XLOC_014341 (gene) - C. hemisphaerica

Overview
NameXLOC_014341
Unique NameXLOC_014341
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000539:51602..59458+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014341 ID=XLOC_014341|Name=XLOC_014341|organism=Clytia hemisphaerica|type=gene|length=7857bp|location=Sequence derived from alignment at sc0000539:51602..59458+ (Clytia hemisphaerica)
CtcaaacttgttgtcaaaggCTTAAGATTCAGAGAAAGTTTGTATGTTTG
ACGTTCGAAAGCTCAACATCGACGTCTTCTCCTCCTGCTCCACCAAACAA
GTTGACATTGTGTATTTGACGGCCTTGTGGGTTTGGGATAGAAGATATCT
CAACTCCGTTAACAATAAAAGTGTAACGGTATNGGTTTGGGATGGAAGAT
ATCTCAACTCCGTTAACAATAAAAGTGTAACGGTATTCTCCGTTTGCTAC
ATAGCGGTGATCGATTTCAAAAGAGTAGGTTTGATTCAAATTAACAGTAA
AAATTACGATTTTTTCACTTGGTCCCGAATTATAACTATAAATCGAGATT
TCTTTATCCGTATGGAGATATATTGTTGGCACACGACTTCCAAAAAAGCG
ATAAGCTGCTCCAGTTGTTGCCACTAAAAGTGCTAACCGACTATTTGGGT
ATTCTCTACAGATGAAATCGAAAGATAATGACCATTCTGTGGACAACCGA
CCAATGTTCCCTATTAATCCAACCTCACTTGGCTTGAACGCTTAAAtgga
aattgaaatattcgtgTCAAATAAAGAAGAATGCAAAGCTTCTAGACTGC
AATTCAAGGAAATAAATGTTGTTTCAGAAATGCATTTTCATGGTAATTTT
GCTCGCAAAGTGATAAAAAGTCGCAtgttgggatagagataggctaCAAC
GCAAACcagatttttttagaaaatcgggaaactttttgggaaaaatcggg
aaaatttgTTCATAATCGGTGGAAAATTTCACGTATTTATACTAAAAACA
Gtacagattcacgcattcacacaattaaaaaagtggattttcacgttcat
ttaattaagttttttttttcaattcacgcatgcGTGCAACCAAAAAAGCT
CATTCAGCCAACCACTGGGAGGAACCCATTCAAAACTGCTGCAGGTAATA
AAGTGAACAAAAAGTCTTTTAAAGGTTGCGCATGTAAGGACATAGAAGAT
GCTAGCGTTCGTTACAGTCATAGTTAAGGTGGGAAAATATTGCAGTCTGA
CGTTATGGTGGTATACAGAGAAAGAATCGGCGGGAGGGTTTCAAAGAAAC
AGACTGGCAAACtggactggcaaactctaccgactgtaaactctttttgg
caaaaaaaaccgtttgcaagttttcttcggctttgggttTATTCCTTAgg
tagtgatttgtcttagcaTTTTCCAGTAAGAGCACCTCTCTCTTATAGAT
ATTTTCATAGATTACGTCAAGAGCAACGGTTATCTtgatttcgaaatatt
tcatACTGTAGGAAACGATTCTGAGTGGAGTTCATGAATGAAGTAACATT
TAAAGACTTGAGGCATTTGATCACCTTGGTAACGGTTTCAAAAAgaggca
gtcgttgcactcaaaattATATATGAAGGTTCCAATTTGAAGCATATTTC
AAGCCAACCATAATCAATCAATTGTGGTACAAAGTTTGAATATAATTTTG
TTCTTACTACTTTTTGGCAGTAGTTCTTTGTTCTTACCTTCAAGTCTGGT
GATTTGAGGCTCAATGCCATGGTTATTTGGAGGAATGCCCAAAATCTAAG
AAAAAGCATATCAAAAGTGCATGAAATTGcacgactaaaatttgggcagA
CTGGGGAGACATATAttataacgtttttattttggaggtcctataaaaaa
taaatatctttattaaAAATTAGGCAAGAGAAACGAGTacgaaaattttg
gggtattttctcTCTATTTACCCGAAAATTGCGACATATAAAATGGAAAA
GATTTAACGGCTTTTCCTCTGTGTTGTTTTGGGAATagaatatttttctg
aaaagaaaataataatgtGCAACCATCTCTTTTTAtccaaaaattatata
aatagTTTTATGGCTATTCATCGTTTTATCAAAAGTTTACATTAATCCTG
TTAGCTTAAGCAGTCAGTGGAAAACACTCCCATTGTCTGGAGTGGGTGAG
TGAGTGTGCTGGTTAATGTATTTGGCTTTCTCAAAATGGGAAAAAGGCTA
CTGAAGCGGCggctagaaataatgatgttTTTTATTGGATAGTTTCTCAT
AAAAAGAATTGGTAGGGCCTGGAAACGAGGTTGACTATACAGGGTGTCCA
GAAAAAAAGTACGGTGTTGAAaaatgattctgagtagaaggttgttgcgt
