XLOC_015118 (gene) - C. hemisphaerica

Overview
NameXLOC_015118
Unique NameXLOC_015118
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000596:117234..123581-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015118 ID=XLOC_015118|Name=XLOC_015118|organism=Clytia hemisphaerica|type=gene|length=6348bp|location=Sequence derived from alignment at sc0000596:117234..123581- (Clytia hemisphaerica)
ATGGAGTGTTTTGGTCAATTTTGATATGTAGATGAGAAGAGTGTGCCAGT CTATGCCCTTGTGTGTCTGTTGTCAGTCTGTCTACATCTTCTTTTTTTTA TCTCGTTTTTTTAATGTTCTCGTAATTATTATTTTAGATCTGACATGGAA AAGTTCTTTCGAAAGTGTTGGCTGTAGTCTGAATTTCAGACCTCTTAAAA ACCACAGGTAGTATAATGTCAGCAGCCTAAATGTAACCTGATAACAGCTG TTCATAATTTTCTCACGCGCACGGTAAACCTCTAAAGGCGCTTGAAAATT ATACATCTGAGGAAAATAGTCCTCCCGCGGAAAATTTTACAACAAGAATC TTGTTGTGCGCCAGAAAGTCAAAAACTGATACGGCACCCTATTCATAAAC ACAATCACGCAACTTTGTTGTCATCCCCAGTCCTTTTAGACGAACGCGGT CCTTACGATATCGAGATTGCATATTCGTCAGATTGTATGTTTTCACCCAT CCCTTTAGAGCTTCAGCTAAGTGGGCAGAAAACAATCACAATCTGATCTC AGGTTACCCAAATGTTGACTAAAATCTCTTTCAGATTTTTTGTTTTGAAA ACAAGGGAATGACGTCAATAAACTTAATCATGAAGACCCTGCATTGACGT TTTCTTTCTAACGTCAAAAATATCTTTGAAAATTCAAGAAATTCAAAACA AATTCCTGCCTGGCTTAACCACGTGCCTTGCAAACTACGAGCTCGAAAGA TGCCAAACTTCCTGGGATGTTGCAAAAGCAGTGTAGCGCCAGATATTTCA CTTAACCGTAAGTTATATAACTTTTCTAACGGAAAAAGGCCAAAGCTTCG GGTAGTAGAAAAATGAGCCTCGGAAAGTTGGACTGTTTGCTTCACTCGAC ACAGACAAAGCGGAAATTTTTCGGAAAAGTCAGTGGAATTTTACCCCGAA CGACGGTATTGAGTTGACATTTTGTTCTCTTTGATCCTGATACAAACATT TCCTTTATACTGTCGTTTTGCATAAGGTTTCTTTTCCCGCACCAAGACTC CTCTGCCACCTTAAAAGTAACCGTAAAAGAACTAGAACTTAGAGTACTGT AGTTGAGAAATGAGCTTTGGAAAGTTAGGCAGTATCGTAAGTTTTCCGTA CCTTAGAAGAAAACCCTTTCCAATCCCATGCCGGTTACATATATCCCGGA AAAAGTAGCGGATAAATCCCAGGAAAGTGTCGAGAATCTTAGTGTGTAAA TGGGAATTTTATTTTCATTTACTTTTTCAGCTGCACCTAATCCCTTGTTT CTTGGTGAATTTGAGAATCGAGCAAAAGATGCACATGGTGCAAAGGACAA CAAATGGAATTACGTCACCATCACATACGACCGAACAAAAGGTATCCATT TCACTCTATTATCCTTACTGGTGCTGGTGGCATTTTAATTTCTAATGTTC AAAGTTACCGTAACTTGGTCTAATGTTGACATCCCTCTTCTAATCCCGAC ACCCCTTTTGAGAGATAGGAATAGTAGAAAGGTCGGAATCGCTTATGGAA ACTACTGTATATTTCTTTGCTTAGCGACTAAAGAGGAAAAAATATTTTGT CTAACAGTGATTTTGACCATACTATTATTCCTATCTCTAAAACTACATCG CTATTAATAATAGCATCCTATGTTTTAGGTGACATAGATGAAAGTTTAAA AATATATAGAAAGTTCTAAAAAAATGCCAACGGGTGAGCGCTTTTTTAGA CGTAAGATTTTTCATTCTTCTTTTTATACTAATAGGTGTGTACACGTGGA AAAACAAAGCTGGGAAGTCATGGACACTTTACCCAAGTGATCAAATAGAT GAATTGACTGTTGGTACCGATTGTGATTACTACGCATGCGCACAAGGAGG ACCTGGTCATTGGATTGCCAAATTTACATTTTCAGGTGTTTATGGTCCTG GTGATGAAATGTACCATCGAAAAGGTAATTTTATTCATCTACTTGTTCAG TCAAACATTCATCTGTAACGTGTACAACGGTTTGGTTTTTTGTGATGAGG