TCONS_00025630 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025630
Unique NameTCONS_00025630
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1574

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025630 ID=TCONS_00025630|Name=TCONS_00025630|organism=Clytia hemisphaerica|type=transcript|length=1574bp
TGATATGACAATTACTCTTTTAAAAAGTCACTCCAAACACTCCGAGGTTA
CTGCTAAAcagaagagagagagagagacaaCGTATACGTTCTTTGTGGTT
TTTTGTGAAACTGTTGTAACATTTAATCAGTTATCATGAGGGTTTTgggt
ttgttatttttgttggcAGTACTACTGATGCAACACTGTTGTGTGGAATG
CAAAAAAGgaAAGAAGTCACCGGTAATTGGTTCATACAAAAACCGACGAA
AATGTCCGTACTTCCAACAATCGGGTTGTTTTTTAACCATCCTCGAAAAC
GTGTGCGACTTCTATGAAAACCCTGAAGATTTTGGACAAGCTAAACTACA
TTTGTTAATACAATCAGAACATTGTTGCTGCCCAGAACCGTTCAAGGAAT
GCCGGGAATTAGACAAAGATGAAAGATGTGTGGACATTTTCGCACAAGTA
ATGGACAAAGTTGACCACGAGAAAAAAACTTATGCAATGACCTTAAAAGC
TTTTAACGATGTTAGACGGGAGCTATTAAAACAAGATGAGAATTGTGGAA
AATATCTTTCGACAAGAAAACCAGTGCAATGCGATAATAATGGGATACCA
CCGTTTAAACTGCAACAGCATCAATGTGAACAGCTATATTGGATTTATGA
AGAACTAGGTATAGACAATCAAGGTGAGATGCTCGAAGCGAAGTGTCCTT
TCAAAAGGAAATATCGAGCCTCGAATGAAGACGATGCAAGCGAACGAATC
TTGCATCCCGTTAACGATAGAGAGGAAGAAGAAGCAGCTTTAACAGATAC
GTCTCCTCAACTCTATCGAATCGCTTCATACACTGACCGACGAAAATGTC
CTTATTGGCAACAATCAGGCTGTTTCTTGGACGAATTAGAGAAAATCTGT
GAAGACACAAATCCTTTAACTGTTCTACAGGATCAAGAAAACGTCTTTTT
ATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAACGATCAGAAGCTGATC
AGAAATGTTTGAAAACATTAGAGAAACATTTATCCTACACAGACGAAAAG
AAGATCGATAAGGACTTTGTAATGCACGGTGTGCAAGCTGCACGAAGTGA
ATTATTATCGCAAGAGCATGGATGCCATTCGTTAGCTACTCCAATACCGT
TCGTTCAATGTTCGAAAGAACCGGCAGCGACACCATTTACTAGACATGAC
GTCATTTGTGAGATGTTGTCATGGCAATGGGAAGAGCTTGGGGATGGAAA
TAAGGGAGAGTTTGGGAAAATTAGATGTCCATTTATTGAGAAAGATATGG
CGCCCGATGTGGGCGTCAGGAAGGGCGCACTTGGTTTTCTAAGTGAGCAT
GAAATACACCAACCTAAAACTGAGTTGTAAATTTGGATATGCAATCCAAA
TGTATCAAGTCCAATCAATTTTATAAGGGTTTAACGCATCGTTTTCTATG
GTGAACACGAATAAATAATTTGACCATGGCAGGAatcaacccagctggca
cacaaagttttttcgacgtttatctaacgtttccaACGTcgaacaacgtt
gtgtgccagctggtaaTCTCCGTG
Run BLAST on NCBI

protein sequence of TCONS_00025630-protein

>TCONS_00025630-protein ID=TCONS_00025630-protein|Name=TCONS_00025630-protein|organism=Clytia hemisphaerica|type=polypeptide|length=414bp
MRVLGLLFLLAVLLMQHCCVECKKGKKSPVIGSYKNRRKCPYFQQSGCFL
TILENVCDFYENPEDFGQAKLHLLIQSEHCCCPEPFKECRELDKDERCVD
