XLOC_016095 (gene) - C. hemisphaerica

Overview
NameXLOC_016095
Unique NameXLOC_016095
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000676:174527..180561-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016095 ID=XLOC_016095|Name=XLOC_016095|organism=Clytia hemisphaerica|type=gene|length=6035bp|location=Sequence derived from alignment at sc0000676:174527..180561- (Clytia hemisphaerica)
CTAGACAATGTAGCAAACATGGTAAGTATAAGCATACTGTGCTTTTATTC GGCTAAAAAAAATTTTGCGTCGGGAAAACTTTTTCAAACTTTCAGCAATG ATTGACTGTGACAATGAAAATTAATATCCAACACATTTTTTATCTTCTTA CCTTCTTCATCTTCAATGAAGCACTCAAAGTTTACTGAATTTAAGCAGGA TCCTGGACAGTTCCCTAACTGTCCTTATCTTTAATAAACCCTAGCAGCCA GTATAAACGGAATAGATGTTTTGGCGAATGCGACAGTCTTTTAAATAACT AATTACTCCACAGCAGTTACCTAGAGACAAGATAATTTATCATGTTTTTA TTGGCTGAGGCCGTGAGGGAAAGTAATACATATGGAGTAATTAGTTATTC AAAAGACTGTCGTATTTGCCAAAACATCTAAGATTATCTTGTCCTTAAGT AACAGCTGTGTTGTAGAAGACAAATCAGTAATCTGACATTATTATATACT TTCATGTCTACAACAGGATTTCTCTGAAGTAGTTAAAAACTAAACAAAAG AAAAAACAACTGGAGTAAACATAATGCGGTCTCCTTATGATTAAGGAAGA ACTATTGAGCCTAGCTAGAGTATCAGCCTTGATGTATAGCTAACTACCTT ATTGGTATTATATTTCATGTGTATAGTCATCCGGGGTAATTACGGGACGA AATTCACTAACCTTTCAAAATCTCAGAATATACAACAGCTCTTGCTGCCA TATTTTGTCAAAATATTAAGAAGTTGTTTATCTTGCCTAATCCCAAATGG TTTGGAGCTATGACCTATCATTCTCGCAAAATTTTTGTGAATAGGTGTGA AATCTTTTGTGAATAGGTGTCAGGTAGGAACATTTGACGAGTTCCTGTGT ACGCCGTGTAAAAAACAGTAAAAAAAATCATAACAACACTCATTTAAAAA AAATACATACACGGCGTACAGGAACTCGTCAAATGTTCCTACCTGACACC TATTCACAAAAGATTTTATATTGGACTGGCTGAACCCAAATTTAAGAAAC GCTTCGCAAACCACAAGTCTTCATTCGCAAATGAGAAGTACGAAAAGGAG ACAGAACTTTCTAAGGAAATTTGGAGGTTGAAACGTAAAAACCGACACCC AAAGATTACTTGGAAAACAGTCTGTCGTTGTCCGCCCTTCAACCGTGCCT CGGTAAAATGTTCACTTTGTCTCAGTGAAAAATTTGAAATTGCAACATTC AACCAGCCCGACAAGCTGTTGAACTCCAGAAATGAACTGATTTCGAAATG CCGCCACGTGAACAAGTTCAGGCTAAAACAACACGATTCGAAAGACTGAC GTCAATTGTTGTCGAAAGAAGCCAGTACATTGTTCTTCGTAAGCATTCAA AACGAACTTTAGTTTTTTTAAAATTTTATTTTCAACTGATGATCGTCTCC ACGGCGTGAAACTATTAGTTTTGAAATAAAACTCATTAACTTCATTCGAC AATAGTGAATAGGTGTCCCATAATCACCCCATGATTTGGGGTAAATACGG GACACCCCTGGGTAATTATGGGACGCGTCTCGTAATTACCCCTCACTGCT TTTGCTTGAATGGGATAAGAACGGTACATATTTTAAACTTTAAATAATGT TCAAAATAAGTGAAATTTAAGGAAAGGCAAGACGTTTTTTGGGCAAGAAC TAAGATTTTCAGCAACATTTTTTTCTTTTTTAAAGTACTAGAAATGCTAT ACAACAACACAAAGAAAATGATTAATGAAAGAACAACGAAGTAAAGAATG TATATATAATGTCTGTTGTTTTCTATTTATCCTTTTATACTAAATTTCGC GATTGCCAGTTTCTGGAAATTTTGGCCTGTATTAAATTTCGCGATTCACT AAATTGGGCATTTTCAAAAAGTGGGAATAAAGAAAGAAAATGACTGATTT