XLOC_016075 (gene) - C. hemisphaerica

Overview
NameXLOC_016075
Unique NameXLOC_016075
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000675:14393..18959-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016075 ID=XLOC_016075|Name=XLOC_016075|organism=Clytia hemisphaerica|type=gene|length=4567bp|location=Sequence derived from alignment at sc0000675:14393..18959- (Clytia hemisphaerica)
GACTGGGTTCGACTTTGTTTTAGACGTAAATGGTCCTTTTGAATAATTTT
AGAATAAATGCTAAATACACTTATTAGACAAGACATGTCACCAAGACAAA
GAATATACATTTTATTGTTGGTGTCTGGTTTCTGTTGTGCAAATTCGTCA
GTCGAGGAGCGGGAGGTCTATACACAAGCTCTTTTAAACATCGAGTACAA
ACCATTGAATAGTATGGAATATTTGACGAAAAAGATGGCTGGAAAATTTG
CTGAACAATCTACAAAACAGAATGTAAGAGGAATTTTGTATTATGCAGAT
GATTGGTGCAAAGAGCCTCAAGACATAAAGGTATATCCGAACATACCGTT
AAATAGAAGCTGGATAGCTTTGATACCTCTGGGAAATACACAACAAAGCT
CTTCATGTTTGTTAACAGAGAAGATATTGACCGCTAAGAAGTTGAATGCA
AATGGTGTTGTAGTAACGCACAATGAAGTTAATGGAGAGGTGCCAGTTCT
TCAAGATGACACCCATGACGTCATTACGGTCATGATAAACCTTCAAAGTG
GGGAAGAACTTCGAAACTTGATTTTGGATAAAGAAATAGGTAAGATATTG
ACAAAAATCATATACTTTACGCCAAATCTCGTAGTACCTAGAGCCACTTG
TGCTTTTTTTATTTCACTGATGGACACGATACAATCGTGAAACCTTAAGT
GTGCGTCATCAGAATCATCAAATCAAAAAGCGAGCTAAGGAACTGGATAT
GACTTTGACTTATCACTAAAGAATTCCAGGGTAAAAAATTGTTCGGCGAA
AATCTTCATGTCCTTCGCCAACAATATCGTCACTTTTCAGACATTTTTTT
CCAAAATAACTTTTACCCTTTTACCGATACATAGATCTGATGCTTTTCAA
TTCCCATCAAGTTCAGCTATTCCAGGTCCCCAAAAGTATCCAGACACAAT
AGGCCTTTTCATAAATTACGTCACGAACACCACTTGCCTCGTATTCAAAC
AATTACCATGGTGATTATGTCCCTTGACATAAAATGATTTTTTTATGAAT
AGAAAGTAGTTTCAATAAAATCCACTGAGAGTTAATCACTATGGCAATAA
TTTCAAAACGAGGCAAGTGATGTTCGTGACGTAATTCATGAAAAGGTCTA
TTACCTGGCTCTGAGAGATCGGAAGGATAAACCCTAATTGCTCTGTTTGT
AGGTTTTTTTGGCGCCTCTAATTCAGTAAATGCCATCAAACCGTAACTTC
AAAATTGCAAATATCTTTTGCGTACACACCCCAACTAAGAAAAAAAGGCA
ATCTATTTTTTTATGGAGACAAAAAAAACCGCGGCCGAGAAAAATCGGGT
AAACTCATATGATGCCAGTGGCACTCAATGGTTAAAATTGATAATCTTGT
TATTGTTTTCAGTCGATGAAATGCAATGCACTGTGTCTGTGGGGACAAGA
TTTGTTGATCGACAATGGTCTAATAGAAATAATTCAATTTTAGCAGTTAT
AATTATACCAGGTGTCATCGGAGTTGCTTTGATACTGATAACTATATGGT
GGCTTTTGACAAAAAGGCGCAACGGCCTGTAGTGTGGCAGATTGACAAAA
AAAGGAAATACACTCCCAAAATATGAAATTTTCGAAATTTTCGGAAAATT
CCATTATTTTAGGAAATTTCAGTGACTTTCATTTCAACGAATGTTCTTTG
ATCAAGGGACAGCCTTATCAGCAGTCGGACCCACGATCGAAGGACCGGTG
TTTATTTTGTACAAAAAAGAGCTCACTTTGTGATTATAAATAGTAAAGAA
AGCACTGTATTGAAATTAAGAGGCGTACACAAAAAAAATGAATTCTTTCA
TTTAGAAATTTTACAGAAAAATGTATCTTCGGAAGACAAAACTAAATATT
AAGTAATAATATTTTATATAGAAAATTATAAATTTCATACAATCTCGGTC
AAGATATATTGGGAATTTTGGTTAATTTCTCGTTTTCAACAATTTAAAGT
TCGGGCAAAAAAGTCGCTTTTGGGCAAATTGATATATCTATTCCAATATT
TCGATTCAGGAGGCGTTTATAGGCTTCCAGGCTATATTCTGAGCCCTATT
GGATCATTCTTGAACTTTTAGTTCCTCAGATCCTAAGGTCTCGTCCTACC
TAATTTAGAGCGCTTCCAAATCGTTTGTGGTTATAAGATTTCGTGGGAAC
TTCCCTTTTTTCTCAAATATCATGACTTTGATTGTAGCTAGGAACGTTAT
