XLOC_015217 (gene) - C. hemisphaerica

Overview
NameXLOC_015217
Unique NameXLOC_015217
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000606:3596..12752+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015217 ID=XLOC_015217|Name=XLOC_015217|organism=Clytia hemisphaerica|type=gene|length=9157bp|location=Sequence derived from alignment at sc0000606:3596..12752+ (Clytia hemisphaerica)
ATGAAATTGTTTAAGTTAAGTAACTTGACGCTTTTGCAGGTTTGATTGCA TAAGTCTGGCAAAGCGCAAGAGAAAAATCACGAAGCCTTGAAAAATACCT GGACAATCCTGACACATTTTGGATAGGTCTGTTGATTTCCAAGTGGCATA TTTTATGAATCTTTTGTTCTAATCATCTGTATCTGTCTTGTTTGTTTGAT GGAGAAATGTAATAACTGAAAGAAACGAAAATTTAGACTGTTAGAACATT TGTTTATGAAAACCTTTGCTAACCAGTCTCATCGGAACTCTTCTCCTTGA ACTGACACTGAATCTCTGGTTGGAAAGTTTCAACCATAAAAAGGTTGTTG ATTTCTTAACCTATCGATTGTGTTTTTTACATGGCTTTATAAAACTCCCT TGGCGCGCGCATTACTTGTGTAATGCCGAAATACCTTCCTGCCTCTTGTC TTATTATTCTGTCATAGCCAATCTATATCTGGCCTTTCAAATATTTAAAG ACCAATTCCGTGTGAAGTCAAGAAAGAATATGTACAGGATGATTTAGTAC CACCTTGATAGCTCTTCAAATATTTCTCGTTCGGCGGACTTGCTAGGGGC GCagtttttggtttgttttttttttcattgcctGGTGAAAAttatgtcag ttaggaacaCATGTAGTTTGCTTGAGGTTAGCTTCAAGGTACCAGGTGAG CTCTTCAAATATTTCTCGTTCGGCGGACCTGCTAGGGGAGCAGTttatgg ttgtttttttttcattgttgaAAATTATGTCAGTTAGGAATATGTAGTTT GCTTGAGGTTAGCTTAAAGGTACCGGGTACGCCACAAAAAACTCTCTTta taaaaactaatttttccgaaatctgaaaattctaaaagaactatagaaag ataaacttaaattttgatgggtcatttattaaattcggttcattagatca aaagttaggctctatttaataaaaaagttactttttgaaagtgctcaaaa acgttaaaaatcaacGTACagtatcaaattaaacagaagcataattacat gatgcatcaTTATTTTCgattaagtcattaaaaatgatcgTTTGTTGTAG AGTCAAGTTACCAGTGCGCGAATtgccccagtgcacgaacgaacatcttt gaacttgaaaaaaacaaccaaaaacaaacttctatagaacttccttcgtg cagcagaatcctcaaactatcCCTAGCAATctgtccaaaaattaaaataa acggagcacttgaacaacaccaaaccgattttgaacgaggccaagtaaaa aaattacaaaactctggatttttgtaaacatggctGATCGCAAgaggaaa tgttttttataagaagatttgcgcaagaagagttctgaaaatgactttcc tcttttaaaaacctgttaTCTTCCATCACATAAAATTTCATCGAAGCATG TTAgctcattaattcaaaatcaatagaaacatatcaccagtagttgatat aaaaaagggTCCAGTCCGCAAATGATCCAaacaccatattcaaaatgaag acattgtaACGTCAAAACATTCCAAAGCTGGtgatctcaattaaaaaaga agacactacattgccgCCATTTTCAATGaccaaaacttgaaaaagaaaac aaaaatggacgacaagaaaatatttacaaaaataaacaggttagtaaAAG GCTAaagctcttataaaaaatacgtttttttagtgaaaaagcgcgtggtt tgaaaagttcaaatctGGGAAGAGAGTTTAAGTATTACCTGTGAGCGgag ctctaattttttctttcaaaagatcgtaCGTTCCCGCTCTGGTTCCTCGT TCGTGGACTGGGTCCGAATAGCGCTTGCTTTAGCAacttattattccaag aagaagctttcaaataaattgaaaacaaactgaaagaaggacttcaagct TGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNctctcgggtacctaatagccgggggg gttggaataagcgggggggttggaaaaaatctcaaaacttaataagcggg ggggttggaataaaaatgtcttgagtggaaaatttttgaaaaggaggcta