XLOC_013809 (gene) - C. hemisphaerica

Overview
NameXLOC_013809
Unique NameXLOC_013809
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000504:95471..101410+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013809 ID=XLOC_013809|Name=XLOC_013809|organism=Clytia hemisphaerica|type=gene|length=5940bp|location=Sequence derived from alignment at sc0000504:95471..101410+ (Clytia hemisphaerica)
TATATCAAGTGCTTGTTCTTGCCACGATGAATGAAATGCTTGTTGACATA CTGCTAACTTTATTATTACTGTTTTAGAATTATATTATAATATAggtgaa agaaaattttaagaatgcCTTTAATTGTGTTATGTGGATTTCCATCGTCT GGGAAAACAAAGACACGTAAAGAACTGGTTAattatttggaaaataaaaa tatcaaagtgaAAATCATCAGTGAAAATGTTTTGGTTGacgaaaaaaaga atgaaatataTTCAGGTATAGtagatattttgatatttttaaatgttATA GCAGGGTCTTTCTACAAAATCAAATTGATTCTTAGCAAATAGGTACCGTg aagtggagggaaacttgcatagccctcaaattaaatgaatgacctggctg gtcattaaatagaaagttaaatcaaaacaaaaatggtagagtagagctgc gggTGAGCCgaatagttcatttgttttgaaattttactgctttgattggt cagtcatttgatggctatgcaagtttccctccactgatgcaagttacacG ACTTCACAGTAGGATATACATTTCTGATTTCATCTTTCAAGGAAATAGTG CAAAAGCAACTTCTCATAAAAGAAATGTCTTGATATTGGatcattatttt gattttaaagtgATTTTTACCAAAACAAGAGCAGCAAATTTGaatcttat ttttgttttcttttagaCTCCACTAAAGAGAAATCTATTAGGTCAGCATT AAGAGCTGCAGTTGAGCGGGATATCACACGAGATACAGTCACCATTGTTG ATGGGTTGAATTACTTGAAAAGTTTGAGATACGAAATGCATTGTATCGTT AAAGCAGAGAAAACTCTGCATTGTGTCATCTATTGTGGAATAACCAAAGA AAAATGTAAAGAATGGAACGAAAGtcgaaatgaaaatgaaaaatatagag ATGAAGTACTTGATGGATTGTTTATGCGGTTTGAACCACCTGATAGTAAC AAAAGATGGGATTCTCCACTCTTCACTATAACACAAGAAACTCCATTGAG TTTTGATGATGTTTATGACTCTTTATACAAACGCAGTGCCCCACCTCCAA ACCAATCAACAATACCTACTCCACTGAGTAGCGGGAATTTCATGCATGAT TTAGATCAAGTTACTCAGTCTATTATCAAAGAGATTTTGGACATGCAGAA AACTGCTATGATAGGTGATAGTATCAAGATAACAGATTCAACCGAGAAAC TTGTTCTGTTAAAGCAACTGAATATGCCAGAGTTGAGAAGAATTAAACGC CAGTTTATCTCATACGCAAAAATGCATCCAGTTGAGGACATGACTAAGCT TAGAAATATGTTTGTACAATTTTTGAATAATACCATACGATGAGTTACTA TTATTTTTTAtaatcatttttagattttacacTACTTTAGTATTATTtaa taaacttttgttttttcgcTTTTACTACCGGCTACCTATGCCAAAGATTT TGTCTTGTTATTGGGATACTTCTAGATAATCCCATCGACACAACTGCCAG GACTTTTCCTTCATATTAAAcaaattattcaaatattttacACTGATTTG CAACTTTTTTGAGAAGATTTCTATACCGGGACTTTAAGATTATGTGTACT CATTATAATAATATGCTTTATTCTAGTTTAAATACAAAGTATGTctataa atgaaataataacATTACAATTTGGAAATTATTCCAATTTTGTTGGGACC CATTATTGGAATTCTCATCAAAAACGATTATTAGAAAGAGAAAACTCTAC AGAAGATAATCGAAATTACATCACTAAACTTTTCAGAGAAAGTCAGTCAA GTCGCACACGTTTTGTGCCTCGGgcaatttgttttgatctgaaaaccAAG