XLOC_013424 (gene) - C. hemisphaerica

Overview
NameXLOC_013424
Unique NameXLOC_013424
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000464:114820..120476-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013424 ID=XLOC_013424|Name=XLOC_013424|organism=Clytia hemisphaerica|type=gene|length=5657bp|location=Sequence derived from alignment at sc0000464:114820..120476- (Clytia hemisphaerica)
TTGACCCCGGGTTACCAAATTCAAAAGCGCTTCCCACCGGATGTTCTGAT TGGTTTAATTTTTATTTAAACTTGTCACCAGGACGTAGAGCTATCTTTTG GTACCACGTTTGTCTGGCGAAAGGACTACTTGGCTTCTCGAGTTAACTTT TTCTGACAAACTTCAAAACTTTTGTTGGAAAAAAATATTTTTTCTGGACA AACGTTATATCAGAAGAACGAGGAAAGCTTCAGCTTTCAGAATATATAAG TGGTTTCCTCTACTTTTGTTCCGGCGGTAAGCGCTGAGCCAAAGTTTGGA GGTATGTGAGTGATTTTTTTCTCTTTTCATATTTTCGAAAAAAAAGTTTT GAACTTTTTTTCTTTCTTTTTTCTGTGTTTTTTTTTGACGTAATGGAACG TTTCTCTTGCTTTTGATTGGTGGGAAATCAAAAATGGGGGATGAAAACAA AAACAAACTTTTTTCTCTGAAAGAGATGGAGAGTCTTTTTTTCAAAAAGG AATTGCCTGAGTGGTGGAATGTCAGCATAAATAAGATAAGTTATAGAGTT TTGGAAGAAATATTTATTTTTATTGAGAAGAATGATCTATTCCCTTCTTC CATTTTGTTACCTCTATCCAATTTACTTGGCACTGATGCCACTCTATTTG TCAAGCATGCAGGCAATTTTAGAGTCAAAATTTTAAATCACATCAAGAAA AGTGCCGATTGTCTTGATCTTCTCGTGGAATGCTTGTATCCAACTTTGCA AGAAGAAGGATTTATTGGTCAGGAGTGTAGTAAAGTAGGTTTTTTTGCAA GGAATTGAACAGCCAAAGCCTCTTTGACTGTTTTTCTGAATCCGGCAGGA AAATTAAACTGACTAATGCAATGATTCTTGAGATAAGGTCACACTGTTAT TCGGTGAGGATTTCGTGGGAAAAATTCTATCAACTATTTAACTTGCTCAT GCCTAGCGACACTTCTTTAAGATGCTTCCAAAATGCGTTAGATGTCCTGG TCAGAATGAAGCAAAAATTGGTGATATCCCACAAAAAAAATGCTGAAGGA CGTGAAAAATATCTTAGTTTTTGCAGCGATACGTTTTCTTTTCCTACGCC GAACCTTAAAAAACAAAAGGCACAGCTTAAAGAAAAGTGTTTCTCTGTGT GTGCTAATAATGTCAGAGAATATGACATACAACCTGTCCTAAATCAAATT GCTGAGCTGGAAAATCAATTGCTCGTTTTGATGGAATGCTTAAAAGAAGA ATCCATTGAAAAAACAAATATAAGAAGCAGGTCAGGTCTTTGGAAGATGA GCATAAAAAACTGTCGTCAGATCTTCAAAATGTATTATTTAAGGTTGGTA GATTTACTCCCAGGAAAGTGGGTAAAAGGGAACATCGAGCTGATTGTAGA ATTTCAGATCTCGAAGAGGTAGTTTGCGAAAAAAAGTCACTAATTTCAGG CCTTGAAAAAGAAAATGAAGATCTGATAAAGAAAAATGAAGATTTGAACA AACAATTGTCATCTGCTTTGCTACATAACAATAGATGTAGAAAAAGAATT TACGACTTAAAACAAAAAAAGGAAAAAGGAATTCCTGAACTTGCTTCAGA ATCAGAAAATTGTTTTCAATCTCGCATTCGAGACCTGAATGCTGAAATAG CCTATTTACAGAATGAAAAAATTGAGTTACAATCTCAAATTGATAGTTTT GTTGAAAACAATGTAATAAATGTCTTTGAGAAGGGTGTCTACACAGATAA CGTTCGAATGGTCTATGAGGACCTCATGTGTCTTGGCATAGGTTCCCGCA