atacagctgaattaggacaaaaaagggaactttcaaaaacattttcccaa aaattaataagcggggggggttggaataagaatgtcctgggtggaaaatt ttcgaaaaattaattagcggggggacggctattaagtacccgagagtacg agatggtcaaaaaggatttatgtaaaaaccaaaagtaagtgagaaaagtg aaaaatgagttTGGCGTTAGTGCACTGGGCATCCCCCTCtataaaggaag attgaatttcaataaaaggcagaaaatttgtcgaaaaaagctaaaaaaac tggtaaaattcataattaTACACCAAATATGGGTTTCTAGAAGTGTGGCG TAATTAGTTGTGCAATAGAACGTCACGTTCTCCTAACGGTctagacttaa actcctatatcaggattagaaactaggctagtcttacctcttatGTTTGC CTTTGCATCAATACTGTACAATGCCGACACAAGtcgacacaacacattga caaataatccctgtgagaagtttatatcgaaatctgttGCAAAAACGAAT GTGgcctcttctactgattgcttcatGGCGCTACCTTGCGGACTACTGTA TTTATTTGATTTCCACCAATAAGATTGTCACACTTTACACAGCCCTTCTA TTTGGCACCTGTGGTCTTTCAGTGCTATACCCAACAGGGGGCTGTAAAAT CTCACCTTCCATACATAACACCTCTTTTATTTGATTCAATCCGTGATCTT AAGGTGTAGCCTGTTTCTCATCTTTGATTCTCTGAAGAAAGCAGAAATTg gatgcaagagttagattgttaaaacaaagtgccataaaaacTCATTGaat taaaagaagaacttaaaatcttaaaatattttcattttgaagaattggtg ccaaaaagtgaaacatagaaaagttttaatatttattgctttaaaagtga aaatgagggatttggaaaattttttctagGTTTAGTTTTTTGTACAAATG TAACTATGGacaagcaccccgttgctaagatgttagcttgaaattgaaat gaaaccactgaaaactaAAGCAAAATCAGCCCGCACTCCctatcccgtaa tcttgatatatcagtttaagtctatactgcctAAAGGAGTATTACACAAA GTCATGGTAGGCATGGGACTCCAAGGTATAGCTGGAAACTTTTCATTGTG TGCAGGTAGAACTTTTTCAAGGTCTATTTAGCTAGATCTTTTGCTTGATG CAATACCATTCATTAGTATGGATGTCACCCCTAAATTATGCAGTCAAAAT GGTATTGATTCTAGCTTTATTGATTATCTAGGACCTTCAGTTAGTCAAAT AAACTAGGTCTATTGGATAACTTTTAAATAATGAAGTTGTCtaattgttt tgtattttaaaacACAGTTGTTACCTAATGCTGTGTCTGTAACCCgccaa agttttgtaaaaacaGTCTATATGGCAGTACACAGTCTAGGTGGTTGTCC AGCCTAAACATCACTAACTGACTCCTGTAGAATTGCATAATCTTAGTGTC AGGATAAACCTGATAGTGTATCAATTTACTAACTCAATTTTTCATCTTAA TCATTTAATTAATGTCTGCTAGTTATGTTTTAATTTaccttttaaaaaca ttttgatttcTTCAGTCCCTCTTTTTAAAGGTAAATAGTCTTTCTCTTTG ACAGAGGTGAAAAAAATGGTTCCAGATGATGGCACCTATCTAAAAAACAA ATATCTGATATAGGGAATTTACAATTGAAAGCCAGCCTTAGGGGATTAGC TGTCACAGGATTAGAGTAACCTTATTAATATTACActtttatcggcgatc caaaatatctgcaatctgattggttaaaaagagtacaatatttcttgtat tttacatataaaaatataaattgacgaaaaataTGTTgctgcattgtagc ggtagcagtaatctaacgtcactttgctataAAAATACCCTAcacttttt tccaacacaaaaagtgcattacATATTACTAATCAAGTATGTATCTAACA TGGAAAAATGAGTGGGACAATTTATCAATGGGAAAGGCGCGGTTTTTGAA AATAACCTTAGTTCAAATTATGATTAGTGTTAGGTAAGCCATAAATTGTG TTAAATAACTTGTATGAGTATTTATATGAATATCTAGcataataatattt tcaagttaTTTAACGCAATTGGGTtatctaacgttaaatgaaaTTTGAGC CAAGGTATATAAATGTAATAGGTAGGTTCCATAACTTCAAAAATttggtt ttcattttttttcttggtTCTGTTGATTACTTTACCAGGCAGTTTCATAA GTTATTATTTCTTTTCTCATTTTAGATACAAAGACAATGGGTACAATGAA ATATATTAGtgaagaaaagtattgatatatgaCTATTACAATGTATAGCA GCTGGGAGACAATCTATTTccaatacaatgacttcttcCCTGGATTATTC