XLOC_013571 (gene) - C. hemisphaerica

Overview
NameXLOC_013571
Unique NameXLOC_013571
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000478:119208..125062+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013571 ID=XLOC_013571|Name=XLOC_013571|organism=Clytia hemisphaerica|type=gene|length=5855bp|location=Sequence derived from alignment at sc0000478:119208..125062+ (Clytia hemisphaerica)
GTATTGATTTAAACGGACCAATAATTCATATAATTATCAACATTAATTAT TGACAACTATTGCTATGGTAACAACTCGCGTCTgttagatgaaaaaataa tatgtttTTGCTGAAGTTTACTTTGTATCATAGTTTCAATGGAATGTTGG AAAATCTGCAAACATTTAGATGAAAAACGCAGCTTTATTTGAATCGTTCA TCAAACATCAaccacaaaaaagtcataactcaacaaaaagaaagtttgaa ttAGAAATGGTACCGAGTAAACATTCGTAGAGtgtagagaaaaaaattat gcgttgtcaaataaatacttaaTGGTTATTTTAAAATGTCGGTTGCAAGC TATGATAGGACACATCCATCGAATTATTTGTCTAAAACTTTCGAGTCGAA TGTTTTGTTCAGTCCCGGTCAGACGGGCAGGCGAACAATCTCAAACgaaa agtaagtttttttctCTCTATATGTTCCAGTTTCACTTTATTATATCGTC TTCAGCCATAATAAtaaagtctctttaactcgaaccaccaaatttttcga gttatagaTACTTAAGGTGGATACATAACTTTCTGATTCGTAAGTTGtcc aaataaaagaaaacgtTTGACCTTTAGAGGGGTCGTTTGACGGGTTTGAC GGCATTAGTCCTTTTTTCGTCGGTGtttcaagataaaaagtgacggtatt tcggtgtcaaaaGTGCCATGTGGTGacaaaataagaatttgaaaatACTT GTTGTCGGTGTTGACGGTGATCTAAGAAAAATACGTCGGCATTTAGGTGT TTTCGACCCCCGTATACGACTAAACTTCTGTGTATGATTGTATGagggtt gaaaaattttctagGGTAGAAAGAAGGAAAGGTATGAAGTGGTTTAAAGT GTTGTTCTCAGTCAAGGAAATTCAACATTGCTTAGTctttaaataaattt caaatactttttgaaatagagcacttttaggtaaaaataaatagaaaatg acCCCTACAATCAAACACAAAGAAAGAAATTGATCCCACTTGGTTCTTTC TaacacacgttttttataagaacattcaattTTCGGagcctttgaatgtt cttacctttttgagttcCAAGCCTTAAGAAtattactttataagaatatt catgatgaaataagccaaaattaagaatatgcgcTAAGAATACCTGCATC ATGGAGTTTGGCAACTGagcctaagaatgccatttttagagcattttacc atgaaattgccaattattcccCAGTAAGCTAAAAGGTTTCACAAGAATGC CACATTTTTGCTTCAGGTATGTATAACATGCTAGATTTTGGCTGGGTTTG GGtccaaacctaagaataccgttaAAAATATTCATCATGAATCGgaaaaa cactattcttataaaaaaagcgtgtaatgttTTTTTCCGTTTTGTAGGAT AGAAGTCCCCGATACCTTAAATGttattttgttcttaatattttggccat cgaagtgtTGTCTTCTAACATATTATAGTTTGATCTTGAAAAAAGTGTAA TACAAATCTCTCTTTACCTTACATCAGTTATGTGCGGCAAGTAGCCAAGG ACTTCTACCAACCACCGACACCATGGGGCCGCAAGAACAGTTACGGGGCA CGCAATTTTATCCATTTAAAAGGAACACCAAACGGTAATGACATGGTGAT TGTTGCTAAGGGTTCCAAACATTTTGGATCTGGTATAACGTCAAAGCCAA GGTTTGTCAACTCCATTATTTCTTCCTGTTATCTAGGTAGATATAATATA TACGTTTTTAATCGATTGTATGACACTATGGGTGATCTTATAGAACAGCT