XLOC_016370 (gene) - C. hemisphaerica

Overview
NameXLOC_016370
Unique NameXLOC_016370
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000708:100159..104239+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016370 ID=XLOC_016370|Name=XLOC_016370|organism=Clytia hemisphaerica|type=gene|length=4081bp|location=Sequence derived from alignment at sc0000708:100159..104239+ (Clytia hemisphaerica)
TAGGGTGAATGATCGGATAATTCTGGACAATGTTGATAAAAGTTCTCATT TTCGTTTGTTGGTTGGTTTACAGCGTGAATTCGAGTGGCAAAAATGAAAC TGGACTTGATCCTACTGGGTAAGAGCATAACACTTTCCTTTCGTTTtgaa ataagagtgatatcgcttgcttactcgtcaattttaattcacaagctttt tcacattggattgacacagatgtggaacaagattggtcagaaagaggaaa agaacaaCAACTTTTTGCTtaatcagcataatataacaatgggcagacac tgtcctgatatgaaacatgtgtctgatatgaaacgggaacactcatttaa aaataaatccttTAAGGCTATCTAATAACCAACATTCAGCTACTTTGTTC AAGGTTGTTGGTTCAACTTTTAACTAAGGTCATACCATAGATTTGATATA GGCACTAAATAAACAACAAgctatattttcattgatttcctcATGTTCTT GTCTTGTCCGCAGCAATGACATTATcgttcactctccttccttaatgaaa taatttttttgctgtaTTTTAATCACTTTTTCCATCAAAACGCGGTCTAT TCCAAAAGGAGTATTAAAGTTTTCCTTATAGAGAGGcaagagcatcaaaa taattgctaattatgtttcgttatgacgtttcaaattGCGAGAAAGATGC GAAAAATATTCCTATTTAAATATGAAAATTaaatgttgacaccagaaata tTCAACCGATACACCACGagcctccaaaagattttcataccaaatTGAAG CCAAGACCGCACTCAAGTCTAATATATGTAACCAGATTGCAGCGGGTCAT AGTTTTCTTACaggcacggtaaacctctgaaggcgcttgaaaactAACCA TCTGTGGAAAATAGTCCTCAAACACAATCATGCAACCTTGCTGTCATTCT CAGTCCTTTGAAACGAGCGTGGTCCCTCCGAAATCAAAAATTGCATATTT GTCAGATTGTTACGTTTTAACCCattcctttagagcttcagcgtggtggg cataGGAAACATttacaatctgatctcaggttgaATGTATGTCAATTTTA GCTCGTCTTAGCTCGTCCCTTTTAAAAGTATTGCGGTAactccaattttt ttaaatatgacaATTAGCCGTTATAAccaatttatttttttagtgaaaat gtttgcaccagaaccatcaaataTTTTGTGAATAAAACACAACTCTACAT GCGCCAAGTATTGGTTCCTTACTACGATTGTGATGGGATCAGTATTTTTG GAGATTGTCCGTTTTGGGCTCAAACCAAAAAGTTCAGGTAAGTCTTAGAT ATTATACTGTATCATCGGTTGAAAGTAGATCTTAGCTTAAAggctttgtt ttcaattaagagtgatatcgtttgcttctcataaattttgatttacaagc ttttttacattgaattgacacggatgtggagcacgattggtcagaaagag ggaaagaaaaacatttttttatatcagcacaatataacaatagggagccA CCGTCCTGATGTAAAAATATGTAaagataaaacctttaaaagatTATTTA GAAATTATAACGTTATGTCGGGTCTTTACCCCTTTGTGCGCgctgttttt gtttgaaaaagttgaaatttttctgattctttttttgaaactcaaaactt aaaagtgccataaaagcttgtagcttttgatttagaagatggttttggta ccattggaaagctatttttatattctttctaAAATCGGTTTATGCctctt taaatcaagtggtcaggagctattgcctcagtattttggcttgtttttga CGCATATACGTGTCCCTCGTGGTCTAAGAGTTAATTGAATGGTCGAGAAG TCGCTATGTGAGAACATGGTTTACTCAACTTTCTGGCACGTAACATAGAG TGCGTTAAGAGCCCTTGtttcttccactttgtttcTTGTTTGGAATAAGC