XLOC_015484 (gene) - C. hemisphaerica

Overview
NameXLOC_015484
Unique NameXLOC_015484
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000630:5981..13569+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015484 ID=XLOC_015484|Name=XLOC_015484|organism=Clytia hemisphaerica|type=gene|length=7589bp|location=Sequence derived from alignment at sc0000630:5981..13569+ (Clytia hemisphaerica)
ATCTCCATACAGACTTTCCAGGTAACTTTTTAAGAAGGCTGAATTGCGAA ATTTTTTCCACGCAAAAATGAAACCACATGAGGTTACCAGAGGTCAGGAA TCATGGAGTTGTGTTTTGACTTGATTTCAGGCCAAAAACCATACCTTTCA TTAACCCAATAAATACTGGAACAAAATCATTCTTGAAATGTCAAAATAGC ATCATAGTAGGCAAGGTTTATCTCAAAATATGCTTGGTCATATGTACAGT ATTATCGTTTTTCGCGAAAGAGGTTTTCTACTAAGACCTAGGAAACTTTT TAGAGctcaaaaattgatttataaGGCAAAATCCCTTgacgaaatttaaa aatcatcaaaatctgAAACCAGTTACTTTAATGAGATAAATTTTCGTGAc gattaaatttcgcagattttgcggattttggtgtcatccgcgaaattaaa gcccatggaaatttttaaggtCTAATCCGCGAAATCTTTTGAGCAAAACT CAAGTGATCTCAAATAACTACTTTTAGAATGTCAACTTTTATCAAATAAG CGCTAATTATGCGTATTTCAACATCTAGCATGTACAATTTGGCAGTATAA AGTGCAAGTgcaaaatcataaattttgtcTCATgatgccatccgcgaaat taagtcccttTCTCCAGATAGGTCGAGAAATCTCAACCTACTATTTATCG AGCTATGTTTTGCAAATTTGATCCTTAAAAAGCTTGTAAACGCTCGATGT GTTTCGGAACTCACATCGTGAGCTCACTTGTCTGCATGAATAACGATGAT TCTATGGCCCCCTTGGTGGATCCATCCATTTTGCTCAAATGAGCAATCTC CCTTGGTGGATCCATCCATTTTGCTCAAATGAGCAATCTCCCTCGGTGGA ACCATCAATATTTTGTTCGGATGTCTGCATGAATAACGATGATTCTATGG TCCCCTTGGTGGATCCATCCATTTTGCTCAAATGAGCAATCTCCCTTGGT GGAACCATCAATATTTTGTTCGGATGTCTGCATGAATAACGATGATTCTA TGGTCCCCTTGGTGGATCCATCCATTTTGCTGAAATGAGCAATCTCCCTT GGTGGAACCATCAATATTTTGTTCGGATGTCTGCATGATTACCGATGATT CTATGGTCCCCTTGGAGGATCCATCCATTTTGCTCAAATGAGCAATCTCC CTTGGTGGAACCATCAATATTTTGTTCaaaccactttcactttcgttttc aggtCATCAGTTTGACGAAGTTACGTAAAGAGTACAAAACGTACACATTA AAACGACAGTTGATCTCTTCATATAATATCTTCTTATGTGAAGAAAAGAT TTACCATCTGGTCTGTAAATCTCTCGGAAAAGAATGCTACAAACACAAGA AGTATGATGTCTACTTTTCCCTTTTCAATGTTTTCTATAGAGCGTACAAA TTTCTTTCAGGATTTGTTCCTGGGTCTTCCATGGCACAAAGCATTGTGTT TATTTTCAAAGTGGTAGATCCAAGCTAGCGGTTTTCATAGAAAAGGCTTA TACACGCAGCCGAGGGAGGCTCCCCCGAGCGGGTAGGGGTGCTGAGGTAA AGCAGGCTACGAGTGTACGTGCAAGCTGTAAGGACACCTTTTTAGACCTT TGTTTCGTTCGACGAGCGAGTgtataaaatattcttattagaAAGCCAAA TCAGATAGACCAACGTGCGGGATGTTTCTGAAGGGAAGTGAGTTGGTCTA ATGTAATTTTTCGAATTATCAAGTGCAATTTTATTCATCGAAGAATATTT TATTCATTGAAACATCTGATAACTGTTCatcaaataataaataattaatA AACAAATGAAGAAAGTATGCGCGCTGGCGCTGTGACCAACTCACTTCAGT CCAGAAACATCCCGCACGTTGGTCTATCTGATCTGGCTTTCTGAATATTG ACATTAAAAAACAGCCATACTCTACAGTAGCATTCATTTCTTTTTGGAAT GACCAAagttgtcttctttttttcttggacAGGGAGCCTGAACCAGTTAT GTAgtcattcatttttggaatgaccaaaattgtcttctttttttcttgga cagggagcctgtaccagttatgtagtcatttctttttggaatgaccaaaa ttgtcttctttttttcttgaacagGGAGCCTGCACCAGTTATGTAGTCAT TTCTTTTTGGAATGACCaaaattgtcttctttttttcttggacAGGGAGC CTGTACCGGTTATGTAgtcattcatttttggaatgaccaaaattgtcttc tttttttcttggacagggagcctgtaccagttatgtagtcatttcttttt ggaatgcccaaaattgtcttctttttttcttggacagggagcctgtacca