XLOC_015850 (gene) - C. hemisphaerica

Overview
NameXLOC_015850
Unique NameXLOC_015850
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000661:39697..43798+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015850 ID=XLOC_015850|Name=XLOC_015850|organism=Clytia hemisphaerica|type=gene|length=4102bp|location=Sequence derived from alignment at sc0000661:39697..43798+ (Clytia hemisphaerica)
taaaggttttatttttacataagtgttcccgtttcatatcagacacatat ttcatatNGAAGCAATTTGAAACGGAAATGAAAAACAATGACGATTTTAA GGTAGCTGAGGCGCAAAAGATCAAAATTGGAAGAAGACAAAAAGATAGTT TCATGTTACGTGATAATATAACTTTTCAATGTCCTGTGTGTTCTTTGGAG GTTGCACGTCTAAGGGAGCATATGGAACAGAACCATAAAATGAAAAGACA GGACTGTGTGCATGAAGAAACAAGACAACTCCGTGTCAGGTTTTGCCAGG AAAGTCACGACGGTGTGCATAGGGTCTTACCCTGCTGTGAATGTAACACG TGGCTTTGCGATAGTGTTTTTAAGAAACATATGAAGAAGGTTCACCACAA GGGTGACAGTgatattttaacaattttaaatGACAAAGCTTTTGTTAAAT CTAAATTAATGGATAAATTTGGAAATATTCTTGATCCCTCAAAACGATTG GTTGAGAAAGCGGTTTCAGAAACATTATCTACCACCCTCAGAAAAGTTGA AGATTCTAATCTTCAGACAGCTAGAAAAGttttatcaaaatcttcaaatc ttTCAATCAAGACTGAAATTTCTACTAAATCTGCTGCTGCTCCTGCTATA AAGACTAATTATAAAGATAATGGAGTGAGATCTGTAAGAGTTCCCTTGAG AACTAAATCCGATGTCGGTGAGCTCACGTGTACTTACAGATTTTTCGGCG TTGATAATTTTGTACCGAAGAATATACCTACCGTTCCTTTAAGTTCAGCT ATTGTTCTGCAAAATAATCATTCTGTTCGGAACACATTCATTATTCCGAA AACTGTATCAACTGTTTTGCAAAATAAACCTTCTGCTCCGAGAAATATTC CAACTGTTCCGCAGAATACAACTTCGATTCCGAGAAATATACCAATTGTT TCGCAAAATACAACTGTTCCAAAAAACATTCCAACTGTTTCGCAAAATAC AACTGTTCTGAAAAATATTCCAACTGTTCCGCAGGATGCAGCTGTTCCAA GAAGTATTCCAACTGTTTCGCAAAATACAACTGTTCTGAAAAATATTCCA ACTGTTCCGCAGGATACCGCTTCTATTCCGATAAATATTCTAACTGCTTC ACAGAATACACCTGTTCCAAGAAATGTACCAACTGTTCTGCAAAATAAAC CTGTTCCGAGAAATATTCCAACTGTTCCGCAGAATACAGCTTCACAGAAT ACACCTGTTCCAAGAAATGTGCCAACTGTTCCGCAGGATGCAGCTGTTCC AAGAAGTATTCCAACTGTTTCGCAGAATACAGCTTCTATTCCGAGAAATA TTCCAACTGTTCCACAGAATACACCtgttccaagaaatatttcaacTGTT CCACAGAATACACCTGTTCCAAGAAATGTACCAATTGTTCCGCAGAATAG ACCTGTTCCGAGAAATATTCAAACTGTTCTTCAGAATACAGCTTCTATTC CGAGAAATATTCCAACTGTTCCACAGAAAACACCTGTTCCGAGAAATATA CAAACTGCTCCACAGAATACACCTGTTCCGAGAAATATTCCAACTGTTCC GCAGAATACAACTTCGATTCCGAGAAATATACAAACTGCTCCACAGAATA CACCTGTTCCGAGAAATATTCCAACTGTTCCGCAAAGTACACCTTTTTCA AGAAATATTCCAACTGTTCTGCAAAGTACAcctttttcaagaattattcc AACTGTTCCGCAAAGTACACctttttcaagaagtatttcaacTGTTCCGC AAAGTACACCTTTTTCAAGAAGTATACCAATAGTTCCGCAAAATACACCT ACTGTTCCAAAGATTATTCCATTTATCACGAAAAGTACGACATCTCCCAA ATTGATGGAATCTGTCccaaaaaatgtaatttcaGTTTTACAAAAAACAC CTGATCCAAAAGATAGGAATTCTTCAACGAAGGGCCGCTGCAGCATCATT AAAACAGAAGCTTCTGACGATAAATTACCTAATGCCAATTCTGAAACTTC TATTCAAGATAATCATCAAAATGTCGGACTGTGcgacggtaaaaacagta taaaAAGGAAGATATCAATTACTGGCGGTGAAATTCTTGTAAAGAAACCT