XLOC_013213 (gene) - C. hemisphaerica

Overview
NameXLOC_013213
Unique NameXLOC_013213
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000455:340140..348705+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013213 ID=XLOC_013213|Name=XLOC_013213|organism=Clytia hemisphaerica|type=gene|length=8566bp|location=Sequence derived from alignment at sc0000455:340140..348705+ (Clytia hemisphaerica)
CGTTGTtttcaattatatttttaaaatctaaCCTTTTATCCTTGGATTGA GCGAGATAAATAGCACTGCCTTACGATGAAACCCTCGTCTAAAAAAGATT TGACGTTCGAATCGAGGAAGCTCCTACAGTGACTTTGAAGCAAAAATAAT TCTGGTGTCAATTATTCACAATATCAAGTGATGTCGttgcctgtaccaga cgaccacggaTTTTTCCTCGACACTGTTcagagtgataaaaaaatcgcgt gttgggatagagataggctaGTGACGCCGTTGcaaattttcgaatttaaa aAGGCATGGCATTTTCTACGAGTTACTAAAAATGTGTTTTGAAAGTCTAT GCACAAGTAAAATCGGTGTTCTTTTAGGCGAGAAAATGATAGAAGTTGTT GTCCATAAGCTGCGATATACCTATGATCGTTTTAAAACTAAAGTATTTAT TTAAAACTCATATCATAATCGATAAGTTAACTTTGCgtaatattgttttt tttacagACATGTATTCTTGGGTCGGGGATGACATTGCAATAGAAAAACC CGATGGAAAAACGTACATAATTTGTCTTGgaataaaacaagaaaaaggtg ctagaaaatcattttgaatATCATAGATTTctctgtaattatcagacata TCACCCTTGTTCCACGATTTTATTGGTCCTATTTTTACACGCTTATCATg actctttaattcgaacctctcttattcgaatctttctttaatacATGGAA GgtattttacattttcaaaagagCACTCATNTCCTATTGTTACACGCTTA TCATGACTCTTTAATTCGAGCCTctcttattcgaatctttctttaatacA TGGAAGGTATTTTACATTTTCACAAGAGCACTCATACACTTGTGTTTTTG ATACCGTCGTTGAGAAgaattttccttgtatttccGTTACCAGTCTGAAA TGCTAACCGGGCCACTGAGATTCGGCATGTGTATACAAACTAACAAATTA GTCCCCTCATTTTGGAAAGTGGCATAAAATGAAGAGGGTCAAttgtataa aaaaaatttcgattgagATTTTGCACAACTTACTGTATTCTGGTTTCAGA CAAACTGACAGCCAATGAAAATGGAGATATTCAAGTCAATTTGGAAGACG GTTCAGAAGAAGAAGGCATCTATGTTATCGCTTTGCCGTCAAACGAATCC ACAGGTATGTAAtataagaccatgttcagacgtcacggttccgttccgtt ccgttccgaaacggtttcgaaacaagtgtgaacgtcaagaTTCGAAACGT cgaaaaagaagacgttacaaagcaaaacagatcgaaacggtttcgctcca cttttttcatcggaactgAACttctccgttttcttgctccgaaacgttcc aaaaccaatatgaacagactcgatccgtaacgaaaatcataccggagcga aacggaacagtaacgtgtgaacatagTCTAATCATATTTCAATGGGCAAA ATTACCCTCAGGGAGGGACGTCCAGGCAAAATGACCGACGGGTATATGTA CACCCTAAAGTGTGTGTTTTAAATACTGAAATACTGTTCTTCTTTGGCTT TTTTTATCTTTACTAGAAGGTACTCGACAGaattttcagtattttcttCT TGCAAAAATCCTATGTAATAAACCACCAATGGAAGCTTCGAGTAATGACA TTATAAATCCACGCCCAGTCTCCAACcaaaaagttcttatttttCAGGTT TCCAAGTGCATGATGGAGAAGGAAATTATGATATCATTGAAGAATCAACG CAAggtaaagtcaaaaagaaacaatctttacaccttttcgaccgtagctg ccaattgccgcgcgggcatttctTTATCCGTTTTATCCAACTAAACTCGA TNgccttttcgaccgtagccgccagtTGCCGCGCGGGTATTTCTTTATCC gttttatcccactaaacttGATCCaaaccttttttgacacatttttctat tgtttattcatgatatgcaccattgcaatgtctcccacgaacccaacagc tgattggttgcaagtgacgtattgactgattttatgttacttacaaccaa