ATGTGGAAAAAGCAATAAGGACCGTGCTAAAAAAGCTAGCAAATCTTGAA GTAGGTAGGCTCCCAAAAGCTACCTTTGCAAAATACATGCTTTTAGAATC CCGTGCATTAGCCCATATTCAACTTCTATCTGAATTGACAGGGGACAGCG ATGATGGTAAGATTTCAGACCAAAAAACATTAATGTCTGATGGCACTTCA AAGAAAGGCCATTCATATGCAACTTATGACATTCAAACTAATTCTGGAAA ATGCTTGGTAGCGGGTGTAAGACCAACTAGTAATGGTGAAGCTGAAACAC AGCTTCACGTCTTGAGAGAAATTTTTGAGGATGTTTCAAGCTTTTGTCCC AAGAAGGATGAAGACTTTTCAGCTAGGCTATTTGCATCTATTAAAATTTT GTTGAGTGACCGTTGTGTCACTCAAAAGAGATTCAACAGACTTTTTATTG AATACAGAAATAACCTTATTCCCCAGATCATGGAAAATTGGGACAGCTTA TCTGAGGATGAGCAAAACGAATTTAAGAAGGTCAACGAGTTCTTTTGTGG TTTGCACGTTATAGTTGGACTTGCTGACCAAGCTGATGAATGTTTGAAAA TACATGAAGGTATGCTCTACAAAGAGAATAAAGTTGGCTCTTTGGCAACT AAAAATGGTTTCCCTGGGGGTGAGTCAGGAACAACACGTCTCATTCGTAC AGTCTGCAAAGCTGTGTCTGATAGAGGTTGTGAAAAAAGTGGCCGCATGG TCACTTTTGCAACCTTTCTTGAAGGAAATCATGAGCTTGTAAATAAACAT ATTTTCCCATTTTTGGGAAACCGATTCAACATACTGTTTTTAAATGCAGC TGGGGTATTCTTCTTGTACCATCATCTTCTTGAATTTTTTGGTAATCTAG ATGATTCCAACAGACTTTTGAATGCAGTCAATGATGATCTAATTGTATTA GCCTACAGAGTAAGTTTTAAAGCACTTGGTCTAATTCATAAAAAAGTAAC CGGTCCTTTGTGGCGCAAAATGGTACAAGTAGAATCTAACTTGCAAATGA ATGAACATTATAAACTAATGGTCCAGAAATTTGAGCAATGGAGTAACAAT CCATCTCCTTTTATATCCGGTGGTGACTCTCTCTTTCCAAACTTAGTACA CCAAGACGAGGTGTATGAAAAACTGGTTGCCCCTTTTGACCATGATGAAT CCATGGTCAAACCTCTATTGGAGATTATATTCAGTAGTTTTGTTAATCTA AGTAAACGAATGTTATATGACCACCTAGAAGGTGTTCATGCCAATCCATC TGAGTCACTTTTAAATGAGGCGAAAACAGTCCCTACAACAAACGTGAGTG CCGAAAGAGATTTTGGCATGTTAGATTGTTTGATGAAGATGAAACCAAAA GCGCTTGACTTAGCCCTAGAAGGGATTATTATGTTTCGTGTAAACAAGAC ACAGGAATGGAGAGATAGGCTTCCCCCTGCTCGACTGAAGGAAGTTATTA AAATAGCGAGGGAAAGTAAAAAACGACACACTGAAATGTATGTCAAACGA AAGTCTGATATTTTCAACAGCCGCTTTGAGAAGATGCAAAATGCAGAAAT GGAAAAACGAAGAAAAGCTAACAATCTTTTGGACCTGAAAGAACGTCTAA CTTTAGACATACAGCAGTTTGGGTTGTGGGTAGATGAGTCTCAAATTGAT GAAGGTTTAAGCAAACTTGACGGTGTTAAATCAAAACGACAAGCTTTGAA AATCCAACTTGGTTTCAGAAATAAGGTTCTTGAAACTAAATGTGAGCGTT CTTTTTTCCATCTTTCAACCCAAGGTGTGAATAAGCCAATTGACGAGTTG AAAGCTAACTTATTGAAAGTTATAGGATGGGCAGAACTAGAGGTTAGTGC TTCTGGTGAACCCAAGATAGATTTTTCAATCCCTGTATCTATCTCACACG GTGTCGTTGACAGCCAAAAAAAATCATATGAAGATAAGGCTCATGAAACT TCTGAGAAGCTCTCAGGGAAAAAAAACACAAGAAAAAGGGGAAAAAAGGA CAAAATCTCAAGCTAAAAGTAAAGCTTCCACCAAAGCCTCAAAGAAAGTT AAGAAAAACATTGTCAACTCTTCTAGTTCGAAATCTCCTGTCATTTCAAA CCCGCACGATCGTATTGTATTATTTTTTTGTGAGAGGGACACTAGAGAAG