XLOC_014386 (gene) - C. hemisphaerica

Overview
NameXLOC_014386
Unique NameXLOC_014386
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000541:141997..145358+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014386 ID=XLOC_014386|Name=XLOC_014386|organism=Clytia hemisphaerica|type=gene|length=3362bp|location=Sequence derived from alignment at sc0000541:141997..145358+ (Clytia hemisphaerica)
GACACATTAAAACAGTCATGATTTGCTTATGATATGATATGACAATTACT
CTTTTAAAAAGTCACTCCAAACACTCCGAGGTTACTGCTAAAcagaagag
agagagagagacaaCGTATACGTTCTTTGTGGTTTTTTGTGAAACTGTTG
TAACATTTAATCAGTTATCATGAGGGTTTTgggtttgttatttttgttgg
cAGTACTACTGATGCAACACTGTTGTGTGGAATGCAAAAAAGGTATATCA
GATTTGCACTTGATATTGTGATTTTTAGGAcgaaaaatcgcatttttagg
CTGTAACATCGGCTTCTCCACTAAGACAACGACAAACGAACTCTCACTGT
AAGCGCTccctttttaatatttttctcctTCAAAATAGCTGAAGAATTTG
AGAATTCTTTAGCGCCTGCCGCCCATCACCGCCCAttaataaacaaacaa
acagtctTCGCGTGAGTGGATTGCAACTGCTAAAAAGTTCAGcacatttt
aaatcaaaatttttttctttataggaAAGAAGTCACCGGTAATTGGTTCA
TACAAAAACCGACGAAAATGTCCGTACTTCCAACAATCGGGTTGTTTTTT
AACCATCCTCGAAAACGTGTGCGACTTCTATGAAAACCCTGAAGATTTTG
GACAAGCTAAACTACATTTGTTAATACAATCAGAACATTGTTGCTGCCCA
GAACCGTTCAAGGAATGCCGGGAATTAGACAAAGATGAAAGATGTGTGGA
CATTTTCGCACAAGTAATGGACAAAGTTGACCACGAGAAAAAAACTTATG
CAATGACCTTAAAAGCTTTTAACGATGTTAGACGGGAGCTATTAAAACAA
GATGAGAATTGTGGAAAATATCTTTCGACAAGAAAACCAGTGCAATGCGA
TAATAATGGGATACCACCGTTTAAACTGCAACAGGTTAGTATACtatgtt
tttgttaattgtaaTAAGAAGATCTAAGAATATTCTTCCTGTCAGCCGAA
AACCATaatcttttttaatcattcctaAAAAAACTACTGACCTCAtacaa
tttcgaaaaatttctgaaaaagtcAGCAAATaatctcaaaagtttttttg
ataaattgtcACTTTACTTCAAATAAGGAACTTGCTTCAAACTTTTATTG
TtcaaagactttatttttatgttCAGTTCTTCACTGATAACTGTTCATCT
CTTTGCAGCATCAATGTGAACAGCTATATTGGATTTATGAAGAACTAGGT
ATAGACAATCAAGGTGAGATGCTCGAAGCGAAGTGTCCTTTCAAAAGGAA
ATATCGAGCCTCGAATGAAGACGATGCAAGCGAACGAATCTTGCATCCCG
TTAACGATAGAGAGGAAGAAGAAGCAGGTATCTAAGCTATTCAACGTTTT
GTTTCTATGTAATTTCGCCAAGAAACATTTGAAGTCTTTGTCTTTGAATT
GTCCTTGAATTTTGGGGTCTTAAGCTTGAAAATGTTACTAATTTTCAGTA
TTTTGTAAATATGTGGtgcaatttccaaaaaaatgcttTGTTAAGAGTTC
CTTGAATAAGCCCGAAATACTTAAATTTACTTTATAATACAAGTTTATTG
CTTATTTGCTGAAATTACAAAAGGAAGATGTTTTATCACATTCATAACTA
TTAGAGTGCTGCCTCAGTAGCCCAGCAACCCAGACTCACTTAAGAGCTCA
ACAAACTCACAACCAGATGCTTCTTCTTTTCAGCTTTAACAGATACGTCT