CTGCAAACATTAAAACAAGATGGTACCTTTGCTGATGAGGATGATATTAG TGATGGATTCACAACTGGAGCACAAGATGTAGGTGACATTGTCACTTACA ATGAGCCTAAAATTGAGCAAAACGATTTCGTAAAACAGGTACAATCAGGA GAATTCGATCAAAATGGCaaagtaaaatttgaatttgaatcagAAGTTAA AACATGGAGTGATTATATGACGTATGAGTTGGATAACCACTCCATACAAC TTTTATCAGAGAACTATAATGATGGggatgatttcaaattttttggtaaG GGACAAGATGAgtataaaaatattgaagatgACTTTGAGGATTACCTTCA TTACTGGGCTGAAGAATGTGATTATTTAGAAGGATTTCAGGTAAGGTTTC ACATATTTATCTTAAAATGGAAatcttaaattgattttgaaagaaGACTA GAATGCTGAAAGCATAGACTATTTGGTTATGAATCCTTTTCTCGCCAACA CTTGTAACAAAGATATTATAAAGATGCATCTTGAGTCTCTTCGAAATCCA AAGTTTGTCAAAGTTTGTCAAGAATAACATTGTGAtgttaaaagtcaaat ttcaaagaaaaaaaaatgaaatttaattttaaagggCCTCCAAATTCATC TGTTTTTGAGTAACTTTCTTGTTATTCTGGTTATTAATTCTTCTGTCATT TTCTAAATTCTGTATCAATATTATGTTCAAGATCATTCAAAAAGTAAAgt ctgaattgaaattgaaccAGATCATGGTTTTGGTGTCTTTCATCAAGGAT TTTTCgtttctctttctttttttaatgtGTATTCGACATCTATTTCTGTA CTTTGTTAATAGCTTATGAGTGACCTCCATAACGGTTACACTGGTTTACA ATCTAAAGTATTGGAATATCTTGCGGACGATTACAACAAGAAAAGTAGAC TCAGTTTTATGAACTGGTCAACCAGCACCACCTCTAAAGATGAAAAAGAC GATTTTGACGTCATTTACCAATACCTGAATGTGGCTTTATCACTTCAAAC AATGAAGAATTATAATTCATTGTCAGTGTTTCAAGGAATGCAATCAGATT ATTTTAAAAGCTGTGATGGTGGAATACAAATCCCGTATGTGGAATACCAG GTAGCTTTTTTATGTGAAATTATGATAAATCCACAGTCGCAATGAATCAT ATATCAGGTATCAGGGTTGATCGCATTCCAATAGCAGGTTAAGGCCTATA AGTCTAAACTTTCCTTTTTTATGCAGAGTTTCGAAAGTGTTGAATAGAAC TTTTCAGTCAGACAAAAGATTACCATAAGTCAAAAATGCTTACTTTCAAG AGGCAAAGTTAGTTTCTAATCAGTCTTGATGCAAATTTAATCAGATATTA TCGATCAGTTAATTAACTTCAGTAAGTTCAGGTAATTATAAGACAATTTA TTAATCTAATACCACGATAGTGTCTATGTTGCTGCATTGATTGTTGATTA AACCTGGGTGATTTTGCATTTGAAAACGATTTAAAACCTTTTCTATAATA AATTTATTTGGTATTTGTATCTTGATTGAGTTTGAGGAACTATGTCTATA CACAGAGTTGTTATGTTATTTATCAGGCCGAGTCTATTATTCAGAAAAGA AGTGACGTGTTTTTGATAgagagaaaatcagacttttcactaaaagaaca ccccccttctcacagacccactggcaATCCTTCCCACggtaaaattgtcc aaaatatcatccccggtggaaaataattatcaatttttgtccccactgat aataaccaaataaaccaatcctcactgcaaaatattatgctattttccca tCCCCGCTGACTTTtctagtttgaaaataaaataattgaaTCCCCAGCCA TAACGAGTTTCAGTCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG GATTTTTCgtttctctttctttttttaatgtGTATTCGACATCTATTTCT GTACTTTGTTAATAGCTTATGAGTGACCTCCATAACGGTTACACTGGTTT ACAATCTAAAGTATTGGAATATCTTGCGGACGATTACAACAAGAAAAGTA GACTCAGTTTTATGAACTGGTCAACCAGCACCACCTCCAAAGATGAAAAA GACGATTTTGACGTCATTTACCAATACCTGAATGTGGCTTTATCACTTCA AACAATGAAGAATTATAATTCATTGTCAGTGTTTCAAGGAATGCAATCAG ATTATTTTAAAAGCTGTGATGGTGGAATACAAATCCCGTATGTGGAATAC