XLOC_015052 (gene) - C. hemisphaerica

Overview
NameXLOC_015052
Unique NameXLOC_015052
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000587:187691..196086-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015052 ID=XLOC_015052|Name=XLOC_015052|organism=Clytia hemisphaerica|type=gene|length=8396bp|location=Sequence derived from alignment at sc0000587:187691..196086- (Clytia hemisphaerica)
TAGCCATCCATCCACCCATTCAATATAGCTATATATATATATTCGATTTG
GGTCATTTTCAAAAGATTTTGGTGCACAGAAGACTAATGGCAGCGATCAA
TAAGTTGAATTTAGAGAACAAGACAAAAGAAGAATTATTTGAAGGTTTGA
ATTTTTTATATTAAGTTTAGAGTTATATATATAACATAACTGTCACTCCC
CATTCTTTGGAAAGAAGCTCTTACAGTAACTTGCTTTGAAACATTCATAG
TGTCCTCCTGGGTTGGTTCCCCCCACTAAAAATCAAAATTTTTCTCCATT
CCCCCCTCTTTTATTTCCCCCACCATATTTCAAAATTTTTCGGTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGAGGACACTATGACATTTC
AAACAAACTTTATTTTATATGATGATTTTTTGCAAATTCAGGATGTGTTT
TATTTACAATTTAATGTATTTCATTCTCAGTTTAACCTCAGACTCAAATG
GCATGCAGATTAATTTGGGCGATTATATCTCTTATTTACATTTAAAGATT
TTTGTGAACTGAAGCTACATATGTTTTGGGGCAATATTTTGCCTCTTGCA
GTGGACTGTTTAAAGTTGATTATTCTTAAATAATGATAAGTGTATTGGTT
TATATGTGTGACATGATATTTTACTAGGTAGTGAAATTAAAATTTGTGGA
TTTTGTAAGTTTAAGTCTGTTTTGCTTATACATTTTTCAATAATGACCCA
GAATGGCCAGAATTGTTTAGGTTCGGAGGAAATAGTTGTTACCCAGAATT
TATAATAACACCCTTCCTATCTTTCGTTTTCTTATCTCTGAAAATAATAT
ACTTTCATTTGCTTTTCCCCAGAGTATTTAAAATTGTCATCATTACATCC
TGTTTCAAAACCTTAGCATTATGAAGCCCTGTTCAAATTGATACGTTAAT
AATGGTTAGTCCCCTGTCTTAATTTTTTGAATAAGACTTAATCTTTTTAA
ATTATTCTTTGTTCAATCTTTGATTTGTATGACAAAGAGCCCAAGTTTGG
GGTTCTAAATACGAAGTTATGCATTACGTACGATTCTATTGACAGTAAAA
CTAAAATGGACGTACAAGAAATTAAATCAGTACTGATGGTGTTATTCAAT
GTTGGGTAAAATGCAAAATATCAAGCAAAATTTGATGTTTAAATTTGTGA
AAGGTTTGGTTATTATCATTTGGTAGTGAAAAGTATCTACTGTAAAATTG
TCTATCATTTGCACTCCTGTTCAAAAAATAGGAGATAAAAAAATTAGCAG
GGAAACAAACTCAAACTGTTCTAGTTCACTTTCATATTCTTTTACTGTCC
AAGGATGTGTATAATACAATTCAACATGTTCCGGAAGAGTGTTATTTATA
TACAATCACCACTTATACAAAACAAAACACCGACGGAGAATGTTATTCAA
AAAATGTAAAAACTTGTTTACCTCAACACAACAAAATGATTTGGAACTAT
TGCCTATTGAAAGAAGGGTTCATAATTCCTTTGCCATTCTTTTAAAAAGT
AATTTCCCGTTCCCTTTAAAAAAGCTAAGCTACACCTTGTGATGTACCTG
ATTTACTTTAAAAGCCTACTCAGAAGGTATTCTTTTCCAATTTAGCAATA
TGGTTTAACCAAATTTATCCGACGATCAAGCCAAAAATATTAGGTAAAGT
GTATGCCCAACGTAGAAAGAAACTTGGCAATATCAAAATCAAACAACTGG