TCTCGTTGAAATCTAGTAAAACATAAGTTATTGTCGTGCGATGGGTCACA TTTTTGGGGCTTATAAGTGAAATCTTTAGTTTAATTTTGTTATTTTTCAT TATATTATATCAAGAGAAATTTAAGGTAATTGACGTCCTAACGTCCTATA TGCATGAGCTGTGATTGTCAAATCCTATTTAAATTCTCAAGAATTTACAG TAGCGTCATGTTCCAAGTTGGAATAAAAATCAGTATCCTTTTTTCTAAAA TGGGAAGAAATATTATCAGGGGTGTCCTAGTGGAAGAAACTGTGATATGA TGGGGTATAATTAATGTGGTTCAAGGATCCCTGTATCATAAGCAACGTAA CGTTTAAATCTTTATNGTATAATTAATGTGGTTCAAGGATCCCTGTATTA TAAGCAACGTAACGTTTACATCTTTAACTTTGCAATAGATGTAACACCAC TTTATACCGGTGATTTTGTGTGTCAAATCTACGAGGTCAAGAATGATTAT CATTACGTCACCATCGTGGAGGACCCTGTACATACGAACTACAAATGGAT GAACAGAGCAGGTTGCCAATGGTCACTAACACCTAAAGGTATTGACCATC AGATGGCAGTCGGGGAAGAATGTGTATATTACCAAGATGGACATCATAAT GTTAAGTACACAGCCAAAGGTGTACACGGACCTGGAAATGAACTTTACTT CAGAAAATGTGAGTAGATATCTCTCTTGCAATGTTGAGCTACACGTTTTT TTATAAGAACATCAAAAATTTTTGAAGCCTAAAAATGTTCTTAAAAAACT GTTCTTATTTATTTTCATCATTTTTTGAGAATTTTTTTCCATTTTCCTAA GAACACAGGTGTTTTAGAGCCCACAAAGCCTTAAAATGTTCTTAACTTGT TCTTAAGATTTTGACCACCAAAGACTTATGTTCTTATATAGTTTGTTCTT ATAAAAAAACGTGTATACAATTTTAATATTGTTACATGGATCACACCAAT TTTGAAAATGTGAAAAATCGCTGTGTTCAAAGCAATTCTATATATTCCTT TTGAAAATTCCACTCAGTGTGTTAACCTTGTTTGTCTTCATTCATTAAGG TGCCGGTGCCATTCTTTGGTACTTCTAGGTACTAACATGATTACCACACC CCCTTCTCACAGATCCACTGGAAAAGTCGTTCCCGGTCGAAAATTATCCT CCAACTTTTGTCTCCACTATGAAAATAATCAAATAAATCAATCCTCACTG CAAAACATTACGCTATATTTCTCATCCCCATTGAAAATTGAAAAGATTGA AATCCCCTGGCATATAAAATATTGAAATACCAATCCCCATCGAGTTTCAG TCCGTTATTTTTATCCCCACCGGCTGAAAAAATCCTACCGGGTCTGCGAG AAGGGAGTGTGTTACCCTATACACGCTTTTTTTTTTATAAGAATGGTGTA AATCCATTTCATCATGGATATTCTTAACTTTTTGGGGAAAATCATCCTAA AATATTCTTACAGCATTCTTAGTACTTGGGGGTAATTGGCAATTTATAAT TTAAAATGCTCTAAAATTGACATTCTTTGCTTGAAAAGCAAAATTCCATG ATGGTGATATTCTTAGCATATTCTAAATTTTTTGGCCATTTTCATCATGG ACATTCTTATAAAGTGTATTCTTATAAAAAAAAAAGCGTGTATCTTACAC CGAATCTTAGTTCGACTTATTTTTACATGGGTTTGGGCGAAGAAACCTTA TTAAGCTTATGAATCTAAATGTCCCATAAATTTTTCTCATAGGTGGCAGT CCACTTCTGGTAGGCGAATATCAAAACCATTTTTACGATCAGATCGGCAA AAACGATACACATTACGTCACTATTACATACAACATACATGATGATTCTT ACACGTGGTCTAATCGTGCAGGAGAAGAATGGACTTTGTACCCCACTGAG AATTTCAACGTCTTGAAGGTTGGCGAGGATTGCCCGGCGTTCAAAAAAGG TTATGAAGTAACAGAGTTTTGTAGAACCGGTATCTTTGGACCGGGAATGG AATTCTTCGCAAAGTCTGGTGAGTTTGCAAGACCCCTATTTTATTTTCAG TCAAAACAACACCTATCTTTCTTTATCTGAATGTTATTAAAAAGTTTTAT GACTCGATCTTAACAACACCCCTGTCTCACAGCCCCGGTGGAACTTTTTT CTTCAGTGGGGATAAAAATCCCAATCGAAATCTAAATGGGGATAGAAATT TTATTGTTCCAAGGTTCAAAAATCCAGTGGGGATGGTTTTGGAGTGCAAT TTTTAGACATTGATTGTCGAGTGAGTGAATCAAAGTCATTTTTCCAGTGG GGCTGAAATTCCAGGGTATTTTCCAACCGGGGACTAAATTTTTGCCAAAT TTTCCAGTGGGGATGGGGTCTCAGTGGGTCTGTGATACAGGGGTGTTTAA