XLOC_013647 (gene) - C. hemisphaerica

Overview
NameXLOC_013647
Unique NameXLOC_013647
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000487:133490..137726-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013647 ID=XLOC_013647|Name=XLOC_013647|organism=Clytia hemisphaerica|type=gene|length=4237bp|location=Sequence derived from alignment at sc0000487:133490..137726- (Clytia hemisphaerica)
GTTCTTTAGGCTGTTTGCTCAAAATGTTAGCAAATTATTGACATGGCTGG
GTAGTGTATATCATTATAATAGATTTTTCAATTTTTCAGTAATTTGCCAA
TATTTTGAGCTTATCCTTTTATCTCAAAGATTTATCTATTCCATCAAAAG
ATTTTTAATTTATAATATATTTAAATAATTTATAGATTGCACATTTTCTC
CTACTTGATCATAGGAGAGATTCAAACTTGGTAACATGTATGGTTGTGAT
CCCTTGGAAGTTGAGAATAGACCATGTGACGTTGGAACAGAAAACCGCAG
CATGTTGACACTACCTGATGGTCTCGAAATATGCAAATCCAAAATACCAG
GTAAAGACTAATGTATATCTCACAAACATCTCTTCAATAGAGAAGATAGA
GAAGACAAATAACCATCAGAAGAATAACCTTGCGGTCGCAAACTTACATT
TAATTACTATTCTCGTATTAGTGTACATTATACTGAAGACGGCGTAAACC
GTTAAAAACTTTTGTCTAGATAAAAATAGATTTTCTTTTTTGCAATTCAT
GATATGCACCACTGGAGAGTCTTCTGAAAACTTTTGAAATTTTCCACCCA
ATACGTAAACATAAACAATAGAAAAAGTGACGTATTGGGCGGAATAAAAA
CAGAAAAATTACATAATTTTGTAAAGTCATTGCAGTGGTGCATATCATGA
AATCTGTTCATGGAGGGTGGAGGATATATTATTTTTTTTCATGAATTACC
CCTGGACATTTTGATTTTTAACCCTCTGGGCACNTCAATACCCCTGGACA
ATTCATCCATTCATCCTCCACCCCCCATGAACGGTTTTTTTCTGGAAGAG
CCCATTGCAGTGGTGCATATCATGAATACACTTTATAAAAGTGGTTGACG
GCATTTATAAGGACTAATTCTCATTCCACCCCTTTGTTCTTTGAGGTTTT
TAGGTTTTGGTCTGTAATTGAAACTTATGTTTTATTTCCCTTTTCATACA
AGGTGCTGGTATGGGGGTCAAAGCGAAGAAGTTTTTCAGGATAGGAACTC
GATTTGGACCATATGATGGTAGCAAAGTCGTTCCTGGAGAACTCAAAGAT
CCAAAAGTGGATACTTCATATATGTGGGAGGTTTGTTTTGTTTTTATCGC
TTTCTTAGGTCTTATAAAATGTTTTGCTTTTTTCTCTCTCTCTCTTTATA
ATATGGGTTACACGGTACACTTACGAACAAGCTTTTGTAATGTATCCGGC
AGTTATTGTGGAATGGCATCTATTTTTCTCTGAACTAAAAAAAATCCACA
GCAGTTAACTTGCTCTATTTGGGTGTAATGGGGGGGGGGTTAGGGCTTCT
TATAGTAGTTAGACTTGCTGTCCGGGGGTCAAAAGTCAGAATTTCCAGGG
GTCCCCCACCTAAATTTCCAAAATATGTTATATCCTCCACCCCCTCCCCG
TATTGAAATATTTTCTGGAAACGTTCCTTTAATTTGCTCTTTACTTAACA
AAAATCTCTCTTATCTTAAATTTATTTCACAATTTACAAGATCATGCTAG
GCAAGAAAGTTATACATTACATCAACGGTAAAGACATGAGGTATGGCAAC
TGGCTTCGATATATCAATTGCTCGCGTATCGAAGAAGAACAAAATCTGGT
GGCATTTCAATACAAAAGTCAAATCTATCATAGAGCTTACAAAGGTATCT
TCACACTTGCAAATGCATTTTTACTATAGCTTATATTCATGGGAACTTTC
GCGTTTTGAGTTTCTACCGCGAAAATTTCTTTCCTGTGAAACACAATTTT
TGCGGAAAATTCTAAAGAATCCCTGGAAAATTGAAAGATCTTTTGGCTAT
AGTGGCCAAAGTGCAAAAAAAAACTTAAATAAAAGAGAATTTATCTTATA
CCCTCGTACTGAAAATTAGCATCGCGAAAATTATATCACCTTTTTAGCCC
