XLOC_013281 (gene) - C. hemisphaerica

Overview
NameXLOC_013281
Unique NameXLOC_013281
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000457:245089..255449-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013281 ID=XLOC_013281|Name=XLOC_013281|organism=Clytia hemisphaerica|type=gene|length=10361bp|location=Sequence derived from alignment at sc0000457:245089..255449- (Clytia hemisphaerica)
AAAGATATATAGGGTAATGAGTTGATTGAGATCAAAAATAGAAAATATTG
GGCTGACATTTTTTTGATTTCTTTATAGTCTGAGTAAGAGATTCGTTTTT
TTTCTTCATGAAGACAGACATATGGTGAGATTCGCTGTTTTGACCTTTTT
GGCAAAATAAGTTGATACGAATTTATACGAAGCAACAAAAATGGTGTTTT
ATATATTCTTTCTTATTGGTGGTCTAATCCCATCTGTTTTTGCTGGTAAA
CCATCAATTGTCCGGAAAAAGGAAATCACTAGTGGTAAAGCTCCGGACGG
CGAGCCTATGTTTTTGTCATATATTAATTTCGCAAAATTCCAAAACAAAA
TGCTGGTTGTTGGAGTACCTTCAGCGTCGATCATCAATGCAACTTTTGAC
GAGTGCAATGAGAAATGTTTGGAGATGAATGATTGCGTTAGTATGAATGT
TTATAAGGAGAATGGAACCAAGTGTGACTTAATGAGTACAGATCAGCACC
ACGCCAATATGACAGTACTTGATGTACAAGGTGTAGATTATTATGAGCCA
ACGGTTAGTAGAAATTTTTTATGCACATAACTTTTTGTTATAATAAGATG
AAAATACTTTCTTCAGTCGATAAAAATGAGCAGGTTAAAAAAAAATCAAC
AAATTGGCCGAAAGTTTAACTTTAAAAAAGTCCTTTAAATTGTATACCTT
TTTACGACGACCCAGAAATCAAAAATACAATGATAAAAGAGACGTATTTC
TGTGTCAAAAGCTAGGGGGGGCAAGCTATAGTTATTCGGTCATATCATCA
ACGATTTTTTCTTTACGTGAACTCTTTTTCAACTTTTTCAGGAAGCACTC
TATTCCCTGTTGTTAATTATTTTTCTTAGAGCGATTGCGTGAGAGGGAAC
ACTAACTGTACCAACAACTCTTTTTGTATGCCTGACCACCATACTGGCGA
TGTGAAATGTCAATGTAAACGATCCAAAACACAAAATTGGAACTGCTTGG
AAAACGACACAAAATCCTCGACACAAAATCCTCTGGGTTATGGTTGGTTT
TTGGTAGCAAAATTGCATCAAATTTTTTCAGGTCATCAAAATCACAATCT
GATTCATCAGGCATGCCCGATGGACGAAAATACGTTCATCAGGCATGCCC
GATGAACTAAAATACGTTCATCAGGCATGTCTGATGAACTAAAATACGTT
CATTAGGCATGTCTGATGAACCAAAATACGTTCATCAGGCATGCCCGATG
AGCTAAAATTTTGTTATTAATAGAAAGTGAAAAACATCTTTTGAAAATCA
AAACTACGTTCTTCAAAGATGTTAAAAAATTCTCGTTTTCGTTCTGGACT
GTGGAATTAGAGGTTTGTTCCGTAAAATCTGGGCGGTGGTCCTCAATTTC
GTATTGATGTAAGACCATTTTCAGCATTGTGGGTAATTAGAGGTCTGGGA
CTAGCGAGATTCCTTGGCGGGAAAAAAATTGAAGCGAGCGCTAAATCTTT
GTTTTGATTTTCTTTGTGAAAAACAAAGACTTTTGATATTAAGTTTCATG
TTTTTGGTCATTTTAATGATTCTATTATTCAAATTTACAATACAATTTTG
TTTTAAAATAATAAAGTTTTGAGTAATATTTTGGTCTCTATTTTTCAAAA
TTTCTTCATTTTATTTGGTCTTAGTTTTACACGCTTTATAGTTCAAACGC
GTTTAATTTAGAAAGATCAACGCGTTTCACACGCGCTTTAATAAACAAAA
