XLOC_014108 (gene) - C. hemisphaerica

Overview
NameXLOC_014108
Unique NameXLOC_014108
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000521:8119..11677+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014108 ID=XLOC_014108|Name=XLOC_014108|organism=Clytia hemisphaerica|type=gene|length=3559bp|location=Sequence derived from alignment at sc0000521:8119..11677+ (Clytia hemisphaerica)
ATCAACAACAAAAGAGTACAAAATAATTCACTTTTATAAAAAGACAATCT
CATGGGACATCAAAATCTTATCGATTCGATGGCAGTAAAACTataaattc
aaaatgttttgaagTTCAAAATCACACATTTCAACTCACAAGAGTTAAAC
AAGAGTGGAAGAGTAGTGTCAAAATCGTGGTTAGAAACATATTAAGAAAC
CGATAACTTCTAATATGTCGAACTCGAGGTAAGAAcattatatttgaaat
aaaatcaattCAGTGAGAATAATACTAATATTATCTATATTGGGAAATTA
TCAATCATTGTCTAATGTAGGCTACAAGCTTTAATGTATTTTTAAGCTTT
TGAGTTTCGAagaaaaatctggaaaatgtttctagattttcaaaactact
gcgcttTAAAGCGTCAAAAACTACACGGGCTTACAATCTAAACGTGcaaa
ataagacaatttttcGTCTATATTTCCTTTAGAAACATCAATGTTTTATG
GTTGGCAACCATTTGTATCTTGTATTTCTCAGTTATCGTTAAAGCCGAAT
CAAGTAAGTTTGTTTCCATAAATTAATGGGTAAAGAAATAAGATGTATAT
TTGTCCAAATTCGGGTTTTGAGTTTGTAATGccttaaaatcttcttaact
tgttcttaatattttgagccatcgaagcctcgtgttcttatgtagtttgt
ttaCGTGAAGTGCTGCTTTAAGGCTCCTTcggatttcttgaattttggGA
CTTTTAACTTTTGTAATAAACATTGTCTTTCATTAATAGATTTCACAATA
GAATGTGACACACAAAAGATGACAATTTACATTCTGAAAGACACAATTTC
AGTCCCTGAAAGTGATCTTTCTCAATACAACATATCATGGAATGATCCTA
CTTGTGGACCAAGTGACAAATCCAATGaaacatatttaattttggAGGCT
GGTTATTCTTCATGTGGAACTCGGGCTATTGACGCTGGAAATGACGTCAC
ATTCAAAAATCAGGTAAAGTTTCCTCCACGGTCTTTTCAACCCAACATGC
AACTTTACGCGCGAAGACATTGCAAGGCTTCATGAATTGAGAAAAGTTTT
GCTTTGGATAAATATCCGAGGATATTCTTTAGGGCCTTTAGGGAAAGGTT
TTGCCAGATGCACTAGATTCTCTTGAGCACGCTCAAATTAAACATTGTTT
TAGCATATTAGGTGTGGATAGGGTCTAGGTGAATCTTAAACCTTTTTCCG
GgcaagaaaattaattcctCAAGCTTTTCCAAACTTAGGTTATGAAATGA
GAGCTTCAAATCACACCAAGAGAGATTGATTGGTAACCTGTACTgtacaa
tagaatttttgaacattttctaaataataaatgtCGCTATATGGGAATAG
TGTAATGAACTTGCATTCAATATTCAGGTCTCGGTCAACTTAAATACTAC
AAACGCATACAAAAACGATCTATTGGAAAGGATCGATACATTTGCTACAT
ATTCCGTTGAATGCAATATCCCACAAGGTGTGAATGTAACACACGAACAT
GGAGCCAATATCACCAAAACTGATTTGGTGGAAGGTGTATCGAGTAAGCA
GACATTTGAGAAGTTGATTTTAGTGAATTTGAGACCGACGGGGGGGGGCT
AGGTTTGTGAGGTGAAGGGTATGCCTGaaccaaaaaattgacaatcgacc
ctttgagagaagaATAATTTTTGAGACACTTTGAGagaatttgtcatttt
tgtgaaaatttcaggTGAAGTTTTCCCaaaattcaattaaaattttcgaa
