XLOC_013959 (gene) - C. hemisphaerica

Overview
NameXLOC_013959
Unique NameXLOC_013959
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000511:214154..221455-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013959 ID=XLOC_013959|Name=XLOC_013959|organism=Clytia hemisphaerica|type=gene|length=7302bp|location=Sequence derived from alignment at sc0000511:214154..221455- (Clytia hemisphaerica)
GCATCATATGGCGGGTTAAAACTGCACGCCCGCTCCCACTCGTCCCAGTC
CTACGGACTCCGACTTGTAGCGTTTGAGTTCGGTCATTCAGTTCACTTCA
TCCTCTCATTCAGTCAACACAAATATTTTGCTTTCTTGGTTAATCAGAAA
TACATTGCTCTCATCTTCAACTTCCAACACGACGACGTCAACTGCATCTT
CAATTATCAATTCTGCGTTTCTCCTATCGAACCCCACACACCAACACTCA
AAAAGTATGTCCACCACCGTGTCCCACCGTTGTTCCAGTTACGACCTCAT
CCGACATCCTGTTGAGTCAGCATTATTACGATCCAAAATGGTATCTCTAA
CTGTGGTATTCCTTTTTCATCACAACGTCTGGACCTGAACGACTGTAAAA
TTTATATCTAACTCCACCCAAGATTATCCAGCAAATCCGCCTGGGTGAGC
CTGTTGTTTTTTATTATTTTACTGCCTGCACACTTCGGGAAGGCCCATTC
GTCGCCAGATTCGTTAATTTTCGATGGGGACATCAACTAATTGCCATAAA
GACATTGCGATTCCAGCATTTCTCTCCCCAATTCCAACTTGGCCTTGAGA
ATTACATGTCCCCTCCCCTTGATGATGGGGTGTCCTTTCTCCTGAACCTC
TATTAGGTCTCCGCCACACTTAGCCAACAAAATGTCCGATTATTACCAGA
TATTCTCGATTTTCTCATTTGTATACGTAGCATGGGGGCAAGGCACAGTA
TAAGACAAGGCATGTCATTTAGGAGAACGTACATTTGGACTGGTTTAGTT
AAAGTACCCCTCTTGTATTTGGTCCCCAAATCCTCCCCTCTCTGACAATG
GTGTGTCATACATCTCTTAAAATTCAATCAAGTCTCCCCCATCATACTGA
GCAGCCAACGAAATGCCTGATTATTATTAGATTTTTTGCCTTTCTCCTTC
TTGTACACGTCCAAAGCACATTATAACACTAGGCGTGTCATTCTAAAAGG
GCGTACATCGGGCTGGTTTTATTTGACTTTCGTCCTTGTAATATGGTCCT
CACATATCAACCCACTTAGTAGCTGTATCTCCATTTAGCGGTTTTTGTTT
ATCTTTCTGTTTGTCAACCTGAATTGTTCCCCTGCCGGAGGTTACTTAGA
ACTATCGTAGATCTCTCCTCTGACACTGTCAGTGTTTTCATACTTTTGGG
TGGGTTATCTCATGTGTAAGTCCAATTTCATGTTCCACCCTCATCTGAGT
TGCATCTAACCTAATGATTGGTCCTTATTTGGGTATTCCCGACAGGATTA
GCAAGTCAATGTCCTGCACTTTAAATAGGTTCCTCATTGTGCCTTCAAAT
CCTTTTCTTGGCCAATTGTATATGGAGTTGATTTGCTTTGTGCTTCCCTT
TCTTTAACTATACAGAATTTCACTTTCAGAAGCTTTATCCCTCCTGCAAT
AGCTCTTCAAACCCAATCACTATGTCAACCATCCCATCTAGCGTTTGTTT
GGACCTTAGCATGTCTGGATTCTTGCTCCTTAGAACTATGACTCATTTCT