GAAATATCTTAATTTGGTGATTCAGCGTTCGTCTGACGTAATTTTTGAAT
TCTAGCTCAGCCAAAATGGTCGTAATACCATACTTTCAATGGAGTGCAAA
TTTCAGAAACTGCTGATGCACCAATCTAAAGATATTTCCACTTTAATATT
TTTCTCCCTTAATTTAGGGACAGTGTCCTTTAATTTAGGGATTGTCCCTT
AATATAAGGACCCCTTAATTTAGTATAATCCTAGACTGGTAAACAACGGC
ATAATTCTGTTTCCTATCTGTTGCGCATATAAAATTCAGATTTATTTGCG
TTGGCAAAAGATTCTGGCNCGTCCCTTAATATATAAGGACCCTTTAATTT
AGTATAATCCTAGACTGGTGAACAACGGCATAATTCTGTTTCCTATCTGT
CACGCATATAAAATTCAGATTTATTTGCGTCGGCAAAAGATTCTGGCTTC
TATAGTACAGTATTCATGATATTCATGACGTAATCTTTTTATACGGAAGC
ACCCAGAAATAACCGGAAACCGGAACTAGTTCTTTTGTTATTTTGCCACT
AGTTCTGGTTATTTCGGATGCTTCCATATAAAAGATTACGTCATGAATAT
CATGAATAGTACAGTACTTTTGCGTCGTAAAAAGCCAAATTTACATTGGC
TTCAACCGATCACTTCGATCAGCTTCGATCGATTCAACCTACCACTTAAC
TTAATTCGACATTGATTAGCCTCCGTCTCGGAAGGGGACTGGGCCCGAAT
TTGCGGACGTTTTCACAGTTTCACTTTCGTTTTCGGCTATACGACAGCGT
TTTCAAGCAGAAAGCANGGGGGGTTGGACCTGCTGTCCAGGGGGTCAAAA
GTCACAATGTCCGAGGGGTAAATCTCCTCCACCCCCATATTCAATTTTTT
TCTGGAAAAGCCCATCTGCACGTATGCTCGTTTTTACCCCCGTGTAAAAA
GTCATAATGTAAGTCACACAATCACAATAATTATAAAAAATCACCAAAGA
AACTACAAAAGTATAAAAAGCCACTTGTCCTACCTGGTATTTGTGTTCAT
CAGCATTGATATTGTAAGCGAGTTTGAACAGGCCCTCGATCACCACAATG
TTGCCGGTAGTGATGTCAAAAGAAAACACTTTCAATTTTAGATGGAGTAT
CCATTCAAGTTTCAATTGTGGTATTTCCAATAATGTCCATTGACTAGAGG
TTTGATATTCTGTAAAAAAAAACATTANCACTTAGAGAAAATGGTACTAT
ACATACTATGGAAGCCCATTCTATACTCCTAAATGATATCAGCAGTTGAG
AGGGTTGATTAAAATACAACTCAAAGCACACAATAAAATATACATATATA
TTTGTCCAGAAAGAACTGGCATGTTGTTTGCTTTGTTTTGGTGTTTAAAA
ATATGTACTTATCAGTCCTAAAAAAATANTCGATACACATTTTCTTTATA
AATGACTTCAATTTACGAATCAGGGCTTGGTTTACTTAGCGTTTTAGCTC
ATTTTCTGAAAAATTTGTATTCAAATGAAAGTCAACAAGACGACTGAAAA
GTCGAAAATTTCGCCTTGAAAATATGTATCGATAAATACACCCCTGAGTC
AGTGGCCCGGTCAGATCCACCCCGGTGAGTAGCCCGGTGAAAAAAATGCC
TAAAAACAGCCCAAATTTTGTCCCCGGTGGAAAATTGGTAACCCCGGGCA
AAAAGGCAAAAGGTTTTGGAAACCCGGGCTGAGGCATGAAAGTTTCTGTT
TACCCCGCTGGAAATACTGAAAATTTTGATTCCCCCGGTTGAAATCAAGG
AAAGCTTGGGTTACCCCGCTGTTGAAATTAAAAAGTAGNNNNNNNNNNNN
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NNNTTCCTTATAAACGTGTTCCTTATATAAAAAAAACGTGTAATGTTTTA
AATTCATTTTTGATGGATTATATCCCTAGCTATGATTTAAAACAATGTGA
CACTGCTAAGAATTCATTTGCTTGATACCCTGGTCAGTGCCCCCGACCTA
ATAGTTAATACCCTGGGAAATGTTAAATGTTTCCATCAACAATGTATATT