ATTGATATCATAATTCTAAATTGAACAATTTCTATCAATGTAAAATTAGT
AATAAAAGATTGATTTACAACGGTATGTAATATATGAAAAAACTGGAAAA
TCTGATCTGGTACTCTCGGGTATCGGGTATTAGATCTAATAAAGCCCCCT
CCCTGCGCTAATTAATTTTTGGAAAATTTTCCACCCAAGACATTTTTATT
TCAACTGATCTTGGATGTGCTTTAATCTTTTTAACAATTTTAAAATTTAA
AAAAAAATTCTTTTTTTGGCGTTCTTGAAATTAATTTACTGAAATATACA
GGATTACCTTAGGTTATGGAAATTAGACCTCGAGTCGATCAAATCTGCTA
ATCTAATTTAAATGGGGAAATAAAAGAATTACTGCAGTCTATAAAAGTTT
CTTACGAATTTGAATTATTTTGAGGAACTTCGAATAATTACTTAACAGAA
TAATAACTGACCCCAATCAATCAACCAATCAACCAATCAAGAATATCTGC
TATCCTTAAAAATTATTTTATGCTGAAGACGTGAACATACTACGGAAAAA
AAATCTTAAAAAATTTCATTTATTAAAAAATATATAATAGACCCTATTTA
CAACAACTATCGACTAATTAGATTGATCCCAGACTTAAGGCCTCTTTGTT
TAGGTACGTCTTTTTCTTGCAAATTTTTGTATAAGGAAGGCGTTTGGTAC
CCTGGATTTAACTTTTGGTCATAAATTTCCTTTCAAAACAATGAAAACAT
AAAATTTAACAGTCGGGTATATTTGAGCCTAAATTTGAGTCTTTTGTCGT
ATAATTGAAAGCTAGGTAATTGTAGGTCAAACATTCAAAAGTGCTGTTAA
AGTGCGGATTAGATTTCCATTGAAAAAAAGGACATAAGCTAAGTTAAGCC
GGGACCAAAGTATATGAAAGATGATCATGAAATTAAAAAATATCTAACTC
TATTTCAAAGGTGATGGTAGGAAATCTTTATAAGACGAACCAATGTCTAA
AGTCTTGAACACCGATTGATCTTTAGTGGAACGCCATGTGAACGACTTTG
AACGCGTCACATGTGTAGGAGTGACACGCGATCGAGGAATAAAGTCTTTA
GATCTGTTCATGTTATAACTGGATGGCGGTGAAATCAATGATGAAAAACG
CGAATTTGTGCTTCGTTGTTGATGAGGGTATCCCTTGGTGGGCCAACTAT
GGCTACGATCATAAATAAGCGAGCGGTTAGATTGAGCGGACGCGCGACTC
ATTGGTGACTGTAAGGAACAACCAGAACGATTCAAGAATGGAGAAGCACG
ATAGACGTACGGCGAACGCACGTTCTTTTTATTGGCAGACAATGCTCCAG
GTGTATTTCCATTCCTCAAATGCAGCTCCCGTAAATTCATAACTGGCGAA
ATTGAAAACGATTTCAAGTCGTTTTTCGGCGTTACAGGTACCGTGGCTGC
GTCCCCAGATGACGTTAATTTAGCACGAAATAGATTAGGATCACTGACCC
AATCCATACTTGACACACCACTATCCGTACGCCCTTCTTCAAAAACATCA
TCCGTAGAGATCTTTGCGAAATCAAGTGGTCTTAACATAGAAGATGATGA
TCCACTTCCGCTTGCAACCGCTGTGCTGTTCAACTGATATTTCCTCCGTT
GTTTTGTTGTGGTCGATTGGAAGGGTGAACTATTTTCTTTATCGAATATT
TCCTCTTCTAGATAAGAAGACACTTTAAGAGATCGTTTCATAGCGGATAA
GGCTCTCCTACACACAAATTCATCCCCAAAAGACACATTTTCACCTCTCG
GCCAACTCCATTTAAACTGTTCGTCATTCTCAATGGGCGAGGGTGAAACA
TCATCATTGCTATCCCCGGTGGAGGGTGATCCTATTAAGATCGGTCTCGG
TAAATTAGTTGACCCGGTTAAAGATTGCAAGATCCGGGATCGAGCTCGTC
CGGTGTTTCGTTCCGTATTGAATTTAGTTTCTTCAACTGAATTTTCCTTC
GACTTTCCACTTGATGAAGGTACTTCACGATGCTTCAAAATCCCTTTAAG
AGGTGTCGCAACCAGTTGGGACCGATTCGGGGTGGTGGGCGTTAAAATAA
TCTTGGGCGTCGGGGCGGGATCTTCATCTTGATCCATTTTTGCACTGTTT
GTAGGTTTCTCTGGCTTGGGCGTCTCGACTGTTTCCCTTTCTAGATCACC
TAATTTCAAGGGCGGTGAATTATTGTCTTCGGTTTTGACGTCGGTTTGGT
CATTGGTCAAGACCACATCTTGTTCTTCATCATCTGGTTCAAGTTCAGTA
ATATCTAACGGTCCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028377TCONS_00028377Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000675supercontigsc0000675:14393..18959 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37	0.28	0.18	0.06	0.04	0.09	0	0.06	0.07	0.08	0.03	0.12	4.58	4.79	1.04	1.24	0.3	0.51	7.99	8.4	0.05	0.07	0.3	0.19	0.36	0.45	0.04	0	0.13	0.09