aatttggaCCCTTTCAGAAAGAAAAACCCATTCTTCCTCATTACATTTAA
GATGTGTTTTCAATTCGAGGAAAATCCATAATTACTGATCTTGGAAGACG
ATACAATTTTACTTGAAATTAAGGTTTAAATTCATTGAATCAAATGTTTT
GGGTCCCTTCCAAGTAATATtaaaatcacttttatcaatCTAATTTTAGG
TTCGACTGACCAATTCACTGTCTCGATGAATCTTCATGAAAACACAAAAT
TCAATGAAACTTTGAAATATCCTGCAGTCATTGATAGATTGGGACGTTTT
AATTTGGAAATAGAAATTGACACTGTTGCTGACCTGTTTATTATTCCACG
AAACTGCCATGGTACTTCAACTTCAAGTCGAGATGATGTCATTCGGGAAG
CTCTTGTTACTGACGGGTAATTAAACAATTTCATTTGCCATAGGTATTTT
CCGTCTACTTTTAAGATATTTACGTCAAGTCTCTTTTACGAAACAAATCG
GTTTACTTTCACACCCCctatctcacagacccggtaggattttttcgttc
agtggggatagaaataacagactgaaactcgatgtgGATTGATTCTTTTG
ATCTTCTATTGACCTAAATTCTTTTCTTTCCAGTCAGAAAGTTagagtgg
gaagggttcccagtggatCAGTGAGAAGGGGTGCTCTTATAAACCTTATG
TTCTCTAAACTCTTTTCAAATACAACTGCCAAGAAGTCATAAGATTCATT
CTTTTTGTCCACCAAAGCAAGGTTCAACAAGTAACTACAGCTAACATCTA
TTTGATCTTTTTTGATTGGAGAAAATAATATTTACAAGTAAATATATCTT
TTGAACGTCAATTTTGTCTAATTTTAAGCAACCTCTTCTACTAAactatt
tcattgtttttagaTGTCCCAATGCTGaccatgttttcaaaaaagaaact
gCAGCTGATAATGGAAAGAAATTCAGATTTTCATTGAACGTGTTTCGATT
CAAAAATTCGAATGGTATGGTCTACATTCATTGCTCAGCTCACGTCTGCT
TGGAAGGAAGTAACGCCACAAAATGTCAATTCGGTTGTGATGTGAATAGC
AGACGACGAAGACGTTCAGTGGAAGATAATGCTTTGATGCCAGTTGATGC
TGATTTATCCAAAGATTATGACATTCGAACTGGACTAATTATTGTAACAG
AAAACTCTCAAAGTAAGTTTGAATGCGTTGAAACTAACAACAAGGGAAAT
CttaaatctttttaaagtttgggatttataaatctttatttATACCCCTG
CCTCACCGGATATTGTTTTGGAATGCAAGTCAATTTCCTATCTTGGccga
aattgtagggtattcttTCAATTGAGTGGGATCTGACCGCATCTGTGACA
CCACGGTGTTTGTTGTTTACACTTCAACAAAATTCCAATAGAGATTGACT
GATATTACAGTCAATCTCAGTGGAAGCAAGTGTTCAATGTAACTTTTAAA
ATCCACGAAACTTTGGGGTATTTTTCTTTGTGACAGTAAAATCTACCATG
TTTGTTTGACTTTGTTAGTATTTCTTTTTCTTAGATAATGTCCCAGCTGG
AAACGATAGCCAAGCATCAtccaaaaatgataaattcTTTCAAACCACGA
GCAATATCATTCTTATTGCAATCGTCTTGGTGATGTTGACTTTCATTTGC
TCTCTTTTGGCTTTTGTTGGTGTACGCCGTCATCGAAGTGGTTCGAGAAA
GAATGtgga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025088TCONS_00025088Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025088-proteinTCONS_00025088-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000521supercontigsc0000521:8119..11677 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1635.18	1651.16	1703.47	1295.81	1.03	0.65	0.31	0.55	0.45	1.86	0.48	0.09	0.09	0.1	0.02	0.02	0	0	0.19	0.15	1.23	0.61	324.63	245.63	0.16	0.77	12.24	16.95	146.4	164.8