TCTTCAAAAAATCAAAAACAACACGTTGTTTTATTCTCCCCCTTTGTGAG
GCCTGGATGGTTTCATGTTTTTAAAAGAAAAAGTGTGGACATTATTATTT
TAGTTAGTAAGTCAATGGATTTTAAAAGAAATTGTGGGATCTTTTGTTCT
TCTATCGTAACTTTTTAGCTACACACTTTTTATACGCAACACAGTGAAGG
GCTCAGGCTTCAAAATGGCCAAAAAAGCAAGTTGGCTTAGGCCCTTAGGA
ACCCTAAACCTAATAAGGATGAAAAATTTTTTAAATAAGGGAAACCTTTT
TTTTTTCTTTTTCCACTCTGAAAAGACTGAATTCTTGCTATATTACGACC
AAAAAACTGCTGTTTTACTATCAACAATTTGAAATTTGAGGCCATTTTTA
GCCCATCTAGAGGGTCCTTTTTTCAAAAATTTTCTTAACCGTCGGCGCCA
ACCGGTGGCGCCTCCTCACACACTGATGTAGCCGTTACATCATAATAGTA
AACATACACCACCCTTGTTAAACATCCTAAATCTACCCCTGAATCGAAGA
AGGTGCTGGCGGAGATTTTAGGAGATTTTAGACTATCGACTCTTAAATTT
TTACACTAATAAGAAGAATGATGATAACGGTTATCAAAGGACTGTTAAAG
TGCAATTTCCTCCTGAAAATAGAAAAAATCGCTTATAATTTGTATTTACC
CCGGAGAAAAGTAAGTCAAAATTTTTGAACCCGGTGGATTTTTTGCTCAT
GAAAAAAAACCCGGTGAAAATTTATTTTTTTGAAAGTCACCCCGGTGAAC
TTTCAGAGTCCACTGGGTCACTGAGACAGGGGTGTATAAATATGAGGTAC
AGGCGCTAATAAAAGTGCTTTCAAACACACCTGTGTGATTATTTTGAAAC
AAATCCAATCCCTGCATGCATTTCACTCTTAAAAACTGATCAATGAAGTA
AGCCCGAAGGGCTAGAATTGGATCTCCTTAGTGCAGTGGGATTTGAAGCC
TTCCCATCCCACCAAAAATGTGCGGCCTTGAGCGACCCGCCTGTTTTTTC
TACAAATAACAGATAAAATTTCCCACTAGCTTTCAAAAAATATACCATTT
AAAAAACAAAGAAATCACTAAATCCTATACGTCTCGTCAAAATACGGCGA
AAAAAATAAAGAATTCAATTTTTCTTGCCTGAGAAAGGTTAAAGATTCAG
CTTATACTTCATTTTGGGACTGATTGANGTGGAGGCATCATGTATAGAGT
GAATGTGTGGCATTTCATTGCTTTTAATGATCACAATACCAAACATCAAC
CAAACAAAACTGACGCCAAGCTAAATCTGTCGATCAAAAATTTCCATGAA
AATTATAATTGAAACTTGTCTCGTAAAATGCTTTTTTCAACATTCTGGAG
GTGTTCAAAGGTAGAGGTATCATATGTAGAGCCAAGCAATACATGAAAAG
TCATTTGCTATCCCATTTGCCATGAGATATATGAGTCAACAAATCAAACA
AAAACCAACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTGTAACATGTATTATGTGTACAATTATGTCAGTCGACTTGAATCATGA
TACATTACCCCCAATTTCACTGGATGCATTTTCGCTGTGAAATTATCCGC
AAGATTTTCTGACCGCGTTCTGAGACGGAGGCTAATTGACTACAAACGAT
TCGACAATCAAAATTTACGATTGACATCCCCTGGTCTTGCTCTTGGGAAT
AATGTAGATGCTATTTTTAAAAGAGAATTCTTCAAACCAGTCAATTGAAA
TCAATTGAACTGATCAATCAAAGCAATCAAATTTGATCGAACTCAATCAA
AAAAGCATAGGCAAGCATGTTTCGCCAGATTTGTTTGCAACTAAGCTAAT
AATATACATATTTTTAAATTATACTGTTAGCATAGAAAAAGCTTAGGTTT
AAATATTAGTAATGGCTCTCATTTCCACAAAAGGAACTCTGATAAGGCTT
TTATTTTGTTGGAGCTGAGACTATGGAAAATGATGTGATGTGATGATAAA
AAATACAAACAGACAAACCTGACAAAACAATGCATGCAAATCTTATAAAT