ttgtttaacaaaatgtaagaaaatatataacaatacaaaaattgttttta
caacagtcatgattaaaaatatttaactttctttcgattttcatgacgtt
aaagttaaATAATATATTTCCTTGACAAGTTAAAAATTGTACATAACTCC
GAGTTTCATGCTCTCCTAgcaacccgggggggggggggNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNccccccccccccgggcctagCAATCGTCAGATgtgaat
aaaatcaaaacattaaagatattgagaattttttttgtaaaagttattca
taaaagatgacAATAAATCATGACAATAAATATGACACAgagataaacat
tgcaaatttagtgaaacacacacaagaactttatttctatagaagtggta
ttATTTTTCCGGACGACCCTGTACTAATCATGGACAACGTTTGTtcatgt
tcacaacgtccaagtagcgttagatgaacgtcgatACAACGTTGTGTACA
AGTTTGGATTATCCTTCCTCACCTTACATTCAGCATTTGCTTGACAGGAA
AAAACTACAATAATTGCAAGTGTACAAATTTTGATCATGATGAAAATTAG
ATCAAGAAAgaagttttcaaaatcaaaataacaattttcCGTTTTTACTA
Taaattggaattttttaacgattattcattttaaaatttttcaatttttt
gatgacaatGTCATGATAACTTTAATATATTATTACATACTTTTAGTCAT
CACCAAAAGACAATTTTTGCTCAGTCGTGCCGAGTTTTAAAATAAGCTCC
TTCAGGGAACGGAGCGTCAGTTTGATTCACAAGTTCCTtcccattgactt
ccaagcccgaagggctagactcaaGACTCCAGGATGGGAAATGACCCTAC
TTTATTCCCATCCTGAGCGCTCGTGCGTGGcttttacacaaacgctggat
tgcgaaactaaaatctatcgccagatttaaaaaatgtacaATCAcagtcg
taatatttgagaaaaaagggaaatccctACGAAATCTTTTAACCACAAAC
agtttggaagcgctctaaattaggttggaagagTAGAGTTTTCACTCTGA
GTTTTAGCGCTTAGGAGCTTACGATCTACGGATCCAAAAGTTCGAGAATG
ATCCAATAGGGTTCAAAATATAGCCTAGTAGTCTAAAAACCCCTCTCGGA
TTTAAATACTCGagtaaatttatcaattaatcAAAAAGCGAACTCTTGCC
GCgaacttcaaatttcgaaaaacgagcaagtaagctaaattctcaatggA
TTTTGAACATCATGATTGTAGtcctcgaaaacaaaggaaaggaATCTGTC
GTCATGACTACGGCGCGTTTTAGGTTCGTTCTggataggaaataagtggc
gtcactttttcttgcctgggaaaggttagagattctactctagccctttg
ggaTTTAAACTCAATGCTTTCTCCGAGTGAAAGCCTGCTGACGAGGAAAA
AATACCAATAAATTATTCAACTGGAAATTCAGCTACATTGAAACTTATGG
CGATTATTCAATCCGGTTTATTGATttgatacacctttttttataaggat
atccaaaacttttgaagccttcggatgttcttaacttttttagttttaag
acTAAAAATGCTCTCAACATGTTATTATCTTCACTTTTTCgttagttttt
ttctttattttcctacgaaattggctgttttaggGTCTGGAaagacttaa
aatgttcttgataatttgttcttaatatatTTGTCATCGAAGcattatat
tcttatatagttcttgtttttatggaaaaaacTGTGTAGCAGATTTAGTC
TTATGGAGTGATATTTCTTTTATGCTTTGCAAAAGCTATAATCATTTtcg
aatagacgatatcggctttaccgaattctccccgaatgactacccatgat
gcattgcgcaaaaaaattcacggacgataacccaaaccctaacaatgcat
catgggtaatcattcggggagaattcagaaagccgatatcgtctattgag
atttttttcaacTAAATAACAACAACATCAGCATGACACCAGAACTTAAA
GGGACAtcaaagtactgacgaaatttgtaaacaaatcgTATACAGCGGAA
TACAATATCAAtacaaaaaatgtcacatgtcaaaataaaaaataaaaaca
gttatGGCTGATTtagattgtttcaattgttttacaagtttgttttggac
acgtgattttaattgttctcacCCTGATGGACGATGGGCGCTTAGAAGGA
GTAGCAAGTTTTGTTCACACCTTATGTAAATATTATGCTAGTTATATACT
AGTCAATTTTTATTTAGACTGGATTAAAATTCATATTCCAAATTTGTAAG
AAACAAATCAATATTTACAAGATATGTAAAACAGAATATTATGAATGCTA
GATTAAacctagacgatcctatcgtctacacaagatcactaaaaaaggga