IFAQVMDKVDHEKKTYAMTLKAFNDVRRELLKQDENCGKYLSTRKPVQCD
NNGIPPFKLQQHQCEQLYWIYEELGIDNQGEMLEAKCPFKRKYRASNEDD
ASERILHPVNDREEEEAALTDTSPQLYRIASYTDRRKCPYWQQSGCFLDE
LEKICEDTNPLTVLQDQENVFLCCCPKPYKACKRSEADQKCLKTLEKHLS
YTDEKKIDKDFVMHGVQAARSELLSQEHGCHSLATPIPFVQCSKEPAATP
FTRHDVICEMLSWQWEELGDGNKGEFGKIRCPFIEKDMAPDVGVRKGALG
FLSEHEIHQPKTEL
Run BLAST on NCBI

transcript from alignment at sc0000541:142031..145358+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025630 ID=TCONS_00025630|Name=TCONS_00025630|organism=Clytia hemisphaerica|type=transcript|length=3328bp|location=Sequence derived from alignment at sc0000541:142031..145358+ (Clytia hemisphaerica)
TGATATGACAATTACTCTTTTAAAAAGTCACTCCAAACACTCCGAGGTTA
CTGCTAAAcagaagagagagagagagacaaCGTATACGTTCTTTGTGGTT
TTTTGTGAAACTGTTGTAACATTTAATCAGTTATCATGAGGGTTTTgggt
ttgttatttttgttggcAGTACTACTGATGCAACACTGTTGTGTGGAATG
CAAAAAAGGTATATCAGATTTGCACTTGATATTGTGATTTTTAGGAcgaa
aaatcgcatttttaggCTGTAACATCGGCTTCTCCACTAAGACAACGACA
AACGAACTCTCACTGTAAGCGCTccctttttaatatttttctcctTCAAA
ATAGCTGAAGAATTTGAGAATTCTTTAGCGCCTGCCGCCCATCACCGCCC
AttaataaacaaacaaacagtctTCGCGTGAGTGGATTGCAACTGCTAAA
AAGTTCAGcacattttaaatcaaaatttttttctttataggaAAGAAGTC
ACCGGTAATTGGTTCATACAAAAACCGACGAAAATGTCCGTACTTCCAAC
AATCGGGTTGTTTTTTAACCATCCTCGAAAACGTGTGCGACTTCTATGAA
AACCCTGAAGATTTTGGACAAGCTAAACTACATTTGTTAATACAATCAGA
ACATTGTTGCTGCCCAGAACCGTTCAAGGAATGCCGGGAATTAGACAAAG
ATGAAAGATGTGTGGACATTTTCGCACAAGTAATGGACAAAGTTGACCAC
GAGAAAAAAACTTATGCAATGACCTTAAAAGCTTTTAACGATGTTAGACG
GGAGCTATTAAAACAAGATGAGAATTGTGGAAAATATCTTTCGACAAGAA
AACCAGTGCAATGCGATAATAATGGGATACCACCGTTTAAACTGCAACAG
GTTAGTATACtatgtttttgttaattgtaaTAAGAAGATCTAAGAATATT
CTTCCTGTCAGCCGAAAACCATaatcttttttaatcattcctaAAAAAAC
TACTGACCTCAtacaatttcgaaaaatttctgaaaaagtcAGCAAATaat
ctcaaaagtttttttgataaattgtcACTTTACTTCAAATAAGGAACTTG
CTTCAAACTTTTATTGTtcaaagactttatttttatgttCAGTTCTTCAC
TGATAACTGTTCATCTCTTTGCAGCATCAATGTGAACAGCTATATTGGAT
TTATGAAGAACTAGGTATAGACAATCAAGGTGAGATGCTCGAAGCGAAGT
GTCCTTTCAAAAGGAAATATCGAGCCTCGAATGAAGACGATGCAAGCGAA
CGAATCTTGCATCCCGTTAACGATAGAGAGGAAGAAGAAGCAGGTATCTA
AGCTATTCAACGTTTTGTTTCTATGTAATTTCGCCAAGAAACATTTGAAG
TCTTTGTCTTTGAATTGTCCTTGAATTTTGGGGTCTTAAGCTTGAAAATG
TTACTAATTTTCAGTATTTTGTAAATATGTGGtgcaatttccaaaaaaat
gcttTGTTAAGAGTTCCTTGAATAAGCCCGAAATACTTAAATTTACTTTA
TAATACAAGTTTATTGCTTATTTGCTGAAATTACAAAAGGAAGATGTTTT