TCCTGATCTTTCAGTGCCTACTGACTTAATTTCTCTTTCCTTTGATGCTC
TTGAGGTTTAGGTGTCTTGCAGAAGGTCAATGGGCCCTTCTCCAGTAGGT
CCTTTGACTAAGCTGATCTTACTCACACTCCAGCATTCGAAGCTTTTGCT
GTTTACGCTTTTCTTAAAGCTGTCTTGAGTCAACATGAACAGATAATCCA
CTACAAATAGTTTTGTGTCAATTTTCTTTAATTAGGTCTGTGGTCTTCCC
AAGGCTCCCATTCGGCTACTCTTCTTTCTCTCTTACCTTTCGTTCTCACC
TTTTCCTTTGCTACATGTGCTCAGCTCTGATGACGTGTTTACTAGACCTT
TCTTTTTTTCAGCTTCAGCTACCCGCATTCAATTTGACTCTCCCAACTCG
AACCATCATGCTGCCCCCATCAATTGTTCCTGTGTAGTTGATCTTATGTG
TTCTTCCTTTAGGTTTACCTCTAATTCCACCTTCCTGAACTTGCTCTTTA
CTCTCTGTTCAAATAAATAACACGTTCCTTCTTCCTGGTCTGTCGCTCTC
GTCGGGTCTTTGATGGTATTCCACTGCACTTTGCCAATTATACAACTTTT
GTCGAGTTCCTGCACCTTCGTATATACTGGATGATATTCAATTTCAATCA
TCAGTGCTGCGGGCAGCAGCTGGTTGCAGACAACTACTGGTCATTCTGCA
ACGCTTAGTTTTTCACCTGTAAGGTTAAAATTTTAGGGTCATAGGCGTGT
TGGTTTCTCCCCAAACTTCTTTAACTAGCCATAGCTTTCACTAACTGCCA
CCCGCTAATTAATACAATAATGCTTGTAAAAACTAATTAATGCTAATTAA
GACTTTTTAATGCTTTATAGCAAAAGTCTGGAAATGATTTGGAATAGTTA
GAATGATTCTTCTCAGCATTTTCTTTGAGATATCAATGAATAAGCTAACA
TAAATGAAACATATTTTTTTCTAAAAATGTGAATTACCTGAAAGGAAGAA
ATTTTGGCGGGAATTTAATTTGGCGGAAGGCCGAAAAAGTTTTTTAGATA
GATTTAATTTGGCGGATGGACGAAAAAACTAAATTTGGCGGGAATTTAAT
TTGGCGTTTGCTGAAAATTTTATCCTTAAAATGGTGTAGAAACAGCAAAA
AAAATGCAAAAACACCTTAAAAGAGATCATATTTTCAAAAAGTTTAATTT
GCTGGCGGGAATTTAATTTGGCGGATGGCGGAAAAAAATTTTTGGCGGGA
ACTTAATTTGGCGGATTCTGGCCAAATCCGCCAAATCCGCCAAATTTTCT
TTCCGCCAATATTTCTTCCTTTAAGGTACTTTTTACAAAGAATAAACTAC
GAATCTTAAAACATTCATTAGGAAAAGTGTCCAGGTAGAATCAATTACAG
ACAGTTACAGATACTAAACCAGTCAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAT
ACCAGTAATCTAGAAGCTGTAACAGCGTTGTGTAAAGGATGGAAGATGAT
AGGAAGTAACGTGGTAATAGTATCAGTAACGAGGCAATATTGATGAGCAG
GAAGCAGGTATTAACAGGAAATAGCGTACATTCAGGACTTTTTCCAACGG
CATCATATGGGATCTCATGGACAAAATTGTTTATATTAAAAAGATATGCC
AGTTATCTAGCAGTTGTAACAGCAATATCGTGTAGAAGGATGGGAAATCA
TGACGTAACGTGGTAATAGTAGCAGTAACGAGGTAATATTGCGTTGTCAA
GGTAAACGAATCCTCATTCATAAAAAGCTTAAAGGGAAAATAAGAAACAT
GAAATTAGATGATATATGAATATATACTGAAATTTCCTCAAAAATAGTTC
ACCAAAAGTTTCTTTCAATCTTTGATAATAATTTCCCAAATAGTGCCTGG
