XLOC_015314 (gene) - C. hemisphaerica

Overview
NameXLOC_015314
Unique NameXLOC_015314
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000611:167693..176736-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015314 ID=XLOC_015314|Name=XLOC_015314|organism=Clytia hemisphaerica|type=gene|length=9044bp|location=Sequence derived from alignment at sc0000611:167693..176736- (Clytia hemisphaerica)
CGCCAATTGAATGTATTTTTGTATATCTTTATTCAACTTTAGATAGATAA
TATAAAACAAAAACAATGGCTTGTTTTATACTACACTTATTGTTGTTGTT
TATGTTAAAAATACCACATCAATTTTCTTTGACAATTGGTAAGTCTCGAA
CAAGATTTTTCATTGTTATTTTTCGTGCTAGTAGTCTTATGCTAGTCTTT
AAAAAATGGTTTCCTGTCAACTGGCAACCCTAATCGAAACCTGAAATCCT
TTAAAATATTGTTTTCGAATAATAGATTTTTTTGGTCAGAGTATTGCAAC
TAGAGAATGACTATCACTAGAGGAGCCCCAGAGGAGCTACATCTAGTAAA
ATAGTTTACAAACGAAAACCAAGAATGCTAATCCTTAGACCCAGGGGTAG
AATCTACCACGTTGATGTTCTTTTATGTGCAATTCTGAGAAAATCTTTGA
AACGATTTGAAACTTTTAGACTTTTAATGAAATCTGATTGAGAGTACTTG
TGCAAATTCTTAGGGTCATAGATTGTCTAGATCAGGCATGATGACTTTAT
TGTGAAAACATGACATAAAAACCAGCATAAATCGCTTAACACTCGCAATT
TTAAAATGGTTCTGAAATAATTATCCAATCATATTCAAATTTTGACACGT
GATATGTATCGACAATATGAATTTGAAAATTAAAAAAGAAATTGTTGAAA
TAATGACGTCATCAAATTTTCAAAATATTACTCATCTTCAGCATGGATTT
TAAACAGAAAGCCCTCAGCTGGTCAGGTTTCCCTTTTTACGAGTCACAAA
TTTACTAGTTTTCAAAATGTGTATCTGAAAGTCAACTTTTGGTAATTTTT
GAAAATTTTCTGCGTGATTTTTCGTCAACTCTTAGTCCATTTGGTTAATT
TTCAGGGTAAAAATGGAAAATATTTTTGAATTTATTTTCTGCCAGGGTCC
CAAATTTACCAATTATTCATATCTAACAGGGTCCACTTTTCAAATTCCAA
CGGCACGTCCCCGTCGTCAATGTCAGTGCCCCGGCCCCGGCTCTTTATTG
AATCGACTGCGAAAAACATTTTTTTAAACCATACATTTGGGCTCTTTTCC
GACAAGTGGAACTTTTGTAATGACGTCATCGATTTTTGGATGGAGGTCAT
CAATATTTCTTTCCTTCTGGAATTTTGTGCCATGATAGAGAACACCTGTA
CCGATTTTCGTGTCAATAGCTCTTCTAGATCGATTACAAAAGATGGTAGA
TTCTACCCCTGCTGGGGCTACAAAAATCGAAAAAATCTTTGGATAAATAC
GGTTAGTTGAAAAGAACATTATAAATTTCTTTCCAATTGACGTTCTGATG
ACCTAAAGTAATTTTATCCTTCTTTTACAGACACGTTCGCAAGCTCAACA
ACAGTGCACGTTTCACCGAAAGGGAGAGATGAAGAAAACTGCGGCTGGAT
GCACAAAAAATGTCAAACAATTGATCATGTTTTGAAAGAATCTAAAAGTA
GCAATTTGAAATTGATTTTAGAGAACTCTCAGACTCAAAGTATTGTTTAT
CACACTCAAGGAATGTTACGTCCTGACATTGATTATTTTCAGCTACGAAT
TGCAAAAGAAAACCAAAATGGAACAAACCCGACTATATTTGGAAATGAAT
TACCCTTCATTCAACCCAAAGGTGCTTTTAGTCTATTTATTGATCAGGTC
GACTTTCAGAATGTCATAATTGTTAACTCTATGAATCAAGACTCAAGCAT
GACCATATCTTTTCGAAACTTGAATATTAGGACAGAGTTAACAGGAAATT
TCATATCCACCACCAACACAAACAGCAATCTTAAAGTTACTTTACAATCT