GAGAGTTAGAAATATTGTAGATGGCCCCGTTTCTGGTGACTATGATCTAG CTGTACGAAATAGAATACACGAAGATATTATCTTTAATCCTTGTAAGGCC TTACGGAGCCTTATGGTAATCAGCGCTTATAGTCACCTGGAAATcaccta gtctgaatcgcagacctctacaaaaccccaggtagtctATGAGGAGCACA AATCCGTGGGATGGCACTCAAGGTAAGTGACCTATCGTAGGTGAGGAACT TAAGTGTACGCTTTTCAGTCCACGCATAGTCCACGGTAGTTTTCTGATCG AATGACCCCGAAGAAAATCAGCATTACCATAACAACCTGTGACTTCACTT TTTAATGCgaaaacttttacttttatttttcagagGCGTTGTTATCCAAG AGCAATACCAGATCACACCTTACATCAAAAATAAGCTACGCCCTGATGAC GAACTGTAAGGAGACATTTAATTTTAATACTTTTGGGTCGATATGCTAAA CAGGAGCACCAGtacagtggcgttgtgggaaaatttttctggaggggcca aagtcaatttttttaaaatggcgcccccaattttccaaagtggcgcCCCC ACCCATCAGTTGCTGAACTCTTACCATTTACTAATTCGTTTGCCTAGGCA TAACGAGGAaagaaatatttagtggataaaagtagatatatctttgataa aTGGAAAGGGGAAAAACAGgtcccaccatggttggggccgactagaaaat ttttgaaaatcgactgccaagataccctgaatcactaaataaaaatagac aaatttcatattggctagagtgaaaagaaacttaaagaaacaatgtgcaa atgcgagcgaagcgagcgaaaaaatttatgtttcgcgatttcaatattgt tgtcagcaaattgatattggggcgcagttagatttttattcaataatgct attgtacacaaaaaaacttttaagttAGCTATATTACAAAGAACTTACCa attaactttattgcgagcgaagcgagcgagaaaaaaaattgcaagtaatC TCAGTgaaattggtcctgggcgcaatttcAGGAgtataaagtatgatttt taagattggggcgtttaaaaaatcttttggcgccccttgctcttcggcgc cccttcagcaaagctccgctggggggccatggccccccggccccccctgc cacaacgccactgaagCACCTTATTCGATTCCTTATTATTCTATTAACTA AAATATTATCCATGTTATTCCCTGGCAGgaccgaaaaaaattttaaagta tGAGTACTTATCAGTAATGTACTTTTCGACCGATAAGATTTCATTATTTt gagggttagggttagggttagggttagggttagggttagggttatcAAAC ATATAAAAATAAACACAGATACGTAAAATAGATAATAGAtaatttaaaac tattttaagtttaaaactcaTAAACATAGTTTTCCTACTTATCTCACCAT AGAATACCAGCTAGCACAAAGGTAGATTTAACATCACACCAAGTGGATCA CAAATATCCAATAGATCACCCATACACTTCACATATTCCCAAGAACGACC TCCTGCCATCTTCAACACCCGACGAAGATGCGGTGTCACTCCAAGATGAG AATTACATCCATCCTGCTGATAGTCCTGCATCTGCACCACAGCCTTACAT CCATTCCAAAACCAGAGGAGCTCCCTACCGCCATGAATTGATCGATATAC CGTTAGATTCCAAGCGCAAACCTACGACTTGGCCACAAGCTCAGAATTTA CAGGTCAGAATCTAATTGATTCGATTTCTTCTTTTCCTGCATATATAGAA TAACGTATTTCTAACTTGAATAAACAGGGATACGTGAATTGAAAATTGGC GAAAATGTCGATtgagaaaatgttatattttttagtCTAAAGCTAGACTA CTAATTAAcatcagttttactcaaaagctTCTTTTACAGTAGTAGAAAAA AACCTACCAAACATTTGTTTACTTTTCGAGTGTTTGAATTTGTATTCCAA CTTTTCGTACggctttttttcttatttttaactTTGAGGCAGGATTGCTC CTACGTTTTGTGTTAAAAGAATACTGATCTGGAAATCGAGACTATTCTTT TACATgcatatatttttcaacttctaGAGCATCAGAGGACCTGGTTGTCA