AAAAAGAAACCAGACATTGGGTCGAGCTCACAAGCCTCAAAGGAAGTGAA ATCCGAGTCGAATGTGATCTTTAAAGTAAGTGTTCTTCTTTTAGACCCCT GGATGTCGATCCTACCTATTCTTAATTGAGTTACAATGTACCTGACAGTT TTATCCTTTATGTATATTTATCCTTCTTTTAATCTTTTGGCAATTTTAAG ATATGAAAGAATGATCCAATTTTGTTGGTTTTACCATGTCCATGGTTTTA CACGTTTTCTAAATGATTTTGTATTTGGGTATATTTGGAAAGCTGATGAT CGGCAACACTCGATTGATGTTTCAGTGTTTATTTTGCGCAAATGAAAGGG AGGAGTTCTATTTCTTAATGGGTTCttccagaagaaaaaaaagaatatgg GGAGCGGAAGATACaacattttctggaaatttaccTTCCCCcaacattgt gacttttgacccacCGGACAGTAggtctaccccccccccccNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGAACAAGCAGCAGTTG ACCCCGAGCATTTAAAACTACCCCCACCAAGCTAGTCTGAATcccagacc tctacaaaaccccaggtagtatagtatagtctataaggagcacgaatcag ttagtggatgccagcagcctaccaCCAAGCAGGAAAAGTTTATCCGTTTA CCCCCGGCAATATCTCCTCCACCTCTTCCCATGTACGatcattttctgga agagcccaatcaaACTTGAATGATTGTATTTCGTTTTTCGTTGCTATAGG AATTTGTGCATGACGTACAACATTTGGCTACGATGACAAAATTATTCATC AGGTGAGTATTCATTTCTCTGTTGGTTTGAAAATGTTGCTCGATTGTCCT TCATTAGCCCTTTTAGCAGCTTCAGTATCAGTCTCCTTTTCAAATATTCT ACTAATTCTAACTCGACTGGCTATTATTTTAATGATAAGTTCTTCGCTCC AATTTTTCATTCCTGTCCCCGCGTTCTTTTATATGAACTAACATTCAGAA ATTTTTGAGGGAATTGAGAGAATATTTTGGCCAATGAAACCTCATGTTGT TATATAGTTCGTTCGTATAAAAACGTATATATAAGGTAGCCGAGATCAct ccattttcttcttttgttagGAAAGCACCAGACTTGGAGGGAAGATTAAC ATCTATTTGTAAAGAAGTTTTAAAAGATCTTTCACAACCTGTCAAAGATT CTTTCAACCAACCAGCCTCCTAATTAGTTGAAATGTTCAAAATATAACCT AAAAACCACAAGAGGTAATTTTTACATGActtgaatcaaatcaaaatata tgCAACAGTCATTGTTGCAACTTTTCTGTCTATACGGAAATCCGTCAAGC TGAGATACGAATAAATTTTGTCGTAAAGAGGATTTTTGGTTCATCAAATG GCCCACTAATTCAAATGCATTTCAAGTTTTCCGTCCATATTCACCAAAGC CAGTTTCAACACTATACAGTTTTTAAGTATTTACCATCAACGTAATTCGG CTTTGGTAATTTTCAACTGAATTCCTTCTAAGCTGATTTTGATGCAAAGA AGTGACAGATTGCACTATATTGTGGAATGTCGAAAGTGTCACAGTAGAAT TTCCATTATTCGAACACGTGTTCTtgggttccaaataaacgccccccccc ggaccttattaagaccccccccccccgtttNTCTATTAGTTTATCCTATT ATTAATATaattaattactgtaatttggaaAATCTAATTTTATATTTCAA CCGTCCTAAGGAGTTGAATAATATTTATAGCAATTAGGATTTTagattta tagatttttttaattgttttagtTTTATGTAAGTTTTTAAGTGGCGTGGC GC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028006TCONS_00028006Clytia hemisphaericatranscript
TCONS_00028007TCONS_00028007Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028007-proteinTCONS_00028007-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000661supercontigsc0000661:39697..43798 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PHACTR4PREDICTED: phosphatase and actin regulator 4 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.88 2.31 1.08 0.8 0.39 0.59 0.73 0.54 0.65 0.88 0.95 0.78 0.79 0.47 0.68 1.51 0.71 0.89 0.09 0.05 0.29 0.33 2.89 2.13 1.28 1.28 0.4 0.22 2.22 2.57