XLOC_013342 (gene) - C. hemisphaerica

Overview
NameXLOC_013342
Unique NameXLOC_013342
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000461:62286..66502+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013342 ID=XLOC_013342|Name=XLOC_013342|organism=Clytia hemisphaerica|type=gene|length=4217bp|location=Sequence derived from alignment at sc0000461:62286..66502+ (Clytia hemisphaerica)
CCAGAAAATTTGGTTCTGGAATTTGAAAAGAGGAACAGAAAGAGGAATTT
ATGAAAAAGATTATTCTGAATctgcaataaaatattttgaagtggACTCC
GGTTATATGGTATGAAGACGTTGAAATTCTAATTTACAGGCCCGtggagg
gggtactagggttggcggatgaggggtatgaGCGGATACGTGACTTCcta
aaaccgacccttagagacaTTGACTTTTTCCGAAAAAGGTGACTCTTAGA
GAGACAAAATTACTTAAAAAGTACACTCATttcgttttataagcataacg
tttataagcatactgaagctcaaatttccagaaaaattaagcatatgcta
agcataccttgaggctcaaccaaagaaatttttagaatcataatttccaa
aacttcaaaaaataccagaagaatgaagaagaaaattacaaacaaaattg
gtgattttatttttgtttaatctcttataaataacacaacttataataac
aacaacatttgaaaacaatagaatgtcttcatttctctcaagattaaaga
taggggaaaatgcgcgaaattttttacccccttcataatttttttaccaa
gcatagggttaagcatagtcgaggctcaaaattgagctttacttaagcat
agtgagcttcagccgaaacttaccgtatgcttataaaacgaaATGAGTGT
AACCCTCAGAGAGACATTTCACAAAATTTCTTcgattttcaaaacaattc
tCTAAGACTTTCGAAAAACATTCTTACTTTCTTAACTCTTCGTTCTTCTT
AGGcttgattttgtgaaaaaaaactcTTATAGAGGCTTCATGAAGCCCAA
TCTAATTCAAACGAGTTATAGaccaaaaatgatgatttctaactcaaact
ggacattacaggagggcttcgccctcctacatagcccatgacCAATATAC
TCGTCACTTAAAAGGTTAAACGAAATAAATTATGAACAAGTAGTGTTCTT
TTAATGtcattcaaatattttgatatgAATAAATCGAGGTAGTTGAATCT
GATATTACAGTATCCCAcacctctttaactcgaaaaagttttttggtcCC
TCAATTAACAACACCTTATAAACCAATGTACACCCCTGTGCCACAGACCT
GCTAGAGCCCGAGCGCCTctggaaaatttagccaaaatttcttccgcggt
ggcaaaaataccctaaaatttcagccacactgagaaattgactttgtttt
catctctatttgaaattcattgaGAAGAAATTTCACTCCAAAAGCATCTG
CACTGGATTTTTTCGATCTGGAAGCAATTACTACATTATTGGGGAAAAAC
TTCGTCggagaaaagtgacgaaattttggccaaatgacgaatatttttcc
cagacgaaaattttccccggccttaatgcgtttaccaactaccagcaagt
gacgaatttttttccccgacgaatattttccccgaccaaattttccccga
taaggtatcccCATTTGGACATCAATAGAAATTATCATCCGCATTGCGGG
AAGAAGTTCCACctgggctgcgagacaggggagTTTTCTGGTCCAAAAAA
GCATTACAAACCATCTCCATAACTTCCTTCCATCATTCATTCCCTTTTTC
CACAGAGTTCCCCACGCGTGTTTGACAAACGGAGACATAACTGTAGTTTG
TTTGATATTCAGATTGTCACAGGATTACCAGCAAACTGGGCAGGACAGCT
TGTTATTGCAGTGTTAAACACAGGAAAACACATCGTCTTCAAAGTCACTG
GCACAATAACATGTAAGACAGTACCAAAATTCTTACTTGATTTGAAACAA
Tttgacattttcataaattacgtcacgaacatcacttacctcatattcaa
acaattttcttGTTGATCATACATCCCTTGagatattaaattattttttt
ttttaatataacgTAGTTGCAATAAAAtatgctgggagttaatcatcatg
gcaataatttcaaaacgaggcaagtgatgaaaaggtctatttgaatTACT
GAAACGTGTGAATCCCAAAACTCGAACCGAGTCCCTTAGTTAACTTTTTT
GTGATTCTAATAGAGCTTACACGTTAGAattttactttttgataaataac
gagattgctcacgggaattttttgacccgcattCCCCGCGATCGTGTTTA
ATCGCCCGTGTGTGTACGCTCTGTGAATTCTGTCTGCTGTATAATGGGTA
CTGTATACAAGAAAAAGCTCCTCTCTTCAGTCATTTGAGAATTTAAGGAG
ATTGGAGAGTGTCCTAACAGANCTACAGATCATGGCGAATAAAATTATGG
TCATCCGTATTAATCATTGTTCGAAATGTGACAGGTTGAGTGGCCGAGTG
GATAAGGCGACGCACTTGCTTACAAGGGAATGATGTTTTtgagagttcga
atcctataTGGTACGGTGAAGTGTGtgtcattttgtcagcattggccaaa
ctttttctggttttatgagctcttattgatatttttgaaaattcccgtta
tttttttaagaaacaaaaattNgaaaaatctagatattttgaccaaagct
agaattttgaccattttttacaCGAAAAGGATAGAAACttttggggaaaa
tgcactctaagggtatgattttcactgatttttgctgcactgtaagggtg
caattttaaaagccaatttttggcccgcacataccgtcNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAcgc
agctaaaaaatgattgacggGTCTAAAGTATGATTGACAGGTGCGGGTTT
GCTCGCGCGGGTTAAAAATtctcgtgagcaatctcgttatttatcaccAT
GTAGAATTTTATCACTAccatcaataaaatcaaaaaagtggtgcaagtgg
ctctgCTTATGAGGttgaccgtagcatgaaggtagagcacccagctacgg
tgcgcaaggtcaTCGGTTCGATTCCCAGGCGGGGCCATACCAAAGATTAC
CAAAATGATGCTTGAAGTCTCTCTGCTTGAtactcagcaactaaagagac
ggatcaagagTAAGTGGGGAAATCcggggaaaggagtggcgccctccttt
accttcgggtagacagctatacgaaaagggagtcTTCGGGGCGccttcga
ctgcggtcgcaaacttacttactcaTAAGAGGTTGACAGATCATATAGGA
CAGTAAGGGAAAAAGGGTTTATCAAGTGAAGTGTCTCAGATATCAATTGG
GGGGGGGTTAAGGTATGAGATTGACAAATCATATCGTAACCTGTTTGAAG
GCTTGGCGAAACTTTATGTGGTGACTATTTTCTTCTGCTGGCTAATGATC
TGTCTATCTTCTCAGATCCTTTCGATTTCGAAAGTATTTTCACAAAACCA
ACTACCACTACAACTGCAActacaacaacaataacaactgCTGCTCCAAC
TACCACCACGACTGATGTCCCAAAGACCACGTCCTCAATagctacaacaa
caacaacaacaacaaga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023747TCONS_00023747Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023747-proteinTCONS_00023747-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000461supercontigsc0000461:62286..66502 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	6.41	9.47	0	0	0	0	39.53	19.96	0.23	0	0	0	0	0.22	0	0	0	0