gttatggagtcatttctttttggaatgcccaaaattgtcttctttttttc ttggacagggagcctgtaccagttatggagtcatttctttttggaatgcc caaaattgtcttctttttttcttggacagggagcctgtaccagttatgga gtcatttctttttggaatgcccaaaattgtcttctttttttcttggacag ggagcctgtaccagttatggagtcatttctttttggaatgcccaaaattg tcttctttttttcttggacagggagcctgtaccagttatggagtcatttc tttttggaatgcccaaaattgtcttctttttttcttggacagggagcctg taccagttatggagtcatttctttttggaatgcccaaaattgtcttcttt ttttcttggacagggagcctgtaccagttatggagtcatttctttttgga atgcccaaaattgtcttctttttttcttggacagggagcctgtaccagtt atggagtcatttctttttggaatgcccaaaattgtcttctttttttcttg gacagggagcctgtaccagttatggagtcatttctttttggaatgcccaa aattgtcttctttttttcttggacagggagcctgtaccagttatggagtc atttctttttggaatgcccaaaattgtcttctttttttcttggacaggga gcctgtaccagttatggagtcatttctttttggaatgcccaaaattgtct tctttttttcttggacagggagcctgtaccagttatggagtcatttcttt ttggaatgcccaaaattgtcttctttttttcttggacagggagcctgtac cagttatggagtcatttctttttggaatgcccaaaattgtcttctttttt tcttggacagggagcctgtaccagttatggagtcatttctttttggaatg cccaaaattgtcttctttttttcttggacagggagcctgtaccagttatg gagtcatttctttttggaatgcccaaaattgtcttctttttttcttggac agggagcctgtaccagttatggagtcatttctttttggaatgcccaaaat tgtcttctttttttcttggacagggagcctgtaccagttatggagtcatt tctttttggaatgcccaaaattgtcttctttttttcttggacagggagcc tgtaccagttatggagtcatttctttttggaatgcccaaaattgtcttct ttttttcttggacagggagcctgtaccagttatggagtcatttctttttg gaatgcccaaaattgtcttcttttttcttgaacagggagcctgtaccagt tatgtagtcatttctttttggaatgaccaaaattgtcttcttttttcttg aacAGGGAGCCTGTACCAGTCAGGACGGTAAACAAAGATCTGAAGAAGGA GATCGAGAAATGTCTTTCGAGCACCATGCTTAGAGTTGGACATGGACCAA GCAGGTACGTTGTAATGACACATTTTTAACGTTACTCTTGAAATAATAat acctcgttgaaaagatcATATCCGAAAATAAACTTTTGGATTGGTGGATA ATTCAAGTCAGTGGTATATAcggggtgtcccgaaaaaaagtatcgagtcg taccacttctatagaaagaaagttatCGTGtctgtttcactaaatttgca atgtttatcaaagtttctctttgTGTCAAATtaatcttttatgaataact tttataaaaaacaattctcaataaatttaaacgtcatgaaaattgtaaag aaagttaattaatggagtctgctaaatcgcgtgccacgcgtgccttcgtg ccttggcgtgccttcgtgccttggcgtgccagcgtgccaacgtgccttgg cgtgccatccaaatttggcgtgccaacgtgcctgcgtgccttcgtgcatt ggcgtgccagcgtgcccaCGTGctttggcgtgccaacgtgccttggcgtg ccatccaaatttggcgtgccaacgtgcctgcgtgccttcgtgcattggcg tgccagcgtgcccaCGTGctttggcgtgccaacgtgccttggcgtgccat ccaaatttggcGTTCTATtaaaatttcggcgtgccatccgaatttttgCG TGCCATCCGAATCTCGGCGTGCTTGTGCTATCCgaatttttaccgaaatt tgGGTAAAACTTTGGGGAGAAGATGACATAACTTGGACCCCccccattat ggaccccatTGTGGACCCCACTatggaccccctcaaaattAGCGGGGAAG CATTTTCAAGGTTATTTTATGTAAtaacacttaaattatgtaaataaaat GGCATTATCGCAAAATATGATGTgtatacaccaatttacaaCAAGATGTT TTCTCATGCTCAGTAGGATGCTGGCGGTGCAAATGGATATAGATTGTCat gcaatgaaaacattaaatgctccaagagagctgttttagagatatgaaaa tagtagtacttttattattattttcatttttataagaacatttacataaa tttaaaagttttgaaggaGATACACGTGTTTCTTCCACGCAAAAGGCAGT AGTCTAcatgtcattttcttgacaaagtgacactttttgacaaaattatt gaCATGGCAATTATTTGGGATACCTGCAagctttattacaccaaatattt caattgtaccgaatgagatgcctttgatTTATATAGATAAATATTGGGGT AAAGTAATTTTCAGAAGCCTAACAATTAATGTTTAAGGGCAAAATATAAA Ctctggaaatttaaaaaagtacgccaaaatttggatggcacgccggaata