TAAGTTTTAAACGTGCAAATCATTTTCGGAATTTTTAGAAAGTTGGGAAA
ATGTTAATTGTGAGTGCTTCGTCAGTGTTTATTAATTTGCAATACAACAT
AATATCTCTTAAATAATAATGAAGGAATGAAAATTTATCTGGGCCATCGT
TTTCCAATGACTTACTTACCTGTTTTGTTAAAAAGTCTATTCGCTTTCTT
TAATTAGGTCTTGTTTTTTTTTTAATTAGAAAAAATTTAAAACACTCATT
GATGAAAGCTCTAACGTCGATATTGCTTTAAAAGCACTTGGAGAAGATTT
ATCAAATCGATTCAAGGTCAATTGTTATTCTTCAAGTTGCCTAAGTTTGT
CAGAATTTGCTTAAAAAGTTCATAATTTTTATTTCTGCAACAAACAAAAA
AAACATGACGATTTCAACAAATTAAAATCTCGTGTTTCCGATACCGTCGT
TGAAAAAAATTTTCCTTTTAAATTTATTACCAGTCTCCTTAAAAGTTGAC
CACATCGCTAAAGGTTGATAGCTACATTGTTACTTTTTCGAAGCGGGCTA
CGCGGCTTTTTGCGCAATGCAATTGGTTCTTTTCGCATGACGACGGGCTT
ACACTGGCCAGAGTTGCCCGTCGTTAGGAAAATTCATTGTAACGTCAAGG
AAAATGAATAATGCGTTGACATAATTTCTCTCATTTTTTATTTCTGACGT
CAGAAATTATAACAATTTTTTATCTCTTTTCGCTTGATTTTCGCTTTATT
TCGCTATTTTTCTGATTAAAGCGCTAAAAAATCAATAGAAACTGAAGGAA
ACGGTTAACAAATACAATAATGACCGGTTAGTGAGGGCTGTACTGAGAAA
TATTACCCGAGGTCAAGTAACGACCAAGCTAAGTGAATTTTTTAATATTC
TTTATTATAGGTTACTTTAACTTTAGAAGTGGATAAACTTGATTTAACTA
AAGATGCAAACCAGAAGGTACACAGGAACAATGTTCATTCTAGAATACTT
TTATTCTTACCCATTCATTTGCAATTTTTCAATTAAAAATCCTAAAAAGA
TTTAAATAATTTTTAATAAATTTGAAAGAATTTAATAGAAAATTTTCACA
TCTACAACATTTTACTGCCATAAAATTCACCTTAAAAAGTAATACTTCAG
CTTGGAAAATCTTCTTTGTCCTTTTAAGTCGACTGACCACCAAATAAGTG
AGGATAACACAAGTGAGACTGACGCAGAAGATTCAATAGACAAAGAAAAC
GAAGAAACAAAGGTTTTCAGTATTCTTAAAGCTCTTGTTAGCTCGGCAAG
GGCTATCATATAGAAGCAATTTTTTTTATTTTTGATGACTTTCAAAAGGT
ATTCTACAGTAATAAAGACAGCAGAGTAGTATACAGTACATAATACGATA
TTCATAAAAGATTGATCTTTTATCTTTTCCATCCTTTTAAGACGACTGAG
CACCAAATAAGTGACGATAATGCAAGTGAANATTTTTTCATTTTTGATGA
CTTTCAAAAGGTAATAAAGACAGTAGAGTAGTATACAGTACATAATACGA
TATTCATAAAAGATTGATCTTTTATCTTTTCCATCCTTTTAAGACGACTG
AGCACCAAATAAGTGACGATAATGCAAGTGAAATATACGCAGAAGATTCA
AGTGAAGAAATAGAAAAGACAGAGGTTTTTACTCAAATTATAATGATTTC
CTTTCTTTCTTTTTAATTTCAATAATCCTTATAAAAACTCAAAAACCCAC
TAAAAACAAAAAACAAGAGTGCAAGATTTGCAATACAATCCGAACAGTAT
CTCAAACTTAATTCCTTTTGAAATTTTATTAGACTGGGACTCGAAAAAGA
TTCAAATTCACATTGAAGGAAGAAACGCCAATAGACACCAAAGTCAGGCG
GATAGAACGACTAAAAAGAATAAATGGACAGCAAGCGAATACAATTGAGC
AACTGAAAGAGAAAAATGCATCTCTAACCCTTCGAAACGCTGCCTTCACC
CGTTTGAAGATAATAGAACAGCTAGGAGAAAGGCGCTCTACTTTAATGGT
AGACGCCTCACTTTTTTCTAATACTTTCCATGCTGGTGATGCCATATTAC
AACAAGAAGATTCCGATTTGCTCGACCCCTCCACTTTTGAAGGGTTGGAA