TGAGTATCAAAAAGAACACAGGTTAAATATAAAAGATTAATAAAACCAAG
TCTAAAAGTACAGAAAGAAAAAAATATTTGTATATACTTATACTGTCGAA
GTACCATAACACAGCACAGGATCTTAAAGCACTCTTGTTGGTTGGGAGTA
GAGTATGTTGAATGTCGATTGTCGAATAAATTTAGTTACAGTGGAATTTC
GTTGCCAATTCAACCACCAGCAATAATTTTCAATATTTAATCATTGTTCT
ACTATTATTATTTTAATCATTGTTCATTATTATTGCATTGGGGACAAACT
GTTTGGGTCGAAAAATGAATCAATCTCCTGAATGTCTAAGACAGGAGACA
GATTGTAATTTGACTGTCAGCAAATTCACTGATTGGTATATGTATATATC
TTGTTGGTTTAATCCGAAAGTCAAAAGTAAATGCGTATACTGGTATAAGT
ATTTTGACTGGAATTCCATTTTGACTGCAGGAGGAGAGAGCTTGAATTTA
AAAAAACTTCCAGAAACTTCTCCATTCGATTTCCTGCATGTTGACCAATC
GGGCAAAATTCTACAAGCGGAATAGAATCTAGTGTCGAAAGCTAAGTAAA
ATGCCCGCGGCGCCTGCTATTATAAAGAAAAAGTTTTTAGGCTAGCAGCT
GCCGTCCCGGAAAAAAAACTGAACATTTACGGAAGAGACTCATTACGGGT
AGGCTTGCGCGACAAAACAAAACAAAACAAAACGCGCAAGAATTCGAGAT
TCCAGTCCAATATCTATGCGTGAAACTATAAGTGCCTCCTCGTCGCTGCG
CTCCTGCGGGGGCAATGATTTAATTCACTTCAGTTGTTCCTTTTTATTTG
TCTTATTTATTCGTTTACTTAGTTATTTTTTTTCTTTCAAAATAGGTGTT
AAGCTAATCTAATCAGTTCAGCTTGGGAAGGGGGCCCTATCCCTCGAATT
CTCCTCTCCAATAATTCTCCTTCCAACCAACAGAAATTTCCTCATTCGGG
GCAATGGTCATGGTCTGCATGATTAATGTTCGCAAACTGTCCCTTCTGCA
AGCGAGCCCCCATTCGACTACCCAGCTACCTGTGCTTTTTAATGCGAGTT
ATCTGCATCTCACCCCTGGTTACAATCACCCCTTTTTTCTTCAGTGCCCA
AAGGAAGATTCTGATTTTCAGCCGTCATCGGCAGCAGCAGAGCTTCAATA
GGTGGAGGCACCACCTTCTTAGCAATTTTGGTGTTACCTCTGAGTCCATT
TAAACCCCTTTCACAGACTGGACGGCATTATTAAGTGGCCAAGCGGTTCA
TGGTAGTCCTCAATGTTAACCTTTTGATTTTAGCCAGACTGTTTTTCCCA
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATT
TCACAATTATACATTTGTCTCCCTTTCATTGCTTCCCCTTGTTTATGTTT
AGGGTATCTTATCACTATTTTCGGGTATTTCGACCATCATCAAAAACGCA
TTTTTGGATTCCTCACTAGGCTAGGTTTATGATACTCTTCACTCAACAGT
CACACTGATAAGGAATTAATTAGAGCTAAAAGTTAGCTCATGTTAATTCC
GCAATCAGCAAATCATACACCCGGCATCATATGGCGGGTTAAAACTGCAC
GCCCGCTCCCACTCGTCCCAGTCCCACGGACTCCGACTTGTAGCGTTTGA
GTTCGGTCATTCAGTTCACTTCATCCTCTCATTCAGTCAACACAAATATT
TTGCTTCCCACCCTCCCTGATACCCTTATTTAATCATATGCGCCTTTTAC
TTGTACCTATTTCCTTTCGCTGTTTCTTTTCTCTTCTATTTTTCAGATCA
ACCATCACCGACGACGGGAAGAGGACGCGCGCACCAAGTCATTTCGATCA
