XLOC_016521 (gene) - C. hemisphaerica

Overview
NameXLOC_016521
Unique NameXLOC_016521
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000723:158992..163778+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016521 ID=XLOC_016521|Name=XLOC_016521|organism=Clytia hemisphaerica|type=gene|length=4787bp|location=Sequence derived from alignment at sc0000723:158992..163778+ (Clytia hemisphaerica)
GCGTTTTCATGTAATACATGAATACTATGAAGTGTAAGCTTTCTTTATAA TGACGTAATGTTCTGAACAAAggaaatctgattggttgatgcTTTTTGAG AGCGAAAACGAAATCGGATCATGGCGCTGAAGGCGGCGGCGGCCCCCTGG AGCTGGGAGCCCTGCCTTATTACCCCTCCAGCAGGGAGAAACAATGGGGC TCATTTGGGGGTCATACAACTGTATTTATTTCCAATTTGGTTCAATGGTA AGTAAGTTACTCTTGTTTATTCCATTAGCTAgctattttcaaactcaaca atGCTTAAAATTGGAATTTCAGTCTGATTAAAAGTACTGCAGCTGGACCT TACTTTCTGATATTAAATATATTTTGTAGCTATATTGCGTGTTTGAATAG TTGTTTAGGAGAAGTTACCCACATAAATTACTTTCCCTCGGCCAGTTAAA AAATGATGATAGATTATCTTGTAACTTAAAGGTAACTGCTGