTAATCCGTAC
CTTTATCTTTGAAGATCCAATTTCCTAAGTCAGAATCACTGAGTATCAAT
GAAATTGGACCagcaatttcattttattttaaacttttctcttgacactt
accttgtttacacataaaaataccaaaaaatgcaactgtgttcatcaaaa
ctcgtcacggaatttaagaatatggtaaaacaaNTTGGGAATTTTTATAT
TTACCATGCATGATATATCAGTTTCCGCCTGATATAACCAGCAAAACTAC
GACATGTTATACATGTTCTGTTAGACCATTATTCAAGAttctgaaaattt
aaactttatGAAGAAGAAATGTCTGTCGGCTTACCCTGGAGTGACATTGT
TTATCATATAGATTCGAATATGATCTCATTCAATCAGGGGTAAACTCTGA
AGGGGGACTGACCATAACGGCCGACGGAACCGCGCCGATGGAGTATGAAA
AGTGGACTCtgttaaatatgatttttttatcaaattatgaCGCTGTAGAA
CGAAAAATCTTGCCCAATTTCACCCTCAAAGGTGACAAtggtcgaacgtg
cgcaacgtaCGGGGCTCAACTttagtattttttaaatgatttgtAGGCCC
GGTTATAACATTGATATTCCAAGTTGAGTcgaaattttcagccaaatctg
aaCGACTCTTGACATCTCCAGACTGCCCTGAAGTTGAAGCTCTCTGTTTA
AGTCTTAGTATTAAGTATAAGTTTAAGTCTCTGCGAAATACCTGGGGagg
aaagttaaaattttaagaaagtgAAAAGAACATCTCTAGATATTCACTCA
AGGATGTAAGTATGCAATTACTTCAGTTTAAAGAAttattttacaagatt
tttcaaGTCTGACTGAAGATTGTTGTTGTCTTCATTTTCTGTTGATGATA
AAATCTAAAGGAAAATTTCTTTGTCAATGTATTTTANAAGGATGTAAGTA
TGCAAGTACTTCAGTTTAAAGAAttattttacaagatttttcaaGTCTGA
CTGAAGATTGTTGTTGTCTTCATTTTCTGTTGATGATAAAATCTAAAGGA
AAATTTCTTTGTCAATGTATTTTAACTTTATTAGAATAAAATAGACCATA
GGTCATGGAATTTACATcgtttcttttaatttactttcgTGGACACAAAA
AAATNACTTTCCATAAAAATTTGCCACAGAAATAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013128XLOC_013128Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023343-exon-sc0000452-1491911889:60348..61158TCONS_00023343-exon-sc0000452-1491911889:60348..61158Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1510915933:60348..61158TCONS_00023343-exon-sc0000452-1510915933:60348..61158Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1575043694:60348..61158TCONS_00023343-exon-sc0000452-1575043694:60348..61158Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1491911889:62515..64510TCONS_00023343-exon-sc0000452-1491911889:62515..64510Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1510915933:62515..64510TCONS_00023343-exon-sc0000452-1510915933:62515..64510Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1575043694:62515..64510TCONS_00023343-exon-sc0000452-1575043694:62515..64510Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1491911889:64853..66994TCONS_00023343-exon-sc0000452-1491911889:64853..66994Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1510915933:64853..66994TCONS_00023343-exon-sc0000452-1510915933:64853..66994Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1575043694:64853..66994TCONS_00023343-exon-sc0000452-1575043694:64853..66994Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1491911889:67055..67084TCONS_00023343-exon-sc0000452-1491911889:67055..67084Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1510915933:67055..67084TCONS_00023343-exon-sc0000452-1510915933:67055..67084Clytia hemisphaericaexon
TCONS_00023343-exon-sc0000452-1575043694:67055..67084TCONS_00023343-exon-sc0000452-1575043694:67055..67084Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000452supercontigsc0000452:60348..67084 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0610948	0.111702	0.181055	0.0409889	2.26296e-08	0	0.00621957	1.4848e-09	0.196515	0	0	0	0.288842	0.0492335	0.331107	0.21646	0.484814	0.431375	0.565301	0.823136	0.874103	0.615491	0.297187	0.518057	0.0624578	0	1.01604	0.18577	0.215101	0.268074
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023343 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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