ATCCTAGTCCCAGCGGTTTTTCCTGGTTTTTCCACGCTACAGGTTTTTTA
GCCCAGGGATTAGGTCGTTTGGGATGCATCTTGAGCTCGATCAATAGGTG
TTTGTTAGTTTGCTCGTTTTGTTTTTTCTTTTATTGTTTTTCCTTTTTGG
GTCGTTTTCTTTTTTTTCCTTCCTTTTTTTTTTCCTCTTTTCTCATCGCT
CCGTTACTCTCATAACAACGTCACACGGGAGGCTCCGGCTCTCGTTATAG
GCTTAGGTTTTATTTTTTTTTCAACTTTTTCTTGATTTCCAACGTCACGG
CCTCCGGCTCTCGTTGTAGGCTTTTGTTCTTTTTTTCTTTTACTCCTTTC
AACAACGTCACACGGGAGGCTCACACGGGAGGCTCCGGCTCTCGTTATAG
GCTAAGGTTTCCATTTTATTTATTTGATTACGTCTCTTAGAACAGCGTGG
AGACTCCGGCTCTCGTTGTACTCTTTGGGGTTAAACAACATCACGGCTCC
AGCTCTCGTTATAGGCTAAGGTTTCTCGTTTTTTTTTATCTTTTTTTCTT
TGATTACTCCTCTTAGAACAGCGTGGAGACTCCGGCTCTCGTTGCACTCT
TTGGGGTTAAACAACATCACGGCTCCGCCTCTTGTTGTAAGGCTTAAGTT
TTTTACTAGAACTAGAACCTTTAGTACTTACCATAAGGGCTAGAATTCTT
TAGTACTTACAGTTTAAGGGCTAGAACATTTTAGTACTTACAGTTTAAGG
GCTAGAACCTTTTAGTATTTACAGCTTAAGGGGGGGTGCGGGTTACTACG
TAAACCCCATCTAGTTCTATACATCAGATCAGATAGGCTCAGATCCACGG
GAGGCTCCGGCTCTCGCTGCGATCTTCACAACCGTCCGCGGTTATATCAG
ATAGGCTCAGATCCACGGGAGGCTCCGGCTCTCGCTGCGGTCTTCACAAC
CGTCCGCGGTTATAGGCTTTAAGTAGATTTATCTCTCGATGCATCCCCAA
ATGTCACGCCAAAACCAACACACTTTCTTACGTTTCATTTTATAGTCAAA
ATATCTCATTTCACAATTATACATTTGTCTCCCGTTCATTGCTTCCCCTT
GTTTATGTTTGGGGTATCTTATCACTATTTTCGGGTATTTCGACCATCAT
CAAAAACGCAGTTTTGGATTCCTCACTAGGCTAGGTTTATGATACTCTTC
ACTCAACAGTCACACTGATAAGGAATTAACAGGCAACTTTGTTGTCATCC
CCAGACCTTTTAGACGAACGCGGTCCTTACGATTTTGAGATAGAATATTC
GTCAGATTGTATGTTTTCACCCATCCCTTTAGAGCTTCAGCGTGGTGGGC
AG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024836TCONS_00024836Clytia hemisphaericatranscript
TCONS_00024835TCONS_00024835Clytia hemisphaericatranscript
TCONS_00024834TCONS_00024834Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024835-proteinTCONS_00024835-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000511supercontigsc0000511:214154..221455 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.81	7.23	4.67	4.27	7.3	5.65	12.38	16	12.64	24.82	16.53	8.4	12.65	15.21	17.44	21.92	20.41	16.06	5.55	8.47	14.52	18.5	9.68	8.22	9.8	11.96	19.06	16.23	14.63	10.73