tcagctattgggtccgtgatataatgtcagaagacattgcaatggtgcat atcatgaatagatgcGGATTGTTTTAGTGTgataaagtggacaaaaaaat aCCCGCGTGTCAATATTGGCGACTACGgtagaaaaggtgtattatcaATC ATGTTCTAAATGCCTAAAGGCTTTATTTTGGGTTcaatagactttttcat aaattacgtcatgagcatcacttgcctcgtattcaaacaattaccatggc ttgaattatgtcccttgagacgttaaataaatttgtttatgaatagaaag tagtttcaataaaatccacagggagttaatcaccttggtaataatttcaa aacgaggcaagtgatgttcgtgacgtaattggAGTTTAAGGAAAGGTCTA TAACATTGGGAAAAGTGCTACAGAAGAGTCTGTATAACTCTAAAACGGAA GGCaattttgttcgagttaaagccATTTTCGAGCCCTGGGGActagttta taaggcattgttaaagTGAAGAAACCATCTAACTTGTTtgaattaaggag acattcgagttatagagggtCGTGTTATAAACACTCCACTGTATAAAAGT TTATGTGCAAGCGAAACCAATCCTTATATTATCATggtgtcctgaaaaaa agtagAAGGTCGAAACATATCGCTAGGTACTGTCGCTTTGTACTACTGTT TATTAACCCGAAAAAGCATCGTATTATGCAgaggtagagcatccggctac agtGTGTGTAAGTCAGGGGTTTAATCCCCGACTGGGTACACTGGGTATCA CAAAAATCTTCGCTCTTAGTGAAAAATGGGTCAGGGGGGAGTAAAGAAAG GGCGGGGTCGGCATTGAAACATGCTTTGCAAAGCAATCTGTTTTGATTTC CTCATCTTTCCGGACTCTCTTCCATTTTTTTGTGTCAAAATAATTGGatt tttaatttcgccttagcgaatTATTACGATAGCCTTCTGTGTGCGTTCCT GTGTCCttggaaaaaaatttagaataaacGAAAGTTTTCCATACCGTGGA CGAACTTACTAAATTTAACTTACACTTTACACGTTCGTTTagccacggac gattttcgagCGTTTTTATAGTGGTCCAATAactgtggagataataaatT ATATCAAGCCTTTTTGACGACTGTATTATTAGCTCCACAGTTTGGAGCGT ACGGCTCCCtaattatttttgtaaacattcattagtgaggttaagtatac cgcgataatcacgacgacggacgaaaaatgtaataggctagtggaaatac gaaatctgattggttgaaactcactagcctgttaaattttcgttcgtcgt cgtgattttaccgatttacttaacctcgctattgtgAGAACTTTCTAATG GctcttttgaaacttgctgctgctgtcaGGCTGTgtgctgtataaatttt tatcatgttttctggccttttgtagagtatttaaagaggtttattattcg tttactactaagtatttcatgtttgtgtagttactgaatgcaccaataaa ttgataatgctcagtaagtagAATAAAAAGAGTTACTTTTTCacaaccaa caacaacaacataaaTTCCTCCTGCCTCTTCTTCACTAAAACTTCGAACA GCAGgaatgatctttttttccttttttcaccaaatagtaatgtgttaata gtgaaaccagttgaGACAAATAatcagttttagcaagtattCTTTAGAAG TTCAGAAATTCAGCGATCATTTTCTACTACACTGGGACTACACtactgtg agatcgggtaacttgcatcagtgcacAGTGGAGGCTAATGCATAGCCCCT CAAATGAAGttaaatggtagagtagagcttcgAGTAGAGCTGTgcagttc ttttgttttgaaattttgatggctatatgtaagtttccctccactgatgc aagttatacccgacttcacagtatCCATCGAAAtcaaacgatagctgttc gattacccaAACGATAGCTGCTCGATTACCGAACCTTATTtgcttagaat tttttttgattagtttgattatataagtttgatgacagtttttttatccg atgaagtttgatcggtGTTCGATGGGTTTGGTAAGTAagtttttccagct tttcctccccaatgggatgatagatattggcctGCTCTTTATGGCttagc gtgggcgtctgctaataagccgttgGAATGTAAAAAAGAATgagcaacaa ggtaataaatcaaactaatcgagcttcaattaaacttcaccgatcttaat acaccttttgctaatctggattttcattttgatatataaaattctccagt ggtaccgttgttttgtataagattcccgtTTCCGTACTAAAGGTCTATTA CAGCATCAGAAGAATAATTGTATTACTTTATAagtgagtctgctaaatcg cgtgccacgcgtgccagcgtgccatcggtttttaggcgtgccagcgtgcc