CAGGTAGCTTTTTTATGTGAAATTATGATAAATCCACAGTCGCAATGAAT CATGGGGTATCAGGGTTGATCGCATTCCAATAGCAGGTTAAGGCCTATAA GtctaaacttttcttttttatccaGAGTTTTGAAAGTGTTGAATAGAACT TTTCAGTCAGACAAAAGATTACCATAAGTCAAAAATGCTTACTTTTAAGA GGCAAAGTTAGTTTCTAATCAGTCTTGATGCAAATTTAATCAGATATTAT CGATCAGTTAATTAACTTCAGTAAGTTCAGGTAGTTATAAGACAATTTAT TAATCTAATACCACGATAGTGTCTATGTTGCTGCATTGATTGTTGATAGT CCTAGTGATTTAAACCTGGGTGATTCGGATTTGAAAACGATTTAAAACCT TTTCTATAATAAATTTATTTGGTATTTGTATCTTGATTGAGTTTGAGGAA CTATGTTTACACACAGAGTTGTTATGTTATTTATCAGGCCAAGTCTATTA TTCAGAAAAGAAGTGACGTGTTTTTGCTAgagagaaaatcagacttttca ctaaaagaacacccccttctcatagacccactgggaatccttcccactga aaaattgtccaaaatatcatccccggtggaaaataattatcaatttttgt ccccactgataataaccaaataaaccaatcctaaCTGCAAAAattatgct attttcccatCCCCGCTGACTTTtctagtttgaaaataaaagaattgaat CCCCAGCCATAACGAGTTTCAGTcaattatttttatccccaaaaaatcct actgggtctgtgagaagagggtgtaaaAGAGTTACCATGATATAATTTTT ATCGACTTTAGAATGACTTGGCATACCATACCAGTGCTATACTTGCAGCA GCTCTAGACAGCACTACCATTCCACTCTACCAAACCCAGGGAACAATGAC TATGTCTGAGTTATGCCACCACGTTTCACATGGAAAATGGAAACTGGCTG GTACATCATTCGGTCTGCCTCTACAAGGTAGTCTCAGTGATGGCAACACT CTATTTGATACCATGTTATCAGCTAAAGGATTCTACAACGGAATGTCAAC TTGCTTATTCCCGAATCTGAAAGATGTTGCTTTGAAACCGAATTCTCAAC TCGTTGTTCTTCAGAATTTATCATCAGATTTGGTATGTCCTGATCAAATT GATAGCAAGATTCTCCAAGGGCTTGGATTGAATCGTAACGTTTTTAACAG GCACCCAATGTCAGTTTTGGAGTATTTTAGTGAGAGATTCTACCCGTGTA AAACAACATTGACCAAATTGTATTACAGCACTGACAAATTGAGACAAGAT CAACCTTTCCCTGATTTGATCAAAGGTGAAAAAAATCCAACTACGTTTTC TTCGCTGTACACATCACCatgtttttatgattttttacatggAATCGTGA TGGCTTTGAGGAGAATGAATTTACACAAAGTTCACGCTATACAAGAGTTT GGCTTGGATCGGGACATTATTACTGAGCTCACTGAAGATTTAGTACAGAT TGCTCAAACGTATAATTATGAGAAAGCATTCCATGAACTGGAAGaatgaa aatcattttttgtgaaatcagCAATCTTTAGTTCTTCCTTGGTGGGATGA TCTACTTAATTATACGTATTATTACATACTTAATTATTAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024585TCONS_00024585Clytia hemisphaericatranscript
TCONS_00024586TCONS_00024586Clytia hemisphaericatranscript
TCONS_00024587TCONS_00024587Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024587-proteinTCONS_00024587-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000504supercontigsc0000504:95471..101410 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MSTO1protein misato homolog 1 isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.23 9.57 5.81 4.91 9.46 6.83 8.27 7.96 5.57 5.58 5.26 3.43 3.68 3.29 5.18 5.58 6.57 5.58 2.02 2.61 5.05 5.04 16.02 15.01 6.03 7.12 2.05 2.06 7.94 9.55