CCTCAACTCTATCGAATCGCTTCATACACTGACCGACGAAAATGTCCTTA
TTGGCAACAATCAGGCTGTTTCTTGGACGAATTAGAGAAAATCTGTGAAG
ACACAAATCCTTTAACTGTTCTACAGGATCAAGAAAACGTCTTTTTATGC
TGCTGTCCAAAACCTTATAAGGCTTGCAAACGAACAGAAGCTgatcaaaa
atgtttgaaaacatTAGAGAAATATTTATCCTACACAGACGAAAAGAAGA
TCGATAAGGACTTTGTAATGTACGGTGTGCAAGCTGCACGAAGTGAATTA
TTATCGCAAGAGCATGGATGCCATTCGTTAGCTACTCCAATACCGTTCGT
TCAATGTTCGAAAGAACCGGCAGCGACACCATTTACTAGACATGACGTCA
TTTGCGAGATGTTGTCATGGCAATGGGAAGAGCTTGGGGATGGAAATAAG
GGAGAGTTTGGGAAAATTAGATGTCTATTTATTGAGAAAGATATGGCGCC
CGATGNTCGCCAAGAAACATTTGAAGTCTTTGTCTTTGAATTGTCCTTGA
ATTTTGGGGTCTTAAGCTTGAAAATGTTACTAATTTTCAGTATTTTGTAA
ATATGTGGtgcaatttccaaaaaaatgcttTGTTAAGAGTTCCTTGAATA
AGCCCGAAATACTTAAATTTACTTTATAATACAAGTTTATTGCTTATTTG
CTGAAATTACAAAAGGAAGATGTTTTATCACATTCATAACTATTAGAGTG
TTGCCTCAGTAGCCCAGCAACCCAGACTCACTTAAGAGCTCAACAAACTC
ACAACCAGATGCTTCTTCTTTTCAGCTTTAACAGATACGTCTCCTCAACT
CTATCGAATCGCTTCATACACTGACCGACGAAAATGTCCTTATTGGCAAC
AATCAGGCTGTTTCTTGGACGAATTAGAGAAAATCTGTGAAGACACAAAC
CCTTTGACTGTTCTACAGGATCAAGAAAACGTCTTTTTATGCTGCTGTCC
AAAACCTTATAAGGCTTGCAAACGATCAGAAGCTGATCAGAAATGTTTGA
AAACATTAGAGAAACATTTATCCTACACAGACGAAAAGAAGATCGATAAG
GACTTTGTAATGCACGGTGTGCAAGCTGCACGAAGTGAATTATTATCGCA
AGAGCATGGATGCCATTCGTTAGCTACTCCAATACCGTTCGTTCAATGTT
CGAAAGAACCGGCAGCGACACCATTTACTAGACATGACGTCATTTGTGAG
ATGTTGTCATGGCAATGGGAAGAGCTTGGGGATGGAAATAAGGGAGAGTT
TGGGAAAATTAGATGTCCATTTATTGAGAAAGATATGGCGCCCGATGTGG
GCGTCAGGAAGGGCGCACTTGGTTTTCTAAGTGAGCATGAAATACACCAA
CCTAAAACTGAGTTGTAAATTTGGATATGCAATCCAAATGTATCAAGTCC
AATCAATTTTATAAGGGTTTAACGCATCGTTTTCTATGGTGAACACGAAT
AAATAATTTGACCATGGCAGGAatcaacccagctggcacacaaagttttt
tcgacgtttatctaacgtttccaACGTcgaacaacgttgtgtgccagctg
gtaaTCTCCGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025628TCONS_00025628Clytia hemisphaericatranscript
TCONS_00025629TCONS_00025629Clytia hemisphaericatranscript
TCONS_00025630TCONS_00025630Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025630-proteinTCONS_00025630-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000541supercontigsc0000541:141997..145358 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75	0.72	1.18	0.9	2.39	1.92	55.72	56.92	30.44	33.35	18.38	17.75	9.08	7.66	10.23	10.82	37.35	28.54	7.19	10.83	11.05	9.51	7.32	10.15	11.28	11.96	0	0.05	0.04	0.07