XLOC_015285 (gene) - C. hemisphaerica

Overview
NameXLOC_015285
Unique NameXLOC_015285
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000608:181447..184793-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015285 ID=XLOC_015285|Name=XLOC_015285|organism=Clytia hemisphaerica|type=gene|length=3347bp|location=Sequence derived from alignment at sc0000608:181447..184793- (Clytia hemisphaerica)
AAAACACTAAAGAAAAATTAAGACAAACATTTTTAATGAATTTTTTTTAA
ATAATTTTAGCATGGCCAGTGTTAGTAAAAATGAGTTTAGATAAAAAGAC
CATCATTTCATCTGTCCTGTTGGTTTTATCAAATTCACTGGCCATTTCTT
CAATTGGCACTCCGTCATGGGTCGAAAATAATTTTGCAGGTACGTATTAT
ATTTTTTGCGAATCATTCTTTAAATTAATTTGGGTAGAATTCATGGTCGT
CCCCGAAAAAATCAAAGAGAGAGTGAGTCGAAAGTACACTGCTTTTAATG
TTGATTTTCTAAATTGTAGTGAGTGAATTATAAGATTTATGTCAAAGTAT
TTTATAGGGCTTTACAATATAAAAATACTAATATGAGTGTAATATTTTTA
ATAAATGATAGATGATTCCATCAAAGAGTGATCGATGATCAGGACCAGAG
CTTCATATCATACAGTGTACAAGAAAAAGCAAAATTTGAATTATAGTACT
TTCAGTTTCATCTTTATCGAATCGTCAGCTATCAAATGAAAAATGACAAT
CTGTGACAATTGCTATGATTTTATGTTGAAAAATTTGGATTGTACACTGT
AATATTTCTACAAATCAAATTTGTCTTTAGGGACAACAAGGCTTGGTTTA
ACGAAAATTTGTGTTCTGTTCAATGGACAAGATCCTCAAAATGAAGAATG
CGAAGCACTCAAAATGCCTTCATACTGGGCTGTCACTCTGATCTTCATTG
TAATTGGTATATGTTTGATTTTCTTGACTGTATTGCTTTTATTATTATCA
ATATGGCGCACACACTCAGAGAAAATGGCTCGCATAATTGGTTTCCTTGC
TAGTAAGTTTATTTTTATTTTTTAGAAGGCTAATACGTAATAGACTGTGT
CAGATTGTTGTTTATGAGGCCTCTAGACATCAGCTTGAAGTCAAATGACT
ACTTTTTATTGGCTAATAACCTCATTTAAAAAAGTGTTATTGTTGTATTT
GATATTACAAGGAAGCTGATGAAATTGTTATGAGTTAAAACATACCTCCA
TGCTCTCCATGCTCTATTAATCATACCATGCTGGGATATTATAAACTAAC
TGTCCCTCAAAGGTTGTCATCTCCTAGGATATCTTATGGGTCTCCAGGTG
CAAATGGCAATTACCTTAAGAGAAGAAATTTTGGCGAGAATAAATTTTGG
CAAATGACCCATTTTTGTTTTAATACTTTAACTGAAAAAAAGAGGGAAAA
AGGGTTTTTAGGAGAAATTTGGCGAGAATTTATTTTGGCGAATGACCTAT
AAATTTTAATTTCTTTTCGCCAAAATTTATTCCCTTAAGGTATTTGGGGT
TAGGAGTTCTTCTCTTAAGGTAATCAGCCTCTCAAAATTATCATCTATTG
TCACATCCAAGGATCTCTTTTGAAGAACGACTTCTTTAAACCAATTTCAA
CTTTTCTTTTCATTTTTAAGTGTTATTCTTTTGTGTGGCTTGTATCGTTT
TCCCTTTTGGCTTTTACATTGAAGAGATTGGTGGACAAGCTTACAAGCTA
CCTGCGTATACACAAGTTGGATATTCTTATTATTTATTCTGCGGAGCTGT
TTCATTGCTCACTGCTGCTGTAACACTATGTAACTTGGATGTCATTAGAG
AAAACTTTAATCACAGAATGAATCGTTAATTCTGGAACATTCTTGTTGTT
GGGTGTGAATCTGGTTATGCACTTTTAGAGGGTTGCTTCATGTCACTGAT