TGTGTTTTGATATCATCGACCAGGAATGCGTGGTTGAAGATATCAATGAA
AAAAGCGACTTCGTTTAAATCAATCATCAAATTAACCAACAACACCATTA
TTCGTGGAGGGGTATTTATAATAAAAAACGTTGATGTACTTGATTTTTCA
CAAACAAAAATACATAATATGGTAACTGATATCTTAAACGAGAACACGGA
TAAATCCTTAGATTTTATGTTATACTTAGAGCATATCAAAAACGCAGTTT
TCCGTGACGAAACAACGATAAAGAGTTCTACATTTAAAAATTTTATGCTT
GCATATGATTCGTTTGTATGGATGCAAAACTTTAACTTTCATGAAACAAA
CGTCGAAAATTTAATTATTAGTCGAGACTCGTCTTTAACAATTAGCAGAT
TTGAATTGCACAATACAACAATAAACGAATGGGCATGCTTTTTATGGAAT
AGCAATTACAATGTAAATGAAGCTCGAGTTGTGGACAGTGTTCTGAAGAT
GCGTCTCGTCAGTTCTCTAATATCGAGTAATGTAACAATTCAAAGCATCG
AATTGCAGAATACAACAGTTTATGGATCTGCATTCTTCGTATCGGAAAGC
ATCTTCAAGGCAAATGAAATCCGAGTGGTTGACTGTGTTATGGAAGAGAC
ATTCTACGTATGGGGAGGCATCTTCAACGCAAATAAAATCCGAATTGTTG
ACTCTACATTACTAGGATTGGTGTATTTAAGAACTAAAAGTAATATCACC
ATAAAATATATATCTATGAACAAGACTGATATAAAAGAAACATTTGTCGC
TTCATATGAATTCAGTAAATCCACGATTACAAATGTAACGATTCACGAAA
GTAGGATTATAGGTAGAATGTTTTACCTTGCAGAAAGAAGTAATATTATA
CTTAAAAATGCAACAATATTTGACACTAAAATCGGTCAAGATATGTTTTA
CTTGTATGAAAGCACGGTAACACTACAGCAATTTATCATTATACGTTGCG
ATATTTATTGCGCTTTTAAAGCAATTGAGAGTGTCAAAAAACTTGGATTA
GGTATTAAGTCGGAGTTTCTCAAAAGTAACCTCACTGTTTTGGATTTCAG
GCTTAATGATAGCCGTCTGCAGGAAAATTTATTCAATCTAAAATATGCAG
ATATTTATTTGGAAGGGATTGAAATTAAAAACAGTTATATAGATAAAAGT
ATATTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTCCTTCTAGATCAGAAGATATAAGCCCTTAAAGTTTGAA
CTAGCAATTTTTAAAAAAAAACTTAGAAAAAAGGACCCTGGCACTCAAAG
GGTTAAACGAGAACACGGATAAATCCTTAGATTTTATGTTATACTTAGAG
CATATCAAAAACGCAGTTTTCCGTGACGAAACAACGATAAAGAGTTCTAC
ATTTAAAAATTTTATGCTTGCATATGATTCGTTTGTATGGATGCAAAACT
TTAACTTTCATGAAACAAACGTCGAAAATTTAATTATTAGTCGAGACTCG
TCTTTAACAATTAGCAGATTTGAATTGCACAATACAACAATAAACGAATG
GGCATGCTTTTTATGGAATAGCAATTACAATGTAAATGAAGCTCGAGTTG
TGGACAGTGTTCTGAAGATGCGTCTCGTCAGTTCTCTAATATCGAGTAAT
GTAACAATTCAAAGCATCGAATTGCAGAATACAACAGTTTATGGATCTGC
ATTCTTCGTATCGGAAAGCATCTTCAAGGCAAATGAAATCCGAGTGGTTG
ACTGTGTTATGGAAGAGACATTCTACGTATGGGGAGGCATCTTCAACGCA
AATAAAATCCGAATTGTTGACTCTACATTACTAGGATTGGTGTATTTAAG
AACTAAAAGTAATATCACCATAAAATATATATCTATGAACAAGACTGATA
TAAAAGAAACATTTGTCGCTTCATATGAATTCAGTAAATCCACGATTACA
AATGTAACGATTCACGAAAGTAGGATTATAGGTAGAATGTTTTACCTTGC
AGAAAGAAGTAATGTTATACTTAAAAATGCAACAATATTTGACACTAAAA
TCGGTCAAGATATGTTTTACTTGTATGAAAGCACGGTAACACTAGAGCAA
TTTATCATCATACGTTGCGATATTTATTGCGCTTTTAAAGCAATTGAGAG