ACGAAATGTATATTATCCTACACCAAGAACACAGTTAGATTCCAGTCTCA CTCAACCACAACCTGAACGACCGGTTTCCAAGGAGACGTTGAAAACATTG AAAGACGTTAATAAATCCATGATGCAGTCCAtttatcaaaaagattttgt cgGTGAACGAAACGAAAAACCAAAGACTTTGGAGAATGATGAGATTCTAA ATACTTTCAAAGACATGGAAATACAGGTATAaagtaccgtattacttcga ataaacaacgtcttcttttaaacgccccctcaaataaactcCCCCTTCAA ATAAACGCCTCCCTTTTAGGAGGAGGGTTTATTGAAATAATAGCTACATT ATTTTCTCTCCTACATTCCTAAATTGACAAATTTCTACTCAGACAATAAT AACAAGGCAAAATAAGGTTCTAATACTTTCTAATAGTTCTaatttctttt aaacgcccccactcgaataaacgcccctcctaaatatcaaaaaattaata aacgccTCTGCAgtattttctctcaaaatcttACTTCTATCTACTATAAA ATTCGAACGAGAACATAAGTCACATTCCAGCTCGTTGATTAGCTTCGCTA ATAATTCCAGAGCACTTAATTTTAGGATTTTCACATTATcgataaaaaaa tattctacTGGTCGAATTACTGCTGAAATTATTCTTTTTCCTTATTTATA AAGAGCCACCCCTGTTTCTCTGCCCCAACAGAAACCTTTTACTCAGCACG GATAAAAAATCTATTGCTTCAGCTCAACCAGTGGGGGTGATTCAAAAGGA TGATTCCTATATTCCATTTCCCAATGGGGAAGAGATTCTataatattttt tcccaccgggtaTGATATTGGAGCCAAATTTTTCAAGTGAGGTTGGGGCT ACACACGGGTCTAAGTTGTCATATAAAGGCTAAGAAAtgaatttttcctt cttttaatTTGCAGAGCTATTCGGGTGTTCCGTCACACGTTGCTGATGCT ATTGCCTCAAACAAAAACGAAAATACCCTGATGGGATCGAGTGACGAGCC TCGTTTTAAAAGACCCATGTATAAAGGTGTTCGGCCTTACACAACTGTGG gcattttcaaagaaacttcCCCATCAGCTGTGAGCCAATCAGAACTCGCG AAATCAAAGCCAAACCAATCAGAACGCGCTAAAACAGCTCACTTAGCAAC CAACCAATATCATAAAAGTGAAGATGAACCTTTGGTACCCTTTGAGCGAA CGGAATATCAAAGAACTTATAATTCCAAATATCCAGAGAGAGAAGTGCCT GATTTGAGAGCTACTTGGGATGTTCGAAAACCGCTGCTAGAGAAAAGACA TTTTGTACCGATCGGTGAGCGAAAACTTTATATACAAAGGTGATAAAAAA GACAGGAAATCAACAGATTTTGTACCGATCGGCcagcaaaaaaattacat ataaaGTCAATGGACGAAGAATCGACAGAGTGGTAATTGTGTAAATATTA AAATGGGAAAAATGCTTTTTATTGTTCGAAAGTCACTTTAAAGTAAATTA CCAGATGTTGTTTCTTAAGTTTGTAAAATCATTGAAAAGAAACagtttta tgttttgtttcttgAATCACACTGCAAATTTTGGCTAagtttaccttaag ggaacttattttggcgggaagtaATTTTGACAAGCtgcaaaaatcctgaa aatttttaatttgccaaaattagttcccaccaaaataagttcccttaagg caGTAGACAACAAATCCGAATTATAAGAACAGTGAggctcaaaatgtcaa aattt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024178TCONS_00024178Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024178-proteinTCONS_00024178-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000478supercontigsc0000478:119208..125062 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.86 12.72 6.52 5.81 137.83 100.56 74.28 72.06 38.36 57.33 28.2 37.32 19.51 22.63 0.86 1.79 3.32 3.62 53.95 61.56 7.5 7.93 6.28 7.26 14.43 15 0.28 0.36 0.92 1.54