ATCACATTCATAACTATTAGAGTGCTGCCTCAGTAGCCCAGCAACCCAGA
CTCACTTAAGAGCTCAACAAACTCACAACCAGATGCTTCTTCTTTTCAGC
TTTAACAGATACGTCTCCTCAACTCTATCGAATCGCTTCATACACTGACC
GACGAAAATGTCCTTATTGGCAACAATCAGGCTGTTTCTTGGACGAATTA
GAGAAAATCTGTGAAGACACAAATCCTTTAACTGTTCTACAGGATCAAGA
AAACGTCTTTTTATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAACGAA
CAGAAGCTgatcaaaaatgtttgaaaacatTAGAGAAATATTTATCCTAC
ACAGACGAAAAGAAGATCGATAAGGACTTTGTAATGTACGGTGTGCAAGC
TGCACGAAGTGAATTATTATCGCAAGAGCATGGATGCCATTCGTTAGCTA
CTCCAATACCGTTCGTTCAATGTTCGAAAGAACCGGCAGCGACACCATTT
ACTAGACATGACGTCATTTGCGAGATGTTGTCATGGCAATGGGAAGAGCT
TGGGGATGGAAATAAGGGAGAGTTTGGGAAAATTAGATGTCTATTTATTG
AGAAAGATATGGCGCCCGATGNTCGCCAAGAAACATTTGAAGTCTTTGTC
TTTGAATTGTCCTTGAATTTTGGGGTCTTAAGCTTGAAAATGTTACTAAT
TTTCAGTATTTTGTAAATATGTGGtgcaatttccaaaaaaatgcttTGTT
AAGAGTTCCTTGAATAAGCCCGAAATACTTAAATTTACTTTATAATACAA
GTTTATTGCTTATTTGCTGAAATTACAAAAGGAAGATGTTTTATCACATT
CATAACTATTAGAGTGTTGCCTCAGTAGCCCAGCAACCCAGACTCACTTA
AGAGCTCAACAAACTCACAACCAGATGCTTCTTCTTTTCAGCTTTAACAG
ATACGTCTCCTCAACTCTATCGAATCGCTTCATACACTGACCGACGAAAA
TGTCCTTATTGGCAACAATCAGGCTGTTTCTTGGACGAATTAGAGAAAAT
CTGTGAAGACACAAACCCTTTGACTGTTCTACAGGATCAAGAAAACGTCT
TTTTATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAACGATCAGAAGCT
GATCAGAAATGTTTGAAAACATTAGAGAAACATTTATCCTACACAGACGA
AAAGAAGATCGATAAGGACTTTGTAATGCACGGTGTGCAAGCTGCACGAA
GTGAATTATTATCGCAAGAGCATGGATGCCATTCGTTAGCTACTCCAATA
CCGTTCGTTCAATGTTCGAAAGAACCGGCAGCGACACCATTTACTAGACA
TGACGTCATTTGTGAGATGTTGTCATGGCAATGGGAAGAGCTTGGGGATG
GAAATAAGGGAGAGTTTGGGAAAATTAGATGTCCATTTATTGAGAAAGAT
ATGGCGCCCGATGTGGGCGTCAGGAAGGGCGCACTTGGTTTTCTAAGTGA
GCATGAAATACACCAACCTAAAACTGAGTTGTAAATTTGGATATGCAATC
CAAATGTATCAAGTCCAATCAATTTTATAAGGGTTTAACGCATCGTTTTC
TATGGTGAACACGAATAAATAATTTGACCATGGCAGGAatcaacccagct
ggcacacaaagttttttcgacgtttatctaacgtttccaACGTcgaacaa
cgttgtgtgccagctggtaaTCTCCGTG

Coding sequence (CDS) from alignment at sc0000541:142031..145358+

>TCONS_00025630 ID=TCONS_00025630|Name=TCONS_00025630|organism=Clytia hemisphaerica|type=CDS|length=6225bp|location=Sequence derived from alignment at sc0000541:142031..145358+ (Clytia hemisphaerica)
ATGAGGGTTTTgggtttgttatttttgttggcAGTACTACTGATGCAACA
CTGTTGTGTGGAATGCAAAAAAGgaAAGAAGTCACCGGTAATTGGTTCAT
ACAAAAACCGACGAAAATGTCCGTACTTCCAACAATCGGGTTGTTTTTTA