TGTCAAAAAACTTGGATTAGGTATTAAGTCGGAGTTTTTCAAAAGTAACC
TCACTGTTTTGGATTTCAGGCTTAATGATAGCCGTCTGCAGGAAAATTTA
TTCAATCTAAAATATGCAAATATTTATTTGGAAGGGATTGAAATTAAAAA
CAGTTATATAGATAAAAGTATATTGGATATTGAAAAATCTACTGTTAAAC
TTCGAGGATTTAGTTTAATAAACAATACCACTCCAAACTTTGCTATTCAA
ATGAATAGAGTCGAAACTGCTACTTGTGAAAATTTTACCACACATGGAAA
TACTTTTTTAACTTTGATGAGAATTCAATCATCATACTTCAAAATCTCGA
ACTTCAAATCAGTTCGTGATAATACTGAAGGAAAAATAGCTATCTTTGAC
GTTGAATTTTCAGATTTATATTTGACGAACAGTATGTTTACATTAAATTC
CATTGCTATAGGTAGCCAAATAATGAATTCAAAGCAAAGCACCATTTATT
TTACAAAAGTTGACATCGTGCTACCGAAATCATTGTCCGAGGAACTCAAA
GTTTGGAAAATGTTTGGAAAACATCGTGGGAAAATCAAAAACTTTTCAAC
CGTATGCGGAAATCATTTCAACCCTCAAATAAAAAGACTTAAATTATCGA
CAGAAATTGTTTGCAACAGATGTCCATCAGCTCAATACTCAATGTCAATT
GGAAATTTTCTTATAACTTTTTTAGAAAGTATGAGCAAATTGGCAAATAA
AACAAATGCCATTAAACTCAGCAAAATTGCACAGATTGAAAAAGTAACAT
GTAAAATCTGCCCGACAGGTTCTCGCTGTCCAGATAACGAGTTAATAGCA
CGTGACAATTTCCATGGCTTCTATGAAAATAAAACAGCGGATTACCGATT
CCTTTTATGTCCCGAAAGATACTGTTGTTCATCAACTACAAGAAATTGCA
AGTCGCCAACAACTTGCAATCTAAATCGAGAAGGAAGACTTTGTGGCAAA
TGTGAAGAAGGTTACTTCATCAGTTTCTTCAATAATAAATGTATCAACAT
TTCTGAATGTACCAATGGAAGTCAACATTCTTTCTGGACCCTATTTTTCA
CTTCTTTCATCGCTTTGGCTGTGCTGTTAACATTTCTTAAAGATCTCATC
ACTGCAATCAAATGTGCTGGGCCGATAATAATGGCATGTTTATGGTAAGA
AAGGATTAAATATTTGCGTTCAGTAGAGTTCAACGGACACGATAATCACA
AGTTTGTAATATTCGCGCAATTTTGTGATATTTGCGGAGTGTTGTGAATT
TCCAGTTGCACAGTTTTGCGATCAAGAGATTGCACACTTTTGTGATTTTA
AAAAGTATTTGACTTATTTTTACCTTGAGAGATTGGATGAGAGCAGAAAA
TAATCAAATTAAATTTCTAGCCTTGCGAATATACATAGCTGAAAATAATT
ATAATTACCTCCTTTCTTGTGGCGTTGAACCGAGTTAATCCGAGCTTCGA
TTAAGATATTATCACTCCCGATAATATTGAGGATTTCGAATTTTGTTCAT
AAAGAAGCATCAAAATCTAGTACTGTTTTTGCTAGGAAAAGCTCGGATCA
GCTGGCCTAAATTCAGCTTGTTTGTAGTCTTCTGAACTTGTAAGATAAAT
CACACTATATAAGGTCAAATTAAAATATTCTTGTTATACCCTTATCAAGG
TTTCACATTTCCAGAAAAATTAAATTTACTGGTTGCGCCACAGAAAAACG
TTTTTTAACTTTAAAGTAGCTTCACCATCCTGCATAGCCCATGCCTGATA
CGACATTCGCACTTAAAGGGTTAAAGTAGCTTTTCTCGAGCTCTATGGCT
TTTAACAAACTGAATCCTTCTCTAACGGAAAGAAAAACTTCAACTTGAAT
AAGTCATTTATTAAACTTGATCCTTTTCCCCGTATCTGTTCGAGTTGTTA
GGTATCTATATATTTTATACACAAGTATATATTTAAGCCCCCCCATTTAA
AAATTTGGTTCATTTAAGTTAATCCTTCCTCTTTTGAACGCATTAGCGCA
TTAGAGTTTACTCTTCAAGTGTTCGAAAAAAGTGAGGTTAAACTTTTTTG
TGGCACACCCGGTATTGGACAAAAAGTTCTTTCGTAATTATTTAAAAAAA
TTGTAAAAGTACACAAGAGCTCAATTACTAAAGTACGCATAAGAGAATTG
