XLOC_014689 (gene) - C. hemisphaerica

Overview
NameXLOC_014689
Unique NameXLOC_014689
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000563:71526..77213+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014689 ID=XLOC_014689|Name=XLOC_014689|organism=Clytia hemisphaerica|type=gene|length=5688bp|location=Sequence derived from alignment at sc0000563:71526..77213+ (Clytia hemisphaerica)
CTGCCTACTCCCTCGAAGTTGGAACACAAACTGGTACCACACCGCCAGCT
GTCCCCTGCCCAGACTCCCTCTGCAAAGGAAAATCTGACGGAAACTTCGA
ATATCACTACTATGGCCGATACAGAGCCAACTACTTCCTCCAATGCTCGA
ACGGATTAGCTTCTTGCCAACCATGCTTCCCATTGTCCTTGGAATTCAGC
GAAGGATGCAACCAATGTTTGTACAACCGAAAAGACGAGTGCGTCACCAC
ACAACCATGGGAACCAGCAACCACCTTCGCTTGCCCAGACAAATGCCCAG
CCCGTGGACCACACTTCAGCGGAAACATCAAAGACGACCATGAACCACGA
CAATACGTCGCTTGCTTCCACGGACAAACTGTTGGATGTATCGCTTGCCC
ATCAGGACTTTTGTTCAACGAGAAATGGAACGCCTGTTTGTACCAAGGAA
AATACAAGACCGAACCAGAATCCCCACCAAAACACTAAACGGTGTTTTAA
TTGTAATCGATTCAAATGGCATGAAGATCTCAACAGCCGATCAAAATAAT
GACAACAAACTAAAAACGAAAACATTTTATTCGGCATTTTTTAAAGTTCT
CACtcttgactgaaattttttttattctgtcACATTGTATATTAAAGTAT
TTAAATGCAATAAAACCAATCTCTCTCTACTAAAATCATGTCTTTTTAAT
ATATGGAATACAAATCAACTGACATCTCTTTTCAAAGCAACAGAAAATTT
ACCAAATCGTTCACTACTAGTATCACTGCACTCTTCCAAATGTTCTCCTG
AGAAGATGATTCAATTTGTTttctcgtttttctttttataagacacccct
gtctcagtgccccggtagaactttttccctcagtggggatgaagatttct
atcaaaatgccaatttgaatagaaaatctattgtttccagctcgaaaatt
ccagtggggatggttttggagtgcaattttctacattcaattttcaatgg
ggataaaatcatagagcaatttcgcagtggggttgaaattgtaggatatt
ttttccaccggggacgattttttggcctatttttccactggggtgggggt
ccaccgggtctgtgacacagggggtGTTATAAGGTTCCTCTCTCCTGACA
GTATAAACTAGAAGTTTTTTTCGGGAGGGCTGGAACCTTTTAGTGTTGTA
TTCTATGTTCGTGCCATTacttatatatataaaaaatgatTCAATAGATA
AAATTGATAGTATTTCATCCTAGTCAACATTCTTATTCATATTTTTAACA
AGTGGGAAtcagaaatctttttttagcTTTCAGACATAGGGGAAATACAA
TTTGACAGTACACATCCGTATCAGTAACCCGGTCAGATCCTCCTGGTGAg
taaattgttgaaaaaattgctaaaaacggTCTAATTTTAAGCACAATGGA
ATAATGAGTGGACTTGGTCAGAATTAATCTCATTTTTCCACCCCGGGCAg
aatttggaaatttgtatttaattttcgtattttgcGAATAACAACCCAAC
ATATTGAAACGCTTTTCTAtttgacacccctgtgtcacagactcgGTGGG
ACCCCAGTcatactggaaaatttggctaaaatggCGTCCCCTGTgggaaa
atacccaaaaatttCAGTacattgttttggttttcatcccatttgaaatt
gaatggaaaagaatgcactctaaaaccatcccactgaatttttacTCCCA
TTGGCATTTCAATAagaattttcatccccactgaaaataaaagttccagc
ggggctgtgaaacaggggtgttattTGGGCTCAAATATTGattaaaattg
ctaaaaattaGCGAAAAAGGCGAAATATCTTCATcgcaaaaaaacattta
aaaagacATTACTTAAAGTATCATGTTTACATAATCGTCAGATGTATTGA
ATAATTCCAAAGGTCATTTTCCATTTTCCGGTTCTGTCTTACTTATCTTT
ACTGGATACATCCGTTAAGTCAGTCAATACATAGTCGTTTCTCCTTTTCT
CATGGCTGTTGTGATATATTTGCCACTAAGTCCAGTGTTATCTTCAATGA
TTTTGCACAGGGTGATGTTAGGTCTACCAGATCGCCTATCTTCTCCGGGG
ATCCAGTTCAGTAGTTTTCAAGTAGGTTTATTGTGTCTTACAACATGACT
GGCTAAAGCTAAGCGTTGGCGACGGTCAACATTTAAAATTCAGGGCAATT
TACCATAGATTGAGCAATAGTTTGataattcttccaagaaatatcaAAGG
CTGCCGATTGAATTCTTGTATAGATAGAGCGGAGCCATATAACAGTATAG
ATTCAACACAAATTTCAGCACTTTAGTTTTGGTAGgtttcaaaatgtttg
atttcaaTACTTTGCGAAGGGAATGTTTCAGTGTAACTTCCAAGATATAG
AAAGTCGTCAACTCTTTCGATCCCTGAACCATCCGAGGAAAACACTTTGt
catcccgggggggggggTACTAGGGTTGGCGAATGAGGGGTATGTGCGGA
CGGGACCTCCGAAAACCGACCCTTAGAGAGACTGATTTTTGCTTAAAAGG