CGCTTGAAACACAAAGTATTGGGTGTAAACATACCAAAAATAGTAACGAA ACTAGTGACAAAAATNATGATTTCACTTGAAACACAAAGTATTGGGTGTA AACATACCAAAAATAGTAACGAAACTAGTGACAAAAATAGTAACAGTGTA ACAAATAAGTGTTTTCAATTTTCGACCTATTTTGAAAATTTTTCGCAGGT ATTTAATTTAGCGATTTTGTATTTTTGAAAAATTTATACGGTATTAAATT TCGCGAAATTTGACCTAAAAAATTGCAAAATTTTAAGTACCCGCGAAATT TTGAAACACGCAAAATATAATATAATACCAATAAGTTCACTTCACATATA TAAAGCTACGTTTTATTGCAAACAAATCATGTCATTTTCACTACCCCTCA GTACTGTGACAAAAATTTTGTAACAATCTTAAAAACTAACCTTACCTTTC TTTATTGTATTAAATTTTTTTCCCAAATTCACTCATTCACGCAATTTTTG TTCACGCAAAGACAGTGTAGTTTTCAGATCTTTGGTTTAGAGGCTTGAAT ATGAAAAGAAATAAAACTGATTCAGTATCAGCCCTTACTGTATTGGCATT ATATTTTGGCCTTTTGGTAGAAATTAGGCGCCAGCCTAAAAAAAGGCCAA AGTAAAATAAGGCAGAATGAGGACCAGCAAAAATCAAATGATTTGATACT TGAAAAGCACTTATGAAGTCTCAAATATTTAATAAAATAACTTTAACCCA GTTTATCTTTAATTTTGAAGGATAAAAAATTAATAGAAATCAAACAATGG CTAACAATTACTCAGGGAAACAACCCCATGGCAATGTTCAATTAGCTTAC AACCCTGGACAAGCACAACATTATGCTCAACCTTCATCATCCTCGGGTAG ACCACAAGTTGAATCAAGTAAGTAGTATGATCTCTTTGATATTTTTTTCA ATATAATAAAGGTGAGACCAATTTAATTTGTTGTTCTACGGGCAGATCGT TAGCAAAATATGAGTCGGTCCCAAGTAATATAAAAATAAGATTTTCATTA ATAAAGGAAGGTAATTAGGCTTTATAAGTAATATTTTCAAAAATTCATCA TTCATCTTTGATGGAGTTTGTAATAAAATCTTTTGTGCATAGAATTCATG ATTCTAGATTCGTTTCAACTTTTTTTTAAGTGTAAATTTTTTAAATGACT TATTGTTAGAAAATTGAGGCATAGGAAATTCAATATTGTTATTTTTTCGT TTGCGGCAAATGCTAGGTCGGTCGCGCCCGTAGAACAACAAATTGAATTA GTCTCGCCTAAACAAAACGTTTTAGTGAGTTAAACCAGAGCTTGTTTTTT CCTCTACTGCTTTAAAAGTGCATTATGTAAGACTTAATCTCTTTTGTTGG GGAGAATACATCCTTTTTATTTATTTTAGAATATTCTTTTTTATGTTCTT TATACAAAAATCAATTTTTCAGAACCAAGACAGGCTGTAGCAGCGCCACA GCCGCCACCACAGCAAACACATCAACACCAACACGGTGGCCATGCAAGTT ATCAGAGTAAATACGGTGAGATGTTGAATTTTATTGAAGAAATTGGAAAG GAGGTACGACCCACGTATGCTGGAAGTAAAATGGCTCAAGAGCGCCTGAA GAAAAGTAAGTACTTTGTTTGTTATGGAAGCTTGCTTTTGTTCATTTTCA CAGGAAAAATTGTTGCTTTTGTACTAAATTATTTCAATTTTTCACCACTA ATTTATTTACTTTATCAGATCACCTTTTTTTACTGTCTTTATCAAAAATC ACGATTCGGTTAGAACATCATCAAAACACTGTAATTGCCTACAAGATTTA AATTTGGCTTAAAATCGTAAAAGGGGAGTTTTATCCCTAAAACACGAGAA TATAAAGTATATAAATTTTAGCATTTGTTCTAAGATTATGTTATGATCTG TACAGTTTGCAAATTTATGACCGGACCATAAAAGGCTAGTTCAGTACATT AAAGTTACCGTTTTCTCTGATCAGACTAACAAGTTTTTCTAGTAAATAAC AGCATTAAAAGCCAGCAACTTAAGTCACAAGTATTTTTCCTAGGGTAAAT TAGTGTTTAGATATATGTCGAGGTTTTTTTGATAGATAAGTTCTGTACAT GAAGTCTCCATAACTCAAATACGCATGGTAACACAAATCTGTTCCAATTC TTAGGTATATTTCGAGTTTTAACTTAGGAAGAGACAATAAAACTTGTTCG AGTTAATGAGATATTCGAGTTATAGAGGTTCGAGTTAAAGAGACGCTGTA TAAAGAGAAAAGTTGAATGATCACTAAAGAGCTTGGAAGATGAAAACAAT