CATATGATGTTATTGTCCGTTACAGTGATAGTAAAGGCAGGAGAATATTA
TACAATACGGCAGTATACGGACAAAATCAGCTGTGAACTATTTTCGAATT
TTCTACCGGTTTTTTAAATAGTGATTTGTAATAGATTATAACATAGTGTA
TATCGCCGTGTCAATTTAAGACAGAATTAAGTCCATTCTATATATTGCGT
TGACCATGACCTCTATGAAACATAAGTGCGCGCTAAAAAATTACAAAACT
GCGTAGAAATTACAAAAGTCGCACATAGCAGTACCTCGAAACCAAAAGAT
AATTTCATTCGTGGGACAAAAGTTCTCTAAATATATATTCTTGTGATTTT
CATTTCAGGAAAACTCGCGCAAAGAAAAAAGAAGAAGATGCCAACGAGAT
CGATGAAATGGAAGAACTACAACCAGGAGACAACCGAAGAAAACGTAAAG
AGATTTCCACATCATCAATCTTCAATATTTTGGTCTCTTTTTTTCAGTTG
AAAGCTTTGATAACAGTTCAGAGCAATGAGAAAACATTAATCGATAAACT
TATGAACATGGATATTGTGGTTAAAAGTAGTGAAGCTTTAGATGCACTCT
GTCCTTTCAGGGGGTTTAATGTTGTATGGCGAGAGGTTTTAAACGGATAC
ACGATTCCATTTTTATTGTTAATGACTATTGCAACTTTACACTTGATTGT
AAAACTCTTGAAACACTTTCGACCATCAAGTTTAAGATTAACATGGTTGA
TAACGAGATTTTGTGTTGGGTATTATATCATCATCGCTTTTTGCTACAAG
AATATCTGCAGAACAGTCTTTATGCTTTTGAACTGCAAAACAATGAATGA
AGTAACATTCTTATACATGGACGGTACTGTTGAATGTTTTTCTTTGTGGC
AGGTGGCAAATATGTTATTCTTGGTATGTTGGGTTGTTCCTTTCCCATTT
GCAGTCGTTTTGGGCTACTACCTCTTTAAAAACAAAAAGATTTCTGTGAC
GACGTTTCTCATATTTTTAATGTTCCCAATGTTTTGTATTGTGAGAACTT
GTTTCTCAAGATGGAAAAGAACTGTCGAGACTGACAGGAGCGATTTCATT
GGCAACAGGCTCGCAGAAATATTCGAAGAGCCCTACAGAGAGAAATTCTT
TTGGTGGGAATCTTGGCGACTTATCGAACGTTTTATTGTTTCTGGCATAG
CAGTATTTCTGACGAACCCTATCTATCGCATTTTATACCTGACCCCCGTC
TTTGCTTCCTTATCGTATTTCCACTTTCGAATGAATCCATATAAACGTTC
GATGTATATTCTAAAAAGATTAGATACGGTTTCCTGGTTTTGTTTATTCA
TTCTTTTGTTCATCAATGGGATGCGAGCTGTTGTTTACATTTATGATGTA
CCTAATATCGATTTTATAAGCCATGCACTAGAAGCTGCTAACATATTGGA
GAATTTATTTTCTCCACTCTGGTATCTTATTATTTCATTCATTCTTAAGA
AGTTGAGTGAAAATCTTTTAAATTTTTAAATTTCATATGATGGAAACTTT
TTTAGCAGTGCTAGCCTTTAAGTATTTTTAAGACAAATACTGATTAGAGC
GTACTCTTAGGTGCCTAATAAACGCCCCCCGCTTGTTTATTTTTTGATTT
CTTTTCCAACCCTGGAAAATTTATAACCTTAGTAGGACCCTCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027235TCONS_00027235Clytia hemisphaericatranscript
TCONS_00027234TCONS_00027234Clytia hemisphaericatranscript
TCONS_00027233TCONS_00027233Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027234-proteinTCONS_00027234-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000611supercontigsc0000611:167693..176736 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.04	0.1	0.08	0.11	0.05	0.11	0.14	0.25	0.23	0.21	0.14	4.58	4.71	0.59	0.54	0.41	0.31	4.62	3.69	0.29	0.33	0.24	0.25	0.1	0.12	0.54	0.11	0.16	0.25