GGAAAGATGTTGATTCCTGGTCTGTTTTGCTTTGCCAAAAAAGTCACTCT
CTCCAACGGAGAATCTGTTGTGCTGAAAACACATAAGCCAGAGAGTTTCG
GTCTTCAGAGCTTAGCCGTCCTAAGTCACGAACATCGTCTCCTAAAGTTT
GTTGGAAGCCACGCAAATTTGGTTTCGACAGTTGGTTTGGTCCCCACAAA
CGGGATATTTGCTCATGTCATGAAATTTGAGTATGGCATGAGTCTCTTTG
AAATGTCACAAAAATCTATTTCCATAATTTCTATCTCAAATTTCAAATCC
ATCATCGAGGGAGTCGCTGATGGACTAAATTTTTTGTTTGATAAAGGGGT
CATCCATAACCATCTTATTACTGACAACGTTATTGTTAGAGATGGTTCCC
CTAGAATTGTTGGGTTTACGTTTTCATGCAGGGTGTATTCCACCAAAAAC
AATGTACAAGAAGTCTTAAAAAAGTTCCAGGGTTCAAATCATTTGGCTCC
CGAACTATACAACGGGTCTTGTGCTAGTTATTCGACTGATGTTTATGCGT
TTGGTGTGCTAGTACAAAGCATCTTAAAAATGAGATTCGGCTTTACAATG
AACACAACCTTCAAGTCAAGAGTTGACTGTTATGCTGACAGCTGTCTGTA
TACGGCAGACCTAAGGCCACCGCACAAGTTTCTGGCTTCGAAAACAAAAC
GAATGCTATATTACAAAATTTAATATTAGATATGTATTTTCCTGATTCCT
TCTTAAGGCTATAAGTAGTAATTCATCATTCCTGCATAACTCGAAAATTT
TCTTGAGAAAATGTTGCTACCTTTTTTAGATCCCTGCTGTTTCATGTTCT
ATTATTAGAAACAATGCAGATTTATAAAAGATGAACAATTAATGTTTCAA
ATAGTAATAGTTATGGTACATGATGTATTTTTCGAGTTTAGATTTTCGTC
ATATTTTCCGAGCCTTTAAGAAAGTTTTGGCGCGTTTTTAGCCAATCAAA
TTGCTAATTGGCGATAAATTGAGGTAGTTAGTCTGATTCAGTTCATAGGG
AACAATAGTTTCTCATTTTCTTCGAAATTTTCAGGCCTAAATGCTCCTTT
TTTTAGGCAATAATGACAAGTACCATAACGACCATAGTACTTTTTGAAAT
TCAAGCTTAAAATTTATATGCTTCGAGGAAATTTATCATGTACTTTTATA
ATTTTGTTTCTGCTCCGTTGAAGATAAACTGTTTCATTTTAACGATAATG
AGGGTTTCTGACTAATACCTAGATTTTTGAACTTGGAAGACCTTTTTAGG
GTTTCGACTCTACTTTTGTTCGTATTTTTTGACGAGATTTGATTATTCAA
ATCTTTTTAATTTAGTGGATTTTTTTGTGCTACGTTTCTCTTCATCTGAA
AATATTCTATAAATATGATAATTATTCCTATTTGGACCATTTGAAGTGAA
CTTTTCGTAATGAAAAAATTGGAAAAGATTTTCTCAAAAATTTAAGTGAC
TGCAAAACCTGTGATGAAATCTTTAATTTTTAAAATCCTCTATTTTTAGT
GCATTATTGGAAAAAGGTTTTTAAGAAACAAAACGAATCATCAGCCCGAA
CAAGTTGAAGTTATGCAAATTTCTGTTCGACAGAGCCGACCGATAATAAT
CGATTTATATGCAGTTCTATCAAAAATTGTGTAAGTTGAATTACTTGGGA
CTCTATTGGCATTATTTTCTCTATTTTCATATAATATCCTAATTTTAAGG
ACATCATGCTAAAAGATTCTAAACAACAATATAATTCGATAGTAGAAAAT
TAATTTGGATATTTTCTTTCTATAGGTGATTGCTAATTAAAAACAACCAG
TTGTATTTTCATTTCTTCAGCCTTCTGGGATCCGAAAGAAATCCGGTTGG
CTTTATGTGCTGGTACTAACAAACTGTATATGTGGTCGTTAGCTGGTTGT
TTGGTTGTTGAGGTGCCTGGTGAAGGTCAGTGTGCTTGTATTAATTATAT
TAAGAGATCCCGTCCCATTACCAAGGTCATCTGCTAATATCATTATAATA
TATTGAAACATCCTTTGTAACATATAGTCAACAATTACTGTCAAAATCTG
AAGTTACTCGGTTTGATTCAAGGTAACGTGGGTTTTACGCCGGCCCTTAT
