XLOC_013327 (gene) - C. hemisphaerica

Overview
NameXLOC_013327
Unique NameXLOC_013327
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000460:201477..205506+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013327 ID=XLOC_013327|Name=XLOC_013327|organism=Clytia hemisphaerica|type=gene|length=4030bp|location=Sequence derived from alignment at sc0000460:201477..205506+ (Clytia hemisphaerica)
TTGAGTTTTCTTAAATTCTTTTCGACCATATAATCAACGcagaataacat
ggtattctcgggtgattttggattaataacccctcgtttagatgttttca
atgaacctcggggttcTTAATCTCAAATCACCctccaaaccatgttatta
ctagtactaacATCTACATTTCTTTCTAAATTtcctatgaaaatcaaaaa
aaactattaaattgaaagaaattataaaaaaatctgaccCCCCAACTTTT
GGGTTCGCTAGAAAGATCTATCTTTTCAGCGTAGAAAAATGTTTGGTTCT
CAATCGAAATTCTGGCAGCCGAAAATATCGCTCCaaaaagtgtcaaattt
gtttGCGCCATTAAAAAAGTACTTATTAGCTATAAATTATTCCGAGGATA
TTAATTGTaatgtctagaaaaaaatctaattataccaaagaaatgaaaaa
aggaaaaaaacaacttttctgATTATCCGCGGTGATAAAATACCCTGAAA
ATATGCGtcgcatttttgacgacggtTTGAATTtagcgatttctttgttt
tcgagtgatacttttttcaaaatctaacggtaaattttactttcaatctg
gcattTGCGTAAAAACCAGGCGATCCGCGCTAAGCTGAgcaacttaggta
ggatttagcggcttcaaatcctacctaggagattcgcttctagcctttcg
ggctctTACTTTATTGATTCTGTCGTCTATTTTTCCTCTAGCACCACATT
CCAAATCCAGAGCAACACCGAAGTCTTTTTGATCCCTGAATGAAGCTGAA
AAACCTAGATTTTGTTTGTATGCATATCCACCCTCATATGATTGGGAAAA
ACactaataaaataaaacacaagataATTCAAAATTCCTATCCattaaaa
acaagaaatttcCCATTCCCGTCGACTTTTAGCTCATCCATTTCATCTCC
AATGGCTGAGAAATTTTCATCGGGTCACTGGGACAGGAGTATTTACATCT
AAAACTTTCAAAAGAGAACTTTTCGTTAAAAAATctgtttttggaaaatt
aaaaGTCTAGTAATAATTTTATTATTGACGAATTGCCTCCACGATTAATT
CATTAATTAAAAGTCTAGTAATAATTTTATTATTGACGAATTGCGTCCAC
GATTAATTCAACCAATAAGACATCGTTCCTTAGCTTAAAATCACCATTCA
TTTTTTCTGAAGTATCCAGACCTTCCACCATCAAGCATTTAAAACCAGCA
TTATTCAAAGCCTGTGTAATCTCTTCCTCGGTACAACAGAAATCAACCAG
ATTGAAGGGAGTTTTTGATGTCTTATGCAGAGTGATAGGTATCCCACGAT
CTTGTTCAATTTCATCCGGTAGAGCTACACCGTCTTTTGCTTTTACTGTA
TTTAAAATAAACCGGAATGACCCTCCTTTTTTCAATTTGGCTGCAAAATG
TCGAAAAAGAGTTGTTAAATCGTTTTGGTGTTTAACATGAATAGCATATG
TTGCAAACATAAAATCTAAGCTCTTGTCCGGAAGCTCCGTCATATTGAAC
ATATTCATAAGAGCAAAACGAAGATTAGCTAATCGGGCGCCTTCCATTTT
AGCCATTTCCAAAAACGATTCACTAAGATCACATCCGATGATTTCACTCT
TAGGGTTAGACAAAGCTAGATGATAGGCAAACTGACCATAACCGCAGCCT
ATGTCAAGCATGACCATGCCGTCTTGATTTACAGGGGATTcttgaacaaa
ctttttgatatgaGGATCATCATTCATTCTTTGAGCCAAACTTGGATAGC
TTTTTGTGACCACATCGTCGTTATATTGAAACAGAAGATTCGCAACTTCG
GGCATTgttatttttaataaataatatGATAtctaaaatgtaaacaaaaa
cataTTAGTATTAAATACAATAAGAATTTACGGCGATTTTGTTGGTATTA
TTTCCATAAATCCAATAATTTTAGGCGTTCCCACAGCACAAAAATGTGTA