ACCATCCTCGAAAACGTGTGCGACTTCTATGAAAACCCTGAAGATTTTGG
ACAAGCTAAACTACATTTGTTAATACAATCAGAACATTGTTGCTGCCCAG
AACCGTTCAAGGAATGCCGGGAATTAGACAAAGATGAAAGATGTGTGGAC
ATTTTCGCACAAGTAATGGACAAAGTTGACCACGAGAAAAAAACTTATGC
AATGACCTTAAAAGCTTTTAACGATGTTAGACGGGAGCTATTAAAACAAG
ATGAGAATTGTGGAAAATATCTTTCGACAAGAAAACCAGTGCAATGCGAT
AATAATGGGATACCACCGTTTAAACTGCAACAGCATCAATGTGAACAGCT
ATATTGGATTTATGAAGAACTAGGTATAGACAATCAAGGTGAGATGCTCG
AAGCGAAGTGTCCTTTCAAAAGGAAATATCGAGCCTCGAATGAAGACGAT
GCAAGCGAACGAATCTTGCATCCCGTTAACGATAGAGAGGAAGAAGAAGC
AGCTTTAACAGATACGTCTCCTCAACTCTATCGAATCGCTTCATACACTG
ACCGACGAAAATGTCCTTATTGGCAACAATCAGGCTGTTTCTTGGACGAA
TTAGAGAAAATCTGTGAAGACACAAATCCTTTAACTGTTCTACAGGATCA
AGAAAACGTCTTTTTATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAAC
GATCAGAAGCTGATCAGAAATGTTTGAAAACATTAGAGAAACATTTATCC
TACACAGACGAAAAGAAGATCGATAAGGACTTTGTAATGCACGGTGTGCA
AGCTGCACGAAGTGAATTATTATCGCAAGAGCATGGATGCCATTCGTTAG
CTACTCCAATACCGTTCGTTCAATGTTCGAAAGAACCGGCAGCGACACCA
TTTACTAGACATGACGTCATTTGTGAGATGTTGTCATGGCAATGGGAAGA
GCTTGGGGATGGAAATAAGGGAGAGTTTGGGAAAATTAGATGTCCATTTA
TTGAGAAAGATATGGCGCCCGATGTGGGCGTCAGGAAGGGCGCACTTGGT
TTTCTAAGTGAGCATGAAATACACCAACCTAAAACTGAGTTGTAAATGAG
GGTTTTgggtttgttatttttgttggcAGTACTACTGATGCAACACTGTT
GTGTGGAATGCAAAAAAGgaAAGAAGTCACCGGTAATTGGTTCATACAAA
AACCGACGAAAATGTCCGTACTTCCAACAATCGGGTTGTTTTTTAACCAT
CCTCGAAAACGTGTGCGACTTCTATGAAAACCCTGAAGATTTTGGACAAG
CTAAACTACATTTGTTAATACAATCAGAACATTGTTGCTGCCCAGAACCG
TTCAAGGAATGCCGGGAATTAGACAAAGATGAAAGATGTGTGGACATTTT
CGCACAAGTAATGGACAAAGTTGACCACGAGAAAAAAACTTATGCAATGA
CCTTAAAAGCTTTTAACGATGTTAGACGGGAGCTATTAAAACAAGATGAG
AATTGTGGAAAATATCTTTCGACAAGAAAACCAGTGCAATGCGATAATAA
TGGGATACCACCGTTTAAACTGCAACAGCATCAATGTGAACAGCTATATT
GGATTTATGAAGAACTAGGTATAGACAATCAAGGTGAGATGCTCGAAGCG
AAGTGTCCTTTCAAAAGGAAATATCGAGCCTCGAATGAAGACGATGCAAG
CGAACGAATCTTGCATCCCGTTAACGATAGAGAGGAAGAAGAAGCAGCTT
TAACAGATACGTCTCCTCAACTCTATCGAATCGCTTCATACACTGACCGA
CGAAAATGTCCTTATTGGCAACAATCAGGCTGTTTCTTGGACGAATTAGA
GAAAATCTGTGAAGACACAAATCCTTTAACTGTTCTACAGGATCAAGAAA
ACGTCTTTTTATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAACGATCA
GAAGCTGATCAGAAATGTTTGAAAACATTAGAGAAACATTTATCCTACAC
AGACGAAAAGAAGATCGATAAGGACTTTGTAATGCACGGTGTGCAAGCTG
CACGAAGTGAATTATTATCGCAAGAGCATGGATGCCATTCGTTAGCTACT
CCAATACCGTTCGTTCAATGTTCGAAAGAACCGGCAGCGACACCATTTAC