AAGTGTTCTCTTTAAATTTATTTATTTCTTTTTCATTTTTACTGATGATG GTGATCGGATGACACCGAAACGTCTAAATATATATGTTTAAATTTTATTC AAATAAAATGAAAACGTTTAGTGAAAAATCTACAATACATTGTATTCCTT GAAGATTGCTTCAGCATGAAACAACGTCTAGCAAAATGTTGTAAATTCTT TATTTCTCGATATTTCTCTCGAATTTTTTCGGATTTTCTTTAGCACTTTG TGATTCTATTTATTTTACTGTTGCTTTTCAGATATCATGCATGCACGAGC TTTGGTTAGAGAATGTTTGGCAGAAGTGGAAAAGAGTGCACGACAATGAG GTTGTAGTCGGTGAAGACTGGGTAATGTAAAGGATATTTTTATGTCATTT TTTTCGAAGATGTTTATTTATAAAAGTCTTTATTCATTATTACTGCACTG GTCCACAAACTATAATACTCTTTTTAAGGTCAATTTTTATCAAGAAGTTA TGTTCAAGACAAATTTTAGTAAAACATTCACATTCTGAAATTTCTTTAAA TTCAACCTTAACAAATTTTTAACGAAATGGGGCACAGTTTATTAATAACG GTGCACTGACTGTATATGACAGTTCTGTATGCCAAGTAAAATGTGAAACT CATTGTATCAAACTCCATTTGCTTTAAGTGTTCATCTTTTTCACTTTACC ATATGTGTTTTGTATAAGAATATCCAATATTTTTATGCCTTCGGATGTTC TTAACTTTTTAAGTATTGAGCCTAAAATGTTCTTAACATTTTCTTATTTT CACCATTTTGTGGGTCTTTCTGTCCATAGAAATTGGATGTTTAAGAAACT GAAAAGCCTTAAAATGTTCTTAACTTGTTCTTAATAATTTGACCATCGAG GCCTTATGTTCTTATATAATTTGTTCTTATAAAAAGGTATTATTCCCTTG AGAGTTGTTTCCAGATGTCAGTGAAAAAAGTGCACACTTAAAGTAAATGG AATTTTAGGTGCTAAACTTTTTTAGTTTTTTTTTCAAGTATTTTTTCATT AATTTTGTACATAAAGTAGGCTTAAACAAGAAAATGCATTCATTGCATCT TAAAAGGATTTCATAAGAGAATCAATTTCAATTGTTGTTTTTAGTCCATT TATCAAAGTTCAACGTGAAATTCTGACTTTATCAGTCGAAAAGTTTTCTC GAAAATATTTTTTTAATTCGTGCTAATCGCTCCTCATATTATTATCAGTT TAAGCAACTTTTTTTGTGTTGTTTTTTATCCTCTTTTTCTAAAAATTTTC CTCTATTCTCTTTTGTTATTGCATTTTGATGAATAATTCAAGAGAATAAC TTTTGAAAAGTCCATCACAGGTTTAAAAAACTGCATAAAAAACCTTTGAT ATATAGATACTCTTTTTAGATTTGGTTTTGTCTCTTTTTGATGGGGAATG ATGGACGGGCTTCGGAAATTTAAAGATTTTTACATCACACTCATTAACGG AAATTCTGTTATTTATATTGATATTATCTAGGAACCACTTTAATATAATT TAGGTAAGTATTTAAAAAGAATATTTCAATATTAAATTGATCAACTGACG TATTTTAAATATAAAGACAAAGGTTAAAGTACAACCATCAGTGTTTCAAC TTCACAAAATTGTCTTCTTATTATTTTTCCTGTCATAAATTCTCGACTCG TGCAATTGACTTATGGATAAATTTACTTCTTGCGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028414TCONS_00028414Clytia hemisphaericatranscript
TCONS_00028413TCONS_00028413Clytia hemisphaericatranscript
TCONS_00028412TCONS_00028412Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028413-proteinTCONS_00028413-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000676supercontigsc0000676:174527..180561 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.88 86 50.04 48.42 121.83 98.8 96.98 97.67 85.27 76.91 58.39 62.15 35.59 35.01 33.86 33.16 65.82 65.24 19.63 26.53 42.64 45.26 54.47 53.51 45.63 48.57 51.42 33.87 30.89 30.44