TTTTATGTGTTTATTTTAAATATTGTATAGTTGTTATGTAATCGGGATCG
AACCATCAATGGTACCGTTAATATGCCATGGAAGATTCCAAGCAAAAGTC
GATATCTCTTAATCTATATGCATTGAGGTCATTGAGGAAATGTTCTGTCA
TTGAATCTGGATGTCATCTGAGAAAATATTTTCCATTGAAGGAGATGTTG
ACCCCTGATGTAAAAGCCCGTTTCCGAACAAATTTATTAATTTAAACTTT
TGCTGAGGTATGTGAATTCATGGTAGAAGTTCTAACATTGGGGAAAATGA
GATAATCTTATTAATTATGGTGACGATTTATCAAAGGTTTCAAAATACTG
ATGAAAAAGTCTGCAGACTAAATCCTAATGGGTATAGTATTGATCGTAAA
AAAATGAATTTACTAAACTTTCTTGAAATATGCTATAGAAAATGTATATA
CTAGTATACTGGAGTCAGTAGCAAAAATGTGGTACTGATCACTTAATGAG
CTCAATGTTTATTCACGATAAGTGTTCACCCTTTTTAAATTTCATGTGGA
AACCATGTCAGGTGTAACTGCCTTGAGGGTGGTTTTCACATCGTATTGGG
CTTTTTCCAGAAAGATTTTTTACCCCCACTGTTGAGGATATTGATTTTTC
AAAGTATCGAACCCCCTGGATATCGTATTTTTTACTTGAAAAGACACTTT
ACCCCCTGGATATCCGCTCTTGAACAAAAGTCGTTAACCCCCTGGATATC
CGATATCCTCAACAGGGGGGGCACCGACTATTTCTGGAAAAGCCCATTAA
GAAAGAATAAAAACTTATTATGGACAAACCTAAAAAGAATTAATTGATTA
TTAAAGATAATTTCCGGTTAACTGTTAAAAGACCTCATTAAATTTCTGTT
CTTGAATTATTGTCTTACATAATAGAACGTTTCTCCCAAGGATCAAATTT
TAGATGGGGTCTCGTGCTCTTATAAAACTGTTCTTATAATAAAAAAAAAA
CGTTTAGACGATTTCATTCATAGTAGTCAAGATGAGCTAAATTCCCAATT
CTTTCAGGTATTTTTTGGGGAAATCTAGTTTCGACATTACCGTGAATGAA
AAAGTCACCACCACGACAATTTTTGTGGTTTTTACTCAAATTATTTTTAA
ACGCATTAATTATATGTTTTTGTTCTTTATTTGAAACTATTTACAAAATT
TTTATGTATAAAGTTTTTTGATTCAAGTTTTTCATATTTTTTGTTGAATT
CTCTCTTTTGTAAAAAAACTTTTGGTTAAGATCGAGGGTTTGAAACTATG
AAAGCAATTACAACAGTGGAAGACCGTAGGGACTTGAAATTTATCAAATT
CATATAATTACGATTTGAAAAAGGCTGGTAAAAAATATTTGCAAACTTTG
TTCGTTTTCCTTTAAATTTGCTAGTTTCTTCTTTTTTTTTCAATTTCGTT
GGATATTTTTTATTCCTTTAGGAGATTATACTTTAGTTCCTAGACAATAA
CCACACGATTTTTAATAGCACTGTAAAAAATGATTTGAATTTTTTAAATA
CGGTATGTGTATTTTTAACGCACAAAATTATTAAAAAAAGATTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027185TCONS_00027185Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027185-proteinTCONS_00027185-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000608supercontigsc0000608:181447..184793 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C16orf52uncharacterized protein C16orf52 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07	0.92	3.79	4.37	28.24	20.32	11.74	14.74	10.12	9.77	10.15	10.49	8.5	8.79	1.84	1.92	0.72	1.23	4.37	4.13	2.79	2.9	2.39	2.83	6.04	7.81	11.93	9.86	12.27	11.67