TAGACATGACGTCATTTGTGAGATGTTGTCATGGCAATGGGAAGAGCTTG
GGGATGGAAATAAGGGAGAGTTTGGGAAAATTAGATGTCCATTTATTGAG
AAAGATATGGCGCCCGATGTGGGCGTCAGGAAGGGCGCACTTGGTTTTCT
AAGTGAGCATGAAATACACCAACCTAAAACTGAGTTGTAAATGAGGGTTT
TgggtttgttatttttgttggcAGTACTACTGATGCAACACTGTTGTGTG
GAATGCAAAAAAGgaAAGAAGTCACCGGTAATTGGTTCATACAAAAACCG
ACGAAAATGTCCGTACTTCCAACAATCGGGTTGTTTTTTAACCATCCTCG
AAAACGTGTGCGACTTCTATGAAAACCCTGAAGATTTTGGACAAGCTAAA
CTACATTTGTTAATACAATCAGAACATTGTTGCTGCCCAGAACCGTTCAA
GGAATGCCGGGAATTAGACAAAGATGAAAGATGTGTGGACATTTTCGCAC
AAGTAATGGACAAAGTTGACCACGAGAAAAAAACTTATGCAATGACCTTA
AAAGCTTTTAACGATGTTAGACGGGAGCTATTAAAACAAGATGAGAATTG
TGGAAAATATCTTTCGACAAGAAAACCAGTGCAATGCGATAATAATGGGA
TACCACCGTTTAAACTGCAACAGCATCAATGTGAACAGCTATATTGGATT
TATGAAGAACTAGGTATAGACAATCAAGGTGAGATGCTCGAAGCGAAGTG
TCCTTTCAAAAGGAAATATCGAGCCTCGAATGAAGACGATGCAAGCGAAC
GAATCTTGCATCCCGTTAACGATAGAGAGGAAGAAGAAGCAGCTTTAACA
GATACGTCTCCTCAACTCTATCGAATCGCTTCATACACTGACCGACGAAA
ATGTCCTTATTGGCAACAATCAGGCTGTTTCTTGGACGAATTAGAGAAAA
TCTGTGAAGACACAAATCCTTTAACTGTTCTACAGGATCAAGAAAACGTC
TTTTTATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAACGATCAGAAGC
TGATCAGAAATGTTTGAAAACATTAGAGAAACATTTATCCTACACAGACG
AAAAGAAGATCGATAAGGACTTTGTAATGCACGGTGTGCAAGCTGCACGA
AGTGAATTATTATCGCAAGAGCATGGATGCCATTCGTTAGCTACTCCAAT
ACCGTTCGTTCAATGTTCGAAAGAACCGGCAGCGACACCATTTACTAGAC
ATGACGTCATTTGTGAGATGTTGTCATGGCAATGGGAAGAGCTTGGGGAT
GGAAATAAGGGAGAGTTTGGGAAAATTAGATGTCCATTTATTGAGAAAGA
TATGGCGCCCGATGTGGGCGTCAGGAAGGGCGCACTTGGTTTTCTAAGTG
AGCATGAAATACACCAACCTAAAACTGAGTTGTAAATGAGGGTTTTgggt
ttgttatttttgttggcAGTACTACTGATGCAACACTGTTGTGTGGAATG
CAAAAAAGgaAAGAAGTCACCGGTAATTGGTTCATACAAAAACCGACGAA
AATGTCCGTACTTCCAACAATCGGGTTGTTTTTTAACCATCCTCGAAAAC
GTGTGCGACTTCTATGAAAACCCTGAAGATTTTGGACAAGCTAAACTACA
TTTGTTAATACAATCAGAACATTGTTGCTGCCCAGAACCGTTCAAGGAAT
GCCGGGAATTAGACAAAGATGAAAGATGTGTGGACATTTTCGCACAAGTA
ATGGACAAAGTTGACCACGAGAAAAAAACTTATGCAATGACCTTAAAAGC
TTTTAACGATGTTAGACGGGAGCTATTAAAACAAGATGAGAATTGTGGAA
AATATCTTTCGACAAGAAAACCAGTGCAATGCGATAATAATGGGATACCA
CCGTTTAAACTGCAACAGCATCAATGTGAACAGCTATATTGGATTTATGA
AGAACTAGGTATAGACAATCAAGGTGAGATGCTCGAAGCGAAGTGTCCTT
TCAAAAGGAAATATCGAGCCTCGAATGAAGACGATGCAAGCGAACGAATC
TTGCATCCCGTTAACGATAGAGAGGAAGAAGAAGCAGCTTTAACAGATAC
GTCTCCTCAACTCTATCGAATCGCTTCATACACTGACCGACGAAAATGTC
CTTATTGGCAACAATCAGGCTGTTTCTTGGACGAATTAGAGAAAATCTGT