GATCAATTCGAGCAGTATAAATAAAGAAACTTCTAATTTAAAGAATCATT CAAAACTTCTGCAGTTAGGACTCAGTAACTCGAAATTAGAGCAACCTTTG TTGAATGACTTCCTTCGTCGTTTGCACAGATCGAAATTACGACGCCTTTT GTATTGTGAATATAAAAGTGGAGGATTTATTGTTACTGAACAAATACGAG GAGCAGTTGATAGTATTATCTCAACAGATAAAGACAATTCATTGGACTCG AGATTAAAAAGTGTTCCTATGCATCAGGTATTTTTATGTAAATGTGGCTG GTTGCTTTTTAACCCATCTACATTACCATGCGGACACACAATGTGCAAGC ACTGTGCAGATGAGAATCTGTTTTGTATTTACTGTGGCCACACAATAGAT GACGTTAGCTCTCCGAATTTATTTCTGGTTCATCTTCTCAGCACATGGTT CCCTGGTGAATATCAAAGTTCCCAACACAAGCTTGATGCCAAGATATTAC TGGCATCTGAAGATTACGAACTTGCTCTTAACGAAATCGATATTTGCATT TCAATACTTGATGATGATTATTCAGCATTTCAATTACGATCAgaaattta tttgaaacttgaaaattataaaGACGCATTAGTGGATGCAACTAAATCAT GTGAACTAAACTCTGAATGTGGTAAATCTCAGTTCATCAGAGGTAGTTGT TTTTCACATTTAGGCAAGTTAAATGAAGCAATTGACGCATTTCAGTTATG CTTAGAACTGGAACCAGAAGATATGGCATTATGTTCTCTGGTTATTAATA AACTTGATTCAATTCTGTCACTTCCGGATACTGGCTCTAAACTCTCAGAT TCTGATTCTTCATCAGATGAAGGAGTGGGTGGCAAGCGTTCAAAGTTAGA TACATCAACTAATGAAAACACCGAACCGTCATGTCGCCACGCTAGTTCTA GTAGTTCAAATACATCATCCACCACACCTTCAAATACACAGGCTAACAAA TCTTACACTGATAAAATTGATGTCGAAAGAAGGAAAAATGATTGTACTGA AGCTCATACACCAGATACAGACTACAAAAATGATTCAGCTACTAAAACAG AAAATTATGTGTCAAATGTCGAAGAGAAAATTCATGGTGTACCAAAAAAA CTATTATCAGAAGAAGATTTCGAGTGTAAATTATGTTACGAATTACTGTT CAAACCTATTACCACTACGTGCGGTCATGTGTTTTGCAAGAACTGTTTAC TTAGAAGTCTAGATCATAATGTTACTTGCCCTATATGTCGAGTCTCATTG GCTGGTTTTTTGAGTAACCCTTTGAAACCTGTCACTAAGCTTATTGAAGA TATTTTGAGTTTGTTTTTCACCGATGAATTTGGTAAAAGAAGACAAGCGT ACATGAGCCGTATGGAAAGGCTTGCAAGGTAAGAACCTTAGTAGCCTTTA TTTATTACTCCTATTACATCTTCTTTCGTTAATTCACTTCTGTTTTCTTA TAAATCGTTTCAGGTCAGAGAGAAATCTATAAGAGATATATTTTTTACGT AAGATTTTGCGATGAACATatgttttttatgtcaaatacaGAATTTCGAA AGGCACTTGTCAGACTTTCTACTCATtaagttgttgttttttcctaATCG TTTCAATATTGTTGTTGTTCTCTTTTGCAGGGTTGGCAAAGATGAGGAGG TTGAGATTCCGATATTTGTGTGTTCAATTGCTTTTCCTTCGGTCAAATGT CCGTTACATATTTTCGAACCTAAATGTCGATTAATGATACGTGAATGCAT CGAGTCCGGCTCCAGGAAGTTCGGGATGTGTGTCCCTCAGGGTGACGATG GTTTNAGTCCGGCTCCAGGAAGTTTGGGATGTGTGTCCCTCAGGGTGACG ATGGTTTCTCTGAAATGGGTAAAAgcaagattttcattttctcaaTACGT ACCACTATATTTTACAATGGATTgattcttagttttttttcacaagATTT TAGTTTCAACTACAGTATGTCAAACAAAAGATCGTCTCgtaaatatctta aaatttatcACACCATCCctttaataacttttttaatACCATTACTTATT GAACTTTCTCTTCTTTTATTCTAAAGGTACGATATGCGAAATTACCAAGA TACAAAATCTGCCGGATGGACGGTATGTCATAACAGCAACTGCCGGACAG CGCTTTATAATCCAACAGAAAAGCGTTGAAGATTCTATTGACTAtgcaaa agtaaaatatttttgtgatgAGCCAGAAGATTTGAACAATGAAACGTTTA ATGCTGCTTCGAGGCGTGCTTACGATCATTTATCACAGTACATTACGTCA CTCAACGAATCTGAGCAAGATTGTATTATAAATGCATTGGGACCAATACC TCAATATGAAAGTAATTTCTCACACTTTCAACACGGTGTACCTTGGATCT GGTGGGGTCTTGCTGCCTTACCTTTAAACTtttcagcaaaacttgttttg