ACTGGTACAAAGGGGTGGTAATAAGAGAAGAAGGGAAAAATAAGAAACCT AAATTTCTTTAGCAGTTCTATCAAGATGACGAAGATGGAAATGACTTGAT ATTTTCAACTCTATATGAGGTGTTGACAGTTTAGATCCTCAAAACCCAAA TTTTTTCATATATTTTCCTTCTTCAGAAGGGGAAGAAGTAGCTGAAGAGC TAAAATACCACTTGGAACCCCTTTTAGAGTGGTATTTGGAAGGTTGGGTG CGCTTCAGAGATTGCTGTGCTGTCTGAATAAAAAGTAAAACTGAATCACA GAGCAAACCACTTAAAAACTGTGGAGTTTGCCACAGCAACCAACTTGAAC TTATTGCAACTTTTTGCTAAAAGTGATTTCCCATCTTTAAAATGTGGAGT TTGCCTAGTTTCCGAGGGGGCAAACCACTAGGACCAGCAAAAATATGTGG ATGTGCTGGACTGACAAGTGCGAGGAGGGGCACTTGTCTTGTGGGTTTAT CAAAATTTTATTATTTGGGTCTCAAAACACTGTCTTAGAGAAATGAAGAG CTTCCTTGCTTAGTTTAAAAGTTACACTGCTGGCCAACCACAATTATTTT TAGTTCCATATTTTTTTCTCGTTTAGATTGGTGACCCTACAGGATAACAA AGGGAATGGGTTTGTATTTATACAGGTTTGTATTTATACAGGTTGACACA GACAAGATGATGAAAATGTACTTTTTTGTTGTAGATAAAAAGAAAGAAAG AAAGAATTTCTGGAATGTCTGCTAGAAAGCCTAGAAAGCTGAAGCCAAAT CCAGATCTCAGATCTCAGTGGAGATTTGCTCGGACGGTTGTTGCAAGATG GGAAACTCCCGCCCATGGAGGCAGATACTGAGACAGAAACGGAAGATAAA GGAGAGAGTCCAGAGGTAACTGAATAAATTCCGAATTACAGATTGCAAGA TAAAGTTTGAGTTGAGGCAAGATAACGTCAAGATGAACCCTTTAAGTTTG TAAACAGTTTTTTTGATGGCCTTGCAGTGTAAAATAGAATTGTAGGAGAT TATAGAAATTCCACATATAATGCATTTAAATATTGATCTTGATCTTTAAA TATCACCCATGGCAATCAATTCCTGAAACATTTGACATACCAAACGACGA GGCCATACGTAACGACGAGGCCATACCAAACAATGATGCCATTCCGAACA ATGATGCCATTCCGAACAATGATGCCATTCCTTACAACGATGCCATTCCG AACAACGATGCCATTCCGAACAACGATGCTATTCCGAATAACGAGTCTAC CAGTAGTAGTGACTATGAGTCCTCCAGTAGTGACTCGTCAAATGGTCAAC ATCAAAGTCTGGCCCAACAAGGTAGAAATCGTGGCCGTGGTGGACACCGT GGTGGCGGCGGCAGAGGAGGGCGTGGTGACGGTGTCAACAACCCAACGCG TCAACAGCGCCGTCGTGAGAATCGGCGTCTAAGGAATAGAATTGTAAACA TTGTGAACGCACATTGTGAGGTGCTAAGTCGTTACTGCTAAGTCGTTACT GTTGAAACGTGAACACTGTAGATTTTGTTGTTTTTCATTGTTTGCAGGTT TTGTAGTTTTGTAGTTTTTTTATTTTTTCTATTTTTTAGACAAGAAAGGA TTTTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023882TCONS_00023882Clytia hemisphaericatranscript
TCONS_00023881TCONS_00023881Clytia hemisphaericatranscript
TCONS_00023880TCONS_00023880Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023881-proteinTCONS_00023881-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000464supercontigsc0000464:114820..120476 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.28 0 0 0.04 0.17 0.37 0.27 1.51 0.66 0.61 0.52 0.95 1.19 4.08 4 7.17 4.87 3.25 5.55 4.13 3.87 2.3 4.48 0.14 0.09 1.27 1.07 2.06 2.21