GAAGACACAAATCCTTTAACTGTTCTACAGGATCAAGAAAACGTCTTTTT
ATGCTGCTGTCCAAAACCTTATAAGGCTTGCAAACGATCAGAAGCTGATC
AGAAATGTTTGAAAACATTAGAGAAACATTTATCCTACACAGACGAAAAG
AAGATCGATAAGGACTTTGTAATGCACGGTGTGCAAGCTGCACGAAGTGA
ATTATTATCGCAAGAGCATGGATGCCATTCGTTAGCTACTCCAATACCGT
TCGTTCAATGTTCGAAAGAACCGGCAGCGACACCATTTACTAGACATGAC
GTCATTTGTGAGATGTTGTCATGGCAATGGGAAGAGCTTGGGGATGGAAA
TAAGGGAGAGTTTGGGAAAATTAGATGTCCATTTATTGAGAAAGATATGG
CGCCCGATGTGGGCGTCAGGAAGGGCGCACTTGGTTTTCTAAGTGAGCAT
GAAATACACCAACCTAAAACTGAGTTGTAAATGAGGGTTTTgggtttgtt
atttttgttggcAGTACTACTGATGCAACACTGTTGTGTGGAATGCAAAA
AAGgaAAGAAGTCACCGGTAATTGGTTCATACAAAAACCGACGAAAATGT
CCGTACTTCCAACAATCGGGTTGTTTTTTAACCATCCTCGAAAACGTGTG
CGACTTCTATGAAAACCCTGAAGATTTTGGACAAGCTAAACTACATTTGT
TAATACAATCAGAACATTGTTGCTGCCCAGAACCGTTCAAGGAATGCCGG
GAATTAGACAAAGATGAAAGATGTGTGGACATTTTCGCACAAGTAATGGA
CAAAGTTGACCACGAGAAAAAAACTTATGCAATGACCTTAAAAGCTTTTA
ACGATGTTAGACGGGAGCTATTAAAACAAGATGAGAATTGTGGAAAATAT
CTTTCGACAAGAAAACCAGTGCAATGCGATAATAATGGGATACCACCGTT
TAAACTGCAACAGCATCAATGTGAACAGCTATATTGGATTTATGAAGAAC
TAGGTATAGACAATCAAGGTGAGATGCTCGAAGCGAAGTGTCCTTTCAAA
AGGAAATATCGAGCCTCGAATGAAGACGATGCAAGCGAACGAATCTTGCA
TCCCGTTAACGATAGAGAGGAAGAAGAAGCAGCTTTAACAGATACGTCTC
CTCAACTCTATCGAATCGCTTCATACACTGACCGACGAAAATGTCCTTAT
TGGCAACAATCAGGCTGTTTCTTGGACGAATTAGAGAAAATCTGTGAAGA
CACAAATCCTTTAACTGTTCTACAGGATCAAGAAAACGTCTTTTTATGCT
GCTGTCCAAAACCTTATAAGGCTTGCAAACGATCAGAAGCTGATCAGAAA
TGTTTGAAAACATTAGAGAAACATTTATCCTACACAGACGAAAAGAAGAT
CGATAAGGACTTTGTAATGCACGGTGTGCAAGCTGCACGAAGTGAATTAT
TATCGCAAGAGCATGGATGCCATTCGTTAGCTACTCCAATACCGTTCGTT
CAATGTTCGAAAGAACCGGCAGCGACACCATTTACTAGACATGACGTCAT
TTGTGAGATGTTGTCATGGCAATGGGAAGAGCTTGGGGATGGAAATAAGG
GAGAGTTTGGGAAAATTAGATGTCCATTTATTGAGAAAGATATGGCGCCC
GATGTGGGCGTCAGGAAGGGCGCACTTGGTTTTCTAAGTGAGCATGAAAT
ACACCAACCTAAAACTGAGTTGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014386XLOC_014386Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025630-exon-sc0000541-1491911889:142031..142238TCONS_00025630-exon-sc0000541-1491911889:142031..142238Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1510915933:142031..142238TCONS_00025630-exon-sc0000541-1510915933:142031..142238Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1575043694:142031..142238TCONS_00025630-exon-sc0000541-1575043694:142031..142238Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1491911889:142521..142930TCONS_00025630-exon-sc0000541-1491911889:142521..142930Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1510915933:142521..142930TCONS_00025630-exon-sc0000541-1510915933:142521..142930Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1575043694:142521..142930TCONS_00025630-exon-sc0000541-1575043694:142521..142930Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1491911889:143205..143373TCONS_00025630-exon-sc0000541-1491911889:143205..143373Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1510915933:143205..143373TCONS_00025630-exon-sc0000541-1510915933:143205..143373Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1575043694:143205..143373TCONS_00025630-exon-sc0000541-1575043694:143205..143373Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1491911889:143730..143917TCONS_00025630-exon-sc0000541-1491911889:143730..143917Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1510915933:143730..143917TCONS_00025630-exon-sc0000541-1510915933:143730..143917Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1575043694:143730..143917TCONS_00025630-exon-sc0000541-1575043694:143730..143917Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1491911889:144760..145358TCONS_00025630-exon-sc0000541-1491911889:144760..145358Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1510915933:144760..145358TCONS_00025630-exon-sc0000541-1510915933:144760..145358Clytia hemisphaericaexon
TCONS_00025630-exon-sc0000541-1575043694:144760..145358TCONS_00025630-exon-sc0000541-1575043694:144760..145358Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025630-proteinTCONS_00025630-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000541supercontigsc0000541:142031..145358 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.380407	0	0	0	1.13234	0	5.67559	0.00448756	0.45436	0	2.71526e-07	0.640324	2.40603e-06	0	1.28128	2.26743	11.2369	6.19507	2.59817	0.955016	4.054	2.37051	2.08071	2.3882	6.02041e-05	0	0	0	0	0.0293916
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003204Cyt_c_oxidase_su5A/6
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025630 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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