atagtttaggagaggcgtgataaattcgggtggagtaagcagtggcggag
gtgtttacagtgcgtttgttccaaactctctgccgtcaattttttccctt
aaaccgccctgacgccctaactctttctcgcatttactttaaacagacga
tagcatcgtctagatTAAACCTAGcgctttttttgttttcttgcaGTTTT
TCGGAAACCCAACGCTAGagacacttcaaaaaagtcatttatcttaaaaa
gataattagttcaagataccttatcggcccttttcacgccggccctaatt
taacgccagTCTTTAttccgccacagcctaattctgggcttacgccaatt
agggccgtaaataacgccaaaacttataaaaatggctacttatgcttcaa
attagtaaataatgactaaaatttacgttaaaatgtcatttttcagtagt
aaactgttgaaaatcccatcgaaaatcactgatttttaaatatatattaa
atatttcactgaagttttaaatatggagtaaaaacaatggataattttcg
tcttcgaatcatacctaaaatcctttaaattgagaaataatgataaagaa
ttaacgccgcttttaggttaaaattgctAAATCTTGGTGTGAGTGGAGAG
AACGAagatgttttgaataatttgactgGTCGAAATATCTCAGCCTTAAT
GGACAAAAATGAACCTAACCTAAGGAAACCAAACAGAAAATGGAGAAcag
aaaatgtaaaatgcaAACACCAATTCTTGAACTTAAACCAACTTAAAATG
taacaaaaccaaaaagaacCGAAATAAAACGACAGTAAATTAAACTTCAG
TAAAACGCACCTCTCACACACAAGACACTCACTCAGGTCTCtcaggtcgt
gttcagacctgaaagtttaagtttaaggtttaagtagtattttgttgata
tgggaattcaattataatcacttttcttttgtcatcatcgatNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNttggtttaactaatgaggagcg
tgccgttgaatacaaaaggaatataaaagaaacatgtagacctaattgct
ttaaaccttggtctgaacacgacctcaGTGTTGAACTAATTGCTATCTAC
AAAATTTACAGTTAATAAACATATCCTAATTTCCCTAGAGGAATTACAAA
TGAATACAAAAGACACTTAAAACAAAAGGGACACTAAACAAAAGAGGACT
CAAGAGACACATGAAGACTAAAAGACTCCACAGGGAATACCAATTAAAAC
ATAGAAACATAAACAGCACGGGCAATTAAATGTTCATTACGATGGAGCAG
TTTTCTCCATCAACACttggcccttttaacgccggcccaTATTACGCCAC
GAgtccaaaaataacgccaataagggcccgtgtaaaaagggccgataagg
tagatcAAACCTTTTCACTCTTTTGATATGGTTCCTGAAAGGACCTCTAA
ACCCCTATCCCCTTGAGCTGAAGCTACGTAAGTTTATTGGCTGCAATGAC
TGGAAAAAATTTAAGCACCATGTTAGAATATTTTGAATACAGTAGAGTTT
CCACAACACACAAGAAACATAGCAATTAAGTCTAGAACAATTAAAGTTTA
GAGCCTAAATAGTGTGCTCAAGCTTGTTGTTCAAAGGCTTGAAATTCAAA
GAAAGTTTGTATGTTTGACGTTCGAAAGCTCGACATCTAAGTCTGGCCCT
CCTGCTCCACCAAACAAGTTGACATTGTGTATTTGACGGCCTGGTGTGTT
TGGGATAGAAGATATCTCAACTCCGTTAACAATAAAAGTGTAACGGTATT
CCCCGTTTGCTACATAGCGGTGATTGATTTCAAATGAGTAGATTTGATTT
AGGTTAACATCATACTTTATGATACCGTAATTTGTTGACGAACCAAGATG
GCTAAAAatccagatttttttcaaatgaagatATATTCTTGGCACACGAC
CTCCAAAACGGTGATGAGTTGCTCCAGTGGTTGCCACTAAAAGCGAATAC
CAGTTATCTGGGTATTCTCTACAGATgaaatcaaaagataatgacCATTC
TGTGGACAACCGACCAATGTTTCCAATCAATCCAACGTCACTTGGCTTGA
AAGCTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025538TCONS_00025538Clytia hemisphaericatranscript
TCONS_00025539TCONS_00025539Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000539supercontigsc0000539:51602..59458 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.05	0.99	3.3	5.12	0.74	0.86	0.28	0.03	0.01	0.56	0	0.22	3.68	2.78	0.47	0.54	0.44	0	7.14	10.12	0.49	0.47	1.23	1.08	2.99	4.42	0.16	0	0.88	0.31