cTAAAGTCAAAATGTGCAAGCGAACGTATGTTGAGTTTGCAAAGATTCTT ACGGTTTTTATCTCGAATGCAATCGACGCCAAACGGTGGACAGCAAAATA ACACACCGATATCTCAACACAACTAAACTTATATATACTATTATACATTG CTTTGtagtttttatataattttgtaCAGAATTAGTaatgtaattatttt caaatattcatcctttcttttttatctttaaaagaTATCACAAACATCAC GCCTAAGGATATCTTAATACAAAACACTAGATGAAGCTTCTATGTCCCta gctgaagcaaaattttgccCATATTTGATAAAATGTCGCCAAAATTTCCT CGCATAAcccttgaaatttagaaatcaTGACAGTGTCAAAATACTTGAGT ATGTAAAACCAAGATTTCTGCTGTGGTCTACTTTTATTAAAGATAGtgca ttgttttttcgcttCACCTGTCCTATCGAGAAATGCCGTGTTGTTTCTAT TTTTTATGGAACTTTgatgtactctcgggtacctaataaccgGGATGGgt agaaaaattctcaaaacttaataagtggactggaataaaaatatcctggg tggaaaattaatTATAATTGAAAAGTTACAAACAcaaattcgaaaatttt gagaatgaTGAAATGTCAACTTTTATCTACTGACGTCGTTATAAATCTAC GAAAATTTTAGTTTGGAAATAATTCTAGTATGATATGGTGCATCCTGTCA AAGTTTTATGATTAACCATGAACAACATAtgcacccctgtgtcacagacc cactgggaccccagccccactggaaaatttggcaaaaaaattatccccga tgggaaaataccctggaattgccgccccactgagaaattcggggaaattt actttgattttataCCCACTCGAAATCCAATGATTTAAAATTGCACtaca aaaccatccccactggattttttaaccttggaataatagaatttctatcc tcgTTGGGctttcaaaaataatatttatccccactgagCGAAAAACTTCC ACCGGGGTTCTGAGATAGGGGTGTACATATGTTCAAGGATGAACCCTTTA ACCTCaagcttttaagatttttgcAGCCAAAGTGAAGTTAAACACAATGT TTTCACCTAGAAAAAAGTCAGTTGAAAACTCTGTAATTAGAGAAAAGTCA GTTGAAAActctcaaaaattatggtgaaaACTCTCTATACTAAAAATAAG CCAGTTGAAAACTCTCAAAAGTTATGGTGAAAACCCTCTtactcaacaaa aaaaattcaacccaAGCGTACAGAGGCGTTATCATTGCGGGGGAGGCTAC CAATACCTCTACCTCCCTTTGTAATTGCCGGCCATCCTGGATGGTACTGT CTGAAACGATATACAAAACTTCAAATTTCGCTCTTGTCGTGCGTGTTTTT GTATATCAGGGTTTATAtgcaattggtttgttttggtcctAATCGGGACT CTTGATTTAGCCTCACTTTCATGCCCCTTTTAAGGCCTCAGATTTTCCAT ATGGgcctttttcagtttttcagtgCAGACTGCTGTTTTTTACTCCGCCT CCCTCCCCAGCATCTTGGTGGAAGCTTTCCTAAGTCCAATTTTATTTAAT GCTTAGGTCACCgaatattctaatatttttcttagattttcttTATGTGA ACCGTTTCTTTTAAGGTCTATACCATGTATTTGCCATTTGCTGGCTTGTT GATTCTATATACCTATTATGTTTTTATTCTGTCGTTATTTACTATTTACT GTGCTCCTgtaatcatttgttttattttcctagtttatattcctgtacat attttgtctgtgccgtTTTTCACAGTGTTTATTCCGTCAAGAGctgaaaa taccatgtagaCATATCTGTGTGCTTTCTGCCTATCCTTGCTTTAGCCTT TTGTGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027072TCONS_00027072Clytia hemisphaericatranscript
TCONS_00027073TCONS_00027073Clytia hemisphaericatranscript
TCONS_00027074TCONS_00027074Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027072-proteinTCONS_00027072-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000606supercontigsc0000606:3596..12752 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.22 24.94 15.18 8.89 11.41 7.4 7.21 8.02 4.76 6.59 7.89 5.25 8.7 8.47 4.68 10.77 7.07 10.69 7.49 8.93 13.79 22.1 29.5 25.65 9.31 10.13 16.53 16.32 23.58 23.36