TACGCTATCGACGAAAAAATGCGAATTTCCTCAGGATTTTATCAGGAGGC
TAGGGTCCATCTTTGTTTTTAACATAGATAATTGCTTCCTTGGCACTCGA
TGAATATGGATATACCTTANAATAGATGGATCCATCTTTGTTTTTAACAT
GAATAATTGCTTCCTTGGCACTCGATGAATATGGATATACCTGAGTACCC
AGTATATTTTCAAGTTCAGCTCATTTAGAGGTGAGAAGGTTTGTGAAGGG
TGCTTTTTGGCTTTTTCTTCTCCGCAAAATCTAGCATTAATTATTTCCAT
TCTCGTTCTTTCTTAGGGATTCAATGCTCGAAAAGCTTCAAAACCTAGAA
TTCTGGAGTTTTTTAATTCGAAACAATCTTAATGGCAAAAGTGGATGTAA
TATCATTAATTTGATAGTTCGAGTATTTAATCTTAGCTTAAAGCTATGAT
TTTGAGAGAAAACATAAACTTTCTTGGGTTGAGCTGCGATATCTGTTGTT
GATAAATTAAACTAATAGATTGTAGTACGCATTGTTTGTGATGGAATATT
TTCATTTTTACGACAAATTCTCATCTTTACGGCTTTCTTTCTTCGAATTT
GTTATTATAGCCGTCGAGTATATAGAGTACAATCTTATAATGTCTTATTT
CATCGAATTCGGTCCTCAAAACAAAATTTACATCTTTACGGCTTTCTTTC
CTCGAATTTCTTATTGTTGCCGTCGAGTATATCATTTTTACCCATTAACA
TTGGGAAGATTTCCGTGAAATAAAGATTTTCCACGACGACAAATATTTTA
TGAATATATATTTTATATGAACCATACAAGCTTCTAACAAAATTTAGTTT
TAACATGTTAATCAATAGCCCTATTCAATATTCCCTTGTTGTACAAATCC
CACGTCATGAATAATCAAAGGAAAAAGAAATTGAACTCAAAATACAACCT
TGTGAATATACACAATAAAAATATTTTACTCATAGTTGTGCTTCGACTCG
ATGCTTTTTTCCCGGACACCCTTTATATATAGAAAGTAAAGTCCTTCATA
TGTCAGAGTATACCAAATTTGTAAACGCAAAAGTAGGCAAAACAATCATA
CTTTGACAGGCGTATAAGTATCGACTTAAAAAATCATGTTTAAAAAATCA
GTACATAACACTTTGTTCATAATCTGTCTCATTTTATTAAGTAATAAAAT
TAATTTAGATATTTTCTTTGTCAAAATATTTTTAGTGATATATTTATATT
ATCTAGTGTTTTTATCCCTTTATCTCCCATTGATTTCTTGATTATATTGT
ATTAAAAAAAAATTAATAAGAAAAAAGTTACGAATCTCTAGTTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026803TCONS_00026803Clytia hemisphaericatranscript
TCONS_00026802TCONS_00026802Clytia hemisphaericatranscript
TCONS_00026801TCONS_00026801Clytia hemisphaericatranscript
TCONS_00026800TCONS_00026800Clytia hemisphaericatranscript
TCONS_00026799TCONS_00026799Clytia hemisphaericatranscript
TCONS_00026798TCONS_00026798Clytia hemisphaericatranscript
TCONS_00026797TCONS_00026797Clytia hemisphaericatranscript
TCONS_00026796TCONS_00026796Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026801-proteinTCONS_00026801-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:187691..196086 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.3	4.57	2.05	1.82	41.36	34.74	22.49	24.32	23.12	22.42	15.45	16.38	8.87	9.13	17.99	15.61	21.87	16.68	12.08	11.82	15.79	19.3	12.46	11.89	4.35	6.03	20.53	11.56	10.15	7.27