XLOC_016443 (gene) - C. hemisphaerica

Overview
NameXLOC_016443
Unique NameXLOC_016443
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000716:125066..127336-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016443 ID=XLOC_016443|Name=XLOC_016443|organism=Clytia hemisphaerica|type=gene|length=2271bp|location=Sequence derived from alignment at sc0000716:125066..127336- (Clytia hemisphaerica)
GAAAATCATTGGATCGTATTATGGCAGCTGTTACTCCAAGGAAACGTCCA
CAGAAAAGAAAGTTTGAAACATCAGGTATTAATTCACAATTCAACTAATT
AAGTCAGATGCCTTTCAAAACTTGCCTAGAAAAGCTGAATCAACATTTGN
CAACTAATTAATTCAAATGCCTTTCAAAACTTGCCTAGAAAAGCTGAATC
AACATTTGAAACACATTCTTGCAGATTCTAGCAGATTCTTGCATTACTTC
CTGCTGATGAGAATCTTGCTAGATGTTAGTCAGCAAGTCCCCGTGGGTAT
CAGGTTACTGATGTTTGAAATAAACTTTTTCGACAATTTTGAGGTATCCA
TAGCAACGTAATTTCTAAATGACATGTCATCATTTTATAATGAATTAAAA
TTGCAAATGACCAATTAACTAATTTTAAGATAATAAACAAGAGCAGCCAT
TTGCTAGGAAGTATGAAATATCTGTTTTGGGGTCCTTTTTTCCTGGAAAA
ATATCAACTGTTCTAGGAAAAAATGGGACTCCTAGAAAATGTATACTTGT
TCAATCAATAAAAATAATACGGTGCTGCTGGAAAAGTATAACAGCTTTTC
TCTGAGAAAGTTATGTTGCCCCTGGAAATATTAGTGTTTTTGCAACTTAG
CTCCTCAATTTTTGAACAGATTGTCTGCTGGAAAATTGTACGTGTTTTTC
ATTAAAATGTGCTCCTGGATTTTTAGAACAGAGGTATTAGGCTTAGATGC
CCTCCGGATCATTGCATACCATTTAGAAAATGGATGGCAAATGTATATAA
ATAATAAAGTTTCGAACACTTTGACATAGGCACCACCAAATTTTTTATCT
TGACATGATTTTTCATATTGTTTGAAGCAAATAGTACGCTGTATATGAAA
TTGATATAGTCAAAAGTTCATTCAAACAAAAACATCTCAAAAAAGCAAGA
AAACCAACTTATTTAAAGGATTTTTTCCAGGAGCAATTTGATCAATGAGC
AGAGATGTTTATTTTCATTTAAATTTTCTTTGTTTGCTTTAGAACTTCAC
GACCTATGTGGCTATGTATCATTTGTATCGGGTATCAAAATACCAAAAAA
TCCTGAAAAGTCAAAAGCACCCTACTTCGAGATGTATGTTGCACTTGAGA
ACAAGGAAGAAAGAATTGCCTCATGGAACATTGATGATCAACCAACCCTT
TTAAACAAACTGCATCAAGGAATCAACATAACTGGATTATCAAAATCATC
AGATGGTCAAGGTTTTTCCTTCATTAGTCAAACTAAGTTTATGGATAAAA
GGCCAAATTTTGCATATGTACAAGTTAATGTCGAACCAACACCTTTAAAT
GAAGCATTGCAACAGCCTCTTTACTCCAGAGTTACTCTAGAGGTACGTAT
CACTAAATTGCACCAAGGTGGTATTTCCTATGANATCATCAGATGGTCAA
GGTTTTTCCTTCATTAGTCAAACCAAGTTTATGGATAAAAGGCCAAATTT
TGCATATGTACAAGTTAATGTCGAACCAACACCTTTAAATGAAGCATTGC
AACAGCCTCTTTACTCCAGAGTTACTCTAGAGGTACGTATCACTAAATTG
CACCATGGTGGTATTTCCTACGATGGGCTTGCATCCAGGTCAGCTGAAGT
TATTGATAACAGTGTCAACCAGCCTCGCGAAATAACACTTTACGGTAATC
TTACAACAATGATTGAATTAAATAGTGCCTACAGGCTTACATACATGACT
TTGAACAAGTTTAATGGTGTGCGTGTGTTCAAAGCATCTGACCTTACAAG
TTTCGCTCCTTCTATCAATGAGATTGCGGCTCCAATGGCAGAAACAAACA
TCTTCATTGGTCAGGTCCACAGTGTTGTGATGTCATCATTGGCCACATTC
TACAAATGTCCTCACTGTGGGGAAACATTAGATAGTAATGGCTCCTCAGC
AATGTGCCCTAATACAAACTGTGGCGTAGGTCTCTCCACGAATGCAATTG
TTAGTGTTAAAGAAATCAAATTTACTGTTCGCAGTGATAGCAATATCGTA
AGAAATTTCAAATGTAGCCATCAACTTGTTGAAGCAATTGATCAATCAAT
CAGTCGAAAACAAAATGGTATTTTTCCAAAAATTTATTGACACTAAAGTT
GTAGTAACTTTTGAAGAAGCAAGTGGTGATGTTGTATCAATTGAAGAGAC
CTTCTTCTAATTTAATTTACCAGATTTTATTTACCAGATTTTATTTGATT
CCTGATTTGATTTATTCCAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028954TCONS_00028954Clytia hemisphaericatranscript
TCONS_00028953TCONS_00028953Clytia hemisphaericatranscript
TCONS_00028952TCONS_00028952Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028954-proteinTCONS_00028954-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000716supercontigsc0000716:125066..127336 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.29	0.43	0.22	10.41	5.74	4.28	5.73	2.7	2.32	2.46	1.02	0.53	0.57	0.2	0.38	0.3	0.11	0.18	0.41	0	0	0	0.05	0.91	1.01	0	0.1	0.15	0.24