TTTTTACGCCNATTTTGTGGAATAAAGTCACTTTTGGTTTTTGTTATGAT
CCAGCACTCCTAAATACTCCTCCAGATGGATGTTTGTGCCAATGCTAGAT
CAGCATTTCATAAATATACCATTATTATTATTATTATTATTATTATAATG
TAACAAAGTTCTAGGCGCATGAGGGCCTCTGGAACTGATCGTGATTATAC
GTATTTTACAATTGTCTTGTGTTGAATCTTTTCGGGTGTTTAGTCCATGC
AGTGTTGAGTCTTTCTTTGAAAACTTTGACTGTCTTTGCCTCAGCGACAT
CTTTTGGCAATTTATTCCAGGTTGGTATAGTTCGATAAAAGAAGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCCATCGCTTC
CAAAGTTTGGAATCATCTCAAAGTTGTGCCTTCTGTTTGGTCGCGTTCGA
CGGGCTATCTTGTTTGGGATGGTATCTTTTTCGTAATAGTTGACGTGCTT
GTAAAGTTGGACCATGTCACAAAAATGTCTTCTAAACTCGAGCGTAGGAA
GATCTAATTCACGCAATCGTTCTTCATAAGACATATTACGACATTTTTGA
ACAAGTTTTGTTGCCCGTCTTTGTACTCCTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAAACCAATATGGATATTTCACTGAAAATAAGAACATTGTAGGC
TTAAAATGATTGAAACGTTCTAAAGTCATAATTACAATAAGAATATTTTA
AGAACATAAGCCTACAAATTTCAAAGAAATTAAGAACAGTCCAGCCTGAG
CCAAAATTTTACTGGTTCTTAAAGGGATTATCAGATGGTTTTTGTTATTT
GGCTTAGAAATACCTTTCATTGTCCAAAGAGACACCTCTAAATCTTTTGA
CCCTATTGTTTTCTAAAGCTGAAATATTTGACTTTGAAATCTCTAAAAAT
GAGCAAGTTAAAAGAATTGAAAATTCAACGTCGAATATCTCAGCTTTGGA
AAATAATTGGGTCAAAAACTTTGGAGGTGTTTCTTAGGACCACAAAAGGT
ATCTCTAAGCCAAATATCAAAATTCATCTGATAATTCTTTTACAAAAAGC
ATATATCACTTGTCCTTTAGACATTAACATTGGAGACGAGCTGTTGGTTT
GGTATGGTAATGAATATGCCAAAGAATTGGGTATCATCGACGAATGTGAC
GGCTTTGATGATGAAAATATGGATATTGATTTGCGTGGAACAATAGGTAT
CTTCAAAATTTACAAACCGAAGATCTTCCACTTAAATATTTATACAGAGG
GTTGAGGAGTCTTGAAAATTGAGTTCTTAAAAATATGTTGAAACCCCCTG
TGATAAGATATGCACCCCCTCTCCCTGGCTCGTGTGATTATTCGTCTTAT
CACAAAGACACATTTTTCTATTAAAACTTTATTGTCTCTTATCAGGTCCA
GTCTTCGAATGTAATTTATGTCACAACTATTTTACCGACAAGAAACGTTT
GTTGAATCACATGAAAATTTGCATCACACACCAAATCAAAACATTGCATA
CAAGACAACAAAGTAAATCTCAATTAGCTCGTCTACAACTTTGCCGAAAA
CGTCCATCTCTAACTGCAACAAATGGCATCAACTCTAAACCACTTTCCAT
GAAACAGCAGCCTCGATTCAAATGTAATCATTGTGGTAAATGCTTTACAA
CAGACTTAACACTTGATTCTCATAACTGTACGCTACCACAAACATCGTCA
TCAATGAAATGTCATGTATGTGGGCTGAAATTCGAACAGTCATCACATCT
AGAATTTCATCTAACTGTCCATCAAGATTTTGAAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024336TCONS_00024336Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024336-proteinTCONS_00024336-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000487supercontigsc0000487:133490..137726 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41	0.62	0.07	0.07	1.41	1.24	1.36	2.46	0.5	1.11	0.47	1.02	0.71	0.5	0.43	0.49	0.48	0.23	0.12	0	0	0.16	1.35	1.2	1.37	3.64	0.23	0.15	0.59	1.2