ATTTTCTTCTTTATTGCCTGCTGGCTTTAATGTCCTTTGAAGCAAGAATC
TGTACTGGTGCACAGCAGACCTTTCGACCAGTTCAAAGCTTCTTCTACCA
GTATACGCTTTTCATTAATTTTGTTACTACTAAATATAGCTACGTATTGA
AATCACGATTGAGCTAACATCAGCTAACATACTTAGATTTAGCTACGTCG
CTTTATTTAGCTACGTAACTATAATAATGAAAGGTTTCGTACTGTCTACT
TTCCACTCCAGCAATCACCTCGTGCGCACGTAAAAATTCCAGACCGGAAT
ATTTAATTTACAGAACAGATTTCAGAATTTTGAAATTTTACAGACCAGAT
TGCTGTTTGTCTAAAGAAATACCTGATGAATGAATTTATTTCATCGGGCA
TACCTGATGAACGTATTTTAGTTCTTCAGGCGGGCCCGATGAATGTATTT
TAGTTATCAGGCGTGCCTGATGAACGTATTTTCGTCCATCGGGCATGCCT
GACGAATCAGATTGTGATTTTGATGACCTGAAAAAATTTGATGCAATTTT
GCTACCAAAAACCAACCATACTGGGTCTGTAATATTTCTGAATAGTTCCC
TAACATAGCGAAATAAGACCATTTCAGTATTGGGAAAGTTCACCGAACTG
CACTACAAGTGGTTTTTCGGCAATAAACCTGTAAGATTGCTTAGAGGTCC
TTGAGACTTTCATTCTTGTGATTAAAGAACTCACAAGGGCTGAAATGAAA
CTCAGCAATATTGGGCGGTAACTAGTAAGTGCACTTGTAAAATCCGAAAA
GTAATTCTCAGCTCACCAAATTTGGTAAAATCTTTAGCTTTCGTTTTGAA
AATACTAAATAGAAAATATCTTTGAACTTTCAGTTTAGAATGTTGTTGTC
GAGTTGACCTACTTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGT
GAGGACGAAAAATCGCAAAATTCACGACATTTACTTTCGCGAATTTAATG
GAAAAATATTTTTCGCGAGCATAAACTTTCGCGAATCAAGACGTAAAATT
GAGAAATTTCACATGAAAAATGGCTTCCAGGGACAAATACTTCTTGAATT
GGCTCGAAGATTTGTCCTTTGACTTAATAGTCTTTTAGCAGGCTAAAAAA
TGCCATAAAAGTTACATTTTATTCAAAGTTTTACAGATTTTATATCTTAT
CAAGGATTTTTCGCGAGCATAAACTTTCGCGAATGGCCCTTCCTAGCATT
TTTAAAGACATTTACTTTCGCAAAAAGGGCCAAAAATCACGCCAAGAACT
AAACCAATACGATAGGCCTAAACCTACATTTGACTCTCCTCTGTTGGGCT
TAAACCTCTTTTTTCCTTGCGTGATTTTTACACAAATGCTGAATGCGAAG
TAAGTCCTGTAGTGAAGTCAACTTTATACTAAATCTGATTCTGTCTTTTT
CAAGGGAGACACTGTAATGGTTCGTATGACGTCTTTTTGTATTCATCGTT
TTAGTACCAGATCCCAACGAAAACCAACAATACTGGTTTCCGTATGTTGG
GCCAACTTGGAAAGTTTCCTTCTACTTTGACGCCTCATCGATCGAGCTCG
ACATGTTACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023656TCONS_00023656Clytia hemisphaericatranscript
TCONS_00023655TCONS_00023655Clytia hemisphaericatranscript
TCONS_00023654TCONS_00023654Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023655-proteinTCONS_00023655-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000457supercontigsc0000457:245089..255449 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.13	0	0.08	0	0	0.36	0.08	0	0	0	0.05	0	0.05	0	0	0.16	0.32	0	0	0.33	0.49	1.27	4.39	4.17	8.2	0	0	0	0