aggatggcacgccggaataaggatggcacgccaaaatttggacgGCGCGC CGGATTTTGgatggcacgttggcacgccgaagcacgaaggcacgcatggc acgctggcacgttggcacgcttaAAAACCGATGGCACgcgtggcacgcga tttagcagactctgattaatgactgttgtaaaaacaattattgtggcaat aaaattcaaatttcttacattttgttaaacacacgcaacaaccttctact cagaatcatgttcgaactcgatactttttttcgggacaccctgtagtagA CTACCCGTGCACAACAGATAGTGTGTAGTGATTATATAATCGCTTTCGCC TTTTCACACGCgtgatttttttgcaaattacCACGCGTGTGATGTGCACG TGAATCATAAACTTCACAATCACGAAATTTTAACACGCTTCAACACGCGT GTGATttggacaagctggagtttttacaagctcttatttcatttggttgg tcgttaagatgtaataaaagaatcttattactttttctaaagaacgcgtc atctctatcactttaaatgaccaattagtgaagtatcttgtgaAAACTCC AGCTCACCCCTTGTGATTTGGTTTTTCTTTTGGTGTAAAAGATCTGAGAA GTGTGATCTGGTGTGACCACGTGTTATCATAGAAAGTGACGTCATTGGCT ACCATGGCAACCAATATAAAAGTTTGAAAGTTTGGAAAAAATTTACACCA ATCGAAAGACCACGAAAAACTAAAATGGTGATAataatgacgtcaatttt aaaaagtgcttgaaatttGAGGCCTGTTTTTTGCGGCACAACAGTCTTCA CTGATAACTGTCAATACTTTATCAGAATCTTTTTTTTAGCATGTTTTATG ATCTGAGTATACAATTCAAAAGTTTACTTTTAATTACCTCAAGcggggaa ctaatttttgctttttaaacAATCTTTAATANTTTTAATTACCTCAAGcg gggaactaatttttgctttaaacaatctttaatatttttgtttttgtttt cgtttttgtttCAGTTCCATTTTGGTGGGTCAATTGAATGAGCACAAGGA AAAACAAATGGTTGAAAATTTGTTGCATGCCATGCGAATCGTCGGTCAGA AGGTACCAGGCAAGTGGAACAACATCAAATCTATGTATCTCAAAACATCG ACTTCAGTTGCTCTTCCTTTGTACCAAGCGTCACCCGTTGCAACCCACGA TCTTAGTGACGTCAAAGTCGACGTCGAAGAGAAGCAACGCAAGCGTAAAC GTAAAGCGACGCCGTCCATCAAAAATACCAACCTCGATGAAGTTAAGAGC GATGATGAAGGACAAAATGAGGACCAGAATGATAAAACGGAAGACGTTGT ATTGGACGGTGAGAAGGAAAAAGAAGTCACTACATTGGCAAATGAAGACA TCGAAGAAACTAATCCTGCTGTCGAGGAACAGAAGACAGTTGTTGCCAAA AACGAAAAACATCTGAGATCTTCCAAAGTCAAGAAAGCGAAAgtcgaaga agaaaaagaagtagGAAAACTCGTCAAAAAGAGAAAGGTGAAGAAAGTTA CTACACTatcagaagaagaagaaatcgaGAGTGTTCCGAAAACAAAAAAG ACACCCAAGAAAACACTACCTGCCAAAAAGACTGGCCCAAGGAAAGTCAA ATCTAAGTAGACACTATATTAAGAATAGCAGTGGACGATATTTTTATTAT GTAGCCTGATATAGCATATGATCGTACTTTTTCAGCCTCAGACTTTCCTT CTAATACAATAAGAGAGCaatccattgagtttcaagcccgaagggctaga ggcgagactcctggatgggaaatgaaaccacttatttcctatccagaacg cccgcgcgtagtttttacacaaacgccggattgaaactaaaatccatcgt taaatttcaaaaatgtagtcctccaaaacaaaggaaccgctaaatgcaat ccgtcgtcatgattacggagcgttctatgcgcgttttggatgggaaataa gaagcttcaatttctcttgccttgGAAAGGTTAAAGTTTTGCCTCTAGCC CTtggggcttgaaactcaatggagaAACcctaaatttgcaatttttctac agtGTAATAATAGGCTTATTTCACTTTTTGTAGAAGAtgagattttatca aaaattttatcatatttatgGGAtctgtattttttaaaaatgaagaagta gTTCTATTGTCTCGTCATAGTAATATGGTTTGAATGTTTACTTTCTTGCT ATACTGTTTATGGGTGTTCTCACACCCGAGGAGAGGGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027479TCONS_00027479Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027479-proteinTCONS_00027479-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000630supercontigsc0000630:5981..13569 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.5 29.58 11.54 10.29 71.94 59.32 54.04 58.92 43.76 48.28 53.26 61.3 88.67 103.01 61.2 62.69 46 46.8 14.34 19.01 52.55 54.2 52.21 46.98 65.54 77.71 22.34 29.93 32.34 33.66