TGACCCTTAAAGAGACTTTATGAATTTTTTTTTCTATTTTTGAAAAAAGG
CATACCCTTAGAGAGACTttattacaattttttctctggaaatcaaaaaa
tttcctaaaaatcctgaattttccgacccttagagagactaatttaaaac
tttctgatttttccgacacCATTAGTGTGGTTTGATGTGgataaattttg
ttttattgcATTTAAGAATAGACCTACATTTTGACATGCTAGTTCCACAG
AACAAAGAAAAGTCTGAACAGCATGAGTATGATTTCCTAGTATAGCAATA
TGGTCTAGATCAGGTAGTCGCTCAGAAGGGTTTCTCCTACTGCGACGACG
TTTTAAAGTAAGGCCATATTGTCACTAGCAATTGACGATCCAAGAGCGTA
GTCCAGTACAATTATGAAGAGAAAAGGTGCTTAAGGATTGCCTTGAAAAA
CCCCAATCCCGATTATGAAAGGATCAGTTTGTTCTTTGCAGGATGTACTC
ATCGCAGGAGTGTCTCGATACATTACTTTAATGGCATTGACTACAGTTTT
AGGGATACCATAAGCTTGAAAAGAATTTGGAATATTTAATTTCACAATTa
ataaagtcaaaaactttgtggAAATCGGTGAACGGGATTAAGTTCTTTCA
AGTTCCTACATAAAGCAAGGACATAGGAGTTATAGGATTATATActttaa
aagtaatttgtcCTCTCTAGTTATCTAAAACCTTCATTTCACTCAATTTA
CTGGTAAAATTGTATGTCATTGAAATTTAGAATAGTAGTTCCATATGGTC
TCAAAACTATCAAATCATCCGTAGTTGATTGGATTTTTTGGGGTTTTTAT
TCGATCTATAAACTCCTGTAAACATAAAATTCAttacaaaaagttttatt
tatcTGCAGCCAAGCGCTTCTTCCCATAGGTAAGCCAGCATAGAGTGCTG
TAGTTTTATTGAGGAGCTGCTTCATTTCTTTCATGAATGATGAAAAGCCT
TTGTAAAATTTCGCGCACCCTTATATGGTCAGATATGACTAAATTACACC
ACTTTTTCTTGACATCACTATAAACTGAGCATTGTAAGAATAATTCTAAC
GATGACATGGACTTTGCCTCCAGGAAAGTCACCCCTaggaaaaattgcca
aattatTGATACTGGTAATATGCTTAAACTTAACATGGGGAGATGTGCTC
TGCATCTTCGATTCTTTGAATAGCAATATGATTGAGGCATGCGCTATAAA
TCTGATAGTCCGTCTCCCCAGATtaaatttcagagaaagctGAACTTTGG
AGCACGTGGTACTATAACGTATTGTTGaaatacacaaatttccaaACAAC
CCACTAATCTAACTTTAATCACCTGGAAATCATAATTACCGGGCTCGCAT
AACATCATCATTTAGCTTATTATAATTCTTCGTTACATCACAATGATAAT
ATCCTGTAATGTGGTAACAAATTTTGATGAGAACTCTGTAACTTCCGAGA
TTAGGAAAAAACGGTATGGGACGAGGAATGGTTGGCATAAACAGGTTATA
ATCTCTTATCACGTGGTCATTAGCGTGATTTTAAGGAATTTTATTGCATG
AGATGGGAAACAGATTGTTTGACAAAATGATAATACAGCACTTCCTCAAA
GCGCATCGACATTATTTTTAGTTTACCCGGAAACTtatataatcaaatca
attagaaaatgattttccaTGATAGGCCTCCAGTATAAAAACGTGGAgtt
ttgcatttcaaaatcaTCTTGCATCTGAAGACAACAACTTCAAGAAAAAG
ACAACAAAAATGAAGGCTTTTATTTTCATCACTCTTTTGGCTGGTAAGTA
TTTTATTATGTTAACAAATACATATTTCTTTGTCCTTTCAAGGAGTACTA
TTTTATCTATTTTCGCAAATGTCTAAAAAATGAAGCAATCTCGACTTCAA
CTTGATTGAATACGATTAGAATGATGTTCAAACATTTTTACTGGTCATGA
TGAACGATGGATACTAACAAAgcacttcttttttttcagctgCCTACTCC
CTCGAAGTTGGAACCCAAACTGGTACCACACCACCTGCTGTTCCATGCCC
AGACTCCCTCTGCAAAGGAAAATCTGACGGAAACTTCGAATATCACTACT
ATGGCCGATACAGAGCCAACTACTTCCTCCAATGCTCCAACGGATTAGCT
TCTTGCCAACCATGCTTCCCATTGTCCTTGGAATTCAGCGAAGGNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGGAAACATCAAAGA
CGACCATGAACCACGACAATACGTCGCTTGCTTCCACGGACAAACTGTCG
GATGTATCGCTTGCCCATCAGGACTTTTGTTCAACGAGAAATGGAACGCC
TGTTTGTACCAAGGAAAATACAAGACCGAACCAGAATCCCCACCAAAACA
CTAAGAATCGAAATTGATTTAAACTGCAAGAAGATCTCAGGGGCAGTCAA
AATTGACAACAAACTAAAAACGAAAACATTTTATTCAATATCTTTTTAAA
CTCtcaatttttcttgattttacgcATATTCTTCTCTc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026124TCONS_00026124Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026124-proteinTCONS_00026124-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000563supercontigsc0000563:71526..77213 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38	0.2	0.6	0	0	0.57	0	0	0.25	0	0	0	17.95	24.23	872.09	214.15	13.39	1.86	0.43	0	0	0	0	0	0.09	0	0.51	0.03	0	0.09