AACGAGGGGAAATCAAAGCTCAACTTTCTAGTTAACATTCAACATTCCAC TACACCCTACTGCGCCAAGCACTGCGAAAACGTTATACCTTAAGAACACT ACTTTTGGCGAGGAACACAATTTTGTATATTTGCAAGAACATAATTTTGG CTAACGGGAGGGTAAATCAGTTCTTTTCTGCCTAAAAAtaagggacaagc tggagtttttacaagctcttatttgatttggttggtcgttaagatgtatt gaatcttattactttttctaaagaacgcgtcatctctatcactttaaatg accaattagtgaattatcttgtaaaaactccagctcatcccaaaaaTAAG TGTTTGCAAAAAAGGGGGtttatttcaaaaatcgaaaattcgccaaaatt aattcccttTAGATACTAAATTATTATAGGGTGTTTACGGggccttgaaa accttgaaaaccttgaaattggACTAAGCAACTTTGATAACCATGAAAGT GATCGTAATGTGAAAGATTTCCTTGAAAACCTTGTAAAAGCATGATTGTG ACAGTATAGTTGTTTAGTTTTGGTCCTCACTGAAGTCGATGCTAAAGCTC CAAAAATTCTCTTTCTCGCATCGCTCGTAATCGTTTTTTATGGACCAAAT GCTGGTACTAGACTTTCACGCACCTCGTCAAGTACGGTGATATCGTAATA TTCAAATCAATTTGAGTTctgaaaaacattgaaaatcgctaaaatattgC CAAAAAGAACTTTAAAACGTATACTATTTAAATCAATTTGAGTTCTgaga aaaacattgaaaataccCAATATATAATGgttcaaaaaaccttgaaaaat cgctaaaatattgccaaaaaatccttgaaaaccttgaaaatggtAGAAAA ATTTCTCTATATAATATAGGTGTTGGATGTGATTCATCATTcttagtggg gtcgtttagcataatttacgggaaaacaatatgatctagctgaaactttc tccagaccttctctataggatggttatgcctcaggaaaaattcccctaaa atcccactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgg tggaacatcccttttttggaacatttcttttttccccaggcaaaacccta agggcgaaattttttgaaaatttcaaactcattttcagatattatcaagt ataccattcgaaagctctcgaaagactatatagaagacttttaaaccggt atagccgatttcattacctaactcaagataattcacgcagaagacgctgt ttatggtcaattttgaccaaagtgtggcgaaaagtggaacttgcgcatga aatatctcgagttaggtaaggaaatcagctataaccgtttaaaagtcttc tgtaTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNgcccttaggattttgcctggggaaaataga aatgtcccaaaaaagggatgttccaccagtgggattttaggggaattttt cctgaggtataagcatcctataaaaaaggtctggagaaagtttcagctag atcatatttttttcctacaaacagcctgtatttttgtaacacgaccacac tatctGTCATTTATTATTATCATTACTATTTAGATCTGAAAGTAAATCAT CAGTGAAAAATGTATTGGTTGTACGAACGAAAAACATATCTGAATGCTGT CCGGGATATCAACAATACAATTCTTCATGCCCAACAGGTGGTTATGTTTG TTATGGTGGtttgttaaaagttttgtttttagataagagtgatatcgata ttgcttactcatcaattttattttacaaactttttgatattgaattgaca cgaatgtggagcaagattggtcagaaagagg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028847TCONS_00028847Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028847-proteinTCONS_00028847-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000708supercontigsc0000708:100159..104239 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.55 13.1 6.27 6.06 1.11 1.13 0.61 1.13 0.89 0 1.67 0.71 2.19 2.04 0.47 1.29 0.97 0.63 4.64 3.02 0.92 1 3.92 4.32 0.63 0.57 1.13 1.55 1.81 2.4