GATAATAAAACTTTCATCTTGCGCCTATATCCAGATTTATTTCAAACGAA
AGGTACAAATTAATTCCTACGGGGTGCTAGTCTGAGTGGTAGACCACTAC
AAAATAGTAGTAGTACAGTGTGTTCCGCAAAAAAGNTAATATATCATCGA
ATAAGtctaagaaaaaagaagaacataTTTAATGTACGTATCGTAAAGAC
TAACTATTGTAAAAAAGtaactaaaaactaaaactatAAAAAGTAACTGT
TGTAAAAGACTTAGGAATGGCCGATGCCTTTTAATTAGAAATATTAAGGC
ATACTTACACTCGCAAGTCAAAAAGTATTAAGGGTTTTTTTCGCGTTCAG
GAGCCTTGCTTGAATGGATATTTTCTACAAGAGAACGGTTTCAAAGATGG
TCTCGATTATTCGAATCTCATTTCGATATTTGTAATCATCACTCATCTTG
CTTGACCGGTCGAAATATTGAGTATTCCTAATACACCGCAAACCACTCTC
AGCTAGAGCATCCATCACCTCCTCTTCAAGAACTCCGTAATTCGGTAGTC
GCCAAACTTTACCGGATAGTCTACCTAAAGTCATTTCAAATACNTTTTTC
TCATAATTAATTCACTAAAAAGTAACGTTAATTTCAAATtggaagaaaga
taaaaaatctaaattttaatgcaaaagaaagaaaaatcattctTCTTTCC
ACTGCTGAAAGAATTCCTTTGGAAAAGCCTTTTGTTAACGAGATAATTAT
TTTCCAAGCTGCACAGGTCAATCtttcaaaatgcaaaatttcatcaaatt
gacaaaaaacagacctgtcaatcaaaaattaattaactcTTTGGTAATAA
AAATGATGCATCTCGACTTTTTTTAAACTCCAACAGGGTGTAGTCTAAGT
ATCATATCTCattaaagaagaattttttcGAAATGATATTTGGACAATAG
AAAGCTGAATAGCTGTGCTTTCAgtagttttaaaaattattcaaaacaga
tcatcatttatttcaaaagttgactttattcatttgagtatacttttttg
cggAACACACTGTAGTTTAAAAGAAACATCATTCGCCAGAGGATACCAGT
GATCTAACACTATGTAGAAAAATACACAATATATAAAGCAATCCAGAAAA
TTTAATATATCATCGAATAAGtctaagaaaaaagaagaacataTTTAATG
TACGTATCGTAAAGACTAACTATTGTAAAAAAGtaactaaaaactaaaac
tatAAAAAGTAACTGTTGTAAAAGACTTAGGAATGGCCGATGCCTTTTAA
TTAGAAATATTAAGGCATACTTACACTCGCAAGTCAAAAAGTATTAAGGG
TTTTTTTCGCGTTCAGGAGCCTTGCTTGAATGGATATTTTCTACAAGAGA
ACGGTTTCAAAGATGGTCTCGATTATTCGAATCTCATTTCGATATTTGTA
ATCATCACTCATCTTGCTTGACCGGTCGAAATATTGAGTATTCCTAATAC
ACCGCAAACCACTCTCGGCTAGAGCATCCATCACCTCCTCTTCAAGAACT
CCGTAATTCGGTAGTCGCCAAACTTTACCGGATAGTCTACCTAAAGTCAT
TTCAAATACGCGCTCTTTAAGATACTCCTCAGATAGCGATGACCTATCTT
TTGCTGGTAGTACgcaatttgttaaaaatttgaattttccatTTCGTTTT
AACTTCGATGCAATGTGTTTAAACAATGGCGTCAGATCTTTAGGATTCTT
AACGTGAAGGGAATAAATCGACGTAATCAAGTCGAACCCATCATCCTCAA
TTTTTTCCGCATTCATATGATACATATCCATCAATATGAATTTGGCATTT
TCAGGGTTTGGTTGTTTAGTATTAGCAACGTTTACAAAATGTTGGCTAAC
ATCAAAACCGATGATTTGACTTTGTGGATTCAGTGAAGCCATCCTTTTGG
CAATCGCACCAGTACCACATCCAATATCCAACACCTGCAAAAAGAAGAAT
TGGCTAATTTAGAGGTTTTGCACATTTCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023718TCONS_00023718Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000460supercontigsc0000460:201477..205506 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0	0.01	0.07	0	0	0.55	0.23	0.84	0.56	0.45	0.1	0.37	0.24	0.37	0.38	0	0	0.39	0.19	0	0	0	0.1	0.22	0.12	0.64	0.19	0.07	0