TATCCTATTTTTTGAAGATTTGACGATGATTTATTTTGAAAATGCACGAG TTGTTGTTTTCAACACGTTAAACTCATGGTTGAGACAGGGGTATCTAAAC ACAAACAAAGTTCAAGTGAGTACACCTGTNCACTTCTGGTAGGCGAATAT CAAAACCATTTTTACGATCAGATCGGCAAAAACGATACACATTACGTCAC TATTACATACAACATACATGATGATTCTTACACGTGGACTAATCGTGCAG GAGAAGAATGGACTTTGTACCCCACTGAGAATTTCAACGTCTTGAAGGTT GGCGAGGATTGCCCGGCGTTCAAAAAAGGTTATGAAGTAACAGAGTTTTG TAGAACCGGTATCTTTGGACCGGGAATGGAATTCTTCGCAAAGTCTGGTG AGTTTGCAAGACCCCTATTTTATTTTCAGTCAAAACAACACCTATCTTTC TTTATCTGAATGTTATTAAAAAGTTTTATGACTCGATCTTAACAACACCC CTGTCTCACAGCCCCGGTGGAACTTTTTTCTTCAGTGGGGATAAAAATCC CAATCGAAATCTAAATGGGGATAGAAATTTTATTGTTCCAAGGTTCAAAA ATCCAGTGGGGATGGTTTTGGAGTGCAATTTTTAGACATTGATTGTCGAG TGAGTGAATCAAAGTCATTTTTCCAGTGGGGCTGAAATTCCAGGGTATTT TCCAACCGGGGACTAAATTTTTGCCAAATTTTCCAGTGGGGATGGGGTCT CAGTGGGTCTGTGATACAGGGGTGTTTAATATCCTATTTTTTGAAGATTT GACGATGATTTATTTTGAAAATGCACGAGTTGTTGTTTTCAACACGTTAA ACTCATGGTTGAGACAGGGGTATCTAAACACAAACAAAGTTCAAGTGAGT ACACCTGTCAACCCTTAGCCGCGCAGTCAGGGACTGGTAACGAATAATAC AAGGTAAATTCTTTTAGACGACAGTATCGAAGACACATGCGTAGGAGCAG TTTTGTGAAAATTGTAAGGGTATCTTTACATTGAAGCGATAAAGTAACGT CAATATAGTTGAGGTATTCGAATATGCTAAAATCAGTTTGCACTTCACCA CAGAGGCCCGGGACAATGTCTTTCATATGACATGAATTTTGGCAGAGATT TTCCTGGTTTGTTTTCAGAGTCAGCCTAAAAATGCCGTACGCCGAGCCGC GCCGCTAAGGTTTGATAGGCGTATTTGTAATGTCTTTAGTTTTCTATTGG TCATAACCTCGGGCATAGTTGGCCATCCATAGAATTAAAAATTTCTAAAA CTAAAGAAAGTGAGTTTGAGAAAATAATCTATTTTCTTAGCAGAAGCTTC TGGTTTTTTTAAGACATCAACTGGTTCAAAATTAAGGTCAAATATCTTCT TTTTTCTTCATTTTGGTAGAGTGCAAACCGTGGAACATTGGCAAGTTTGT GCATGAAAAAACAACGGTTCATATTTCATACGATACTTCTGTCCATCGAT ATAAAGTGAAAGTGGGTAAAGAAGTTGGCTTTGTAGATATAACGAATGAC TTTCGAATCTTAAACATTGATAAAGGATGCCCGTTGTTCGTGGAAGGCAA AAATAAACTTCGTATTTCACACAAAGGTATTGACTATGATGGCAAACTGT ATAAGCGAATTTTATAAAATATATTTTTAGGTGATCTTTTATTGTACAAA TTTTTATATTAAAGAAACAAATCTTTGTATTTATCTCATTTGGAAATTTC AATTAAAGTCTGTCTCGATATAATTTGCAGTGGAGACAAAAAAAGGCTGT AACAGATTTTACCCTTCAAGGCCTTCAAGAACGTTCCTTGAACTACCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026921TCONS_00026921Clytia hemisphaericatranscript
TCONS_00026920TCONS_00026920Clytia hemisphaericatranscript
TCONS_00026919TCONS_00026919Clytia hemisphaericatranscript
TCONS_00026918TCONS_00026918Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026918-proteinTCONS_00026918-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000596supercontigsc0000596:117234..123581 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.84 1.92 2.27 2.11 6.63 6.12 6.53 5.85 3.46 5.91 2.75 2.48 1.06 0.94 0.72 0.63 0.65 1.08 0.96 1.2 1.22 1.66 1.94 2.34 182.05 79.72 1 1.16 1.36 1.32