atgcgtgccatgcgtgccttcgtgccaaCTGTCTTGGCGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNccaaattttggcgtgccatccttattccggcgtgccat ccaagttttggcgttccaaccaaattccggcgtgccaaccaaattcCGGC GTACCATCCAAGTTTAGGCGTGACAACCAAATTTTgcgtactttttcaaa ttttcagagtctttATTTTCCATGAAACATTAATTGTTAGGCGATATTAT GAAATATACACTTACTACGGTCTCTTACACGGGTTAAGGTACGGCATGTG AGCCgagtaagaaaaagaaaaagtcaagaaaaatgatGACTTCTGAAAAT TACTTTAGCCCTTGGACAACTATTTAACTAAGCTCCTTATTTTTGGCTAC AGCTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNcaaaaaaaaaaattccagaaaaaaactttttcaaaaggttt cagaatgaaaagctttttcaatttttttagaacagtagcgtagacagggg tgaagaAAGATCTGCGTATGAGAGTAGATTTTAACGTCAAAGCTATCTAT TCGTGACAAAGAAACATCATTACTATGTCGTTTAATCTATTCTCGGATAC CTAAAAGCCGGGGCgctataattaatttttcgaaaattttccatccagga TATTTTTATTACACCCCCCCCCTCGTATATTAAGTTTTGACATCTTTTCC AACCCCCGGTAGGTACCTGAAAGCAAGCCAATGTTGCTTCATCCTTGTTT ACTCTATTGTacaagactccaaactgctcaaaacgACTGAAAATGACATA ACATCTGGAGGTAGTTTAACGTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtg gcacgttggcacgccatggcacgttggcacgctggcacgttggcacgcca aggcacgttggcacgcaggcacgcatggcacgttggcacgctggcacgca taGCACGCTGGCGCgcgtggcacgcgatttagcagactctttaTAAGTGA GGTTTAAGTCAATTTGTATCTGGTGGGAAAATTTGAGTGATAGTGGTAAA TAAATCTTGACTGAAGTCTGTATCCTTAAtaagttacaagcttttcttaa tatattttcatatggATTATTGCatattgagattttggaaatttttggca aaattagcCAAATTTTAATCTCAAGGCGTATTATTTCTTTATTAAAGCTT ATtaagttggctagtttttaccctgccattttctagttcagaagctggag ctcaacaaCTCAACTGTTTTTTGCCTatgattttgatggtggtgcgccat cattcatatcaaaaagtgaagatagtatacaacagatttttNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNTTTTCTCAAGTTTATTacagttctctgaattattcttct gaattgaaagatttttttacgcttatatataaaaaggaattttttagtcg catttttttaagaatctttttgttcttaatggattgagatttttcataag aaaacagGGTATCTACGACCTGTATGTACAATACAATGTGTATTTTTttc acgtttcacgcgtcttcgttgtttatgttcaaatattatgcgaaattttt tgactctaagtcgtcttgttttacGTTATGATATGATTTCAATTATTTGC AATTTTAGGTTTTCAATCAAATGAAGAAGAggaagaggaagaagaagaag aatacGAAAATGTTTGCATTGAAATTGGTCCTTCAGAGCAAGGTGAACCT AATTCAGACACAGTATACGAAAACTAATAAAACAATCTCGTAAGAATATC GACCAGTCTCGTACCGAGAGCCACNACGAAAACTAATAAAACAATCTCGT AAGAATATCGACCAGTCTCGTACCGAGAGCCACTTACACcgctttttaat ttaatttatgaATGTGATATCACCATTTGCTCTCAGAATCGTAAAAAGCG AACAAAGAGACTGGAt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023512TCONS_00023512Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023512-proteinTCONS_00023512-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000455supercontigsc0000455:340140..348705 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.04 2.43 2.69 1.27 0.8 0.21 0.41 1.15 0.4 1.02 1.11 0.79 1.72 1.45 1 1.52 0.97 1.76 1.39 1.35 0.91 1.12 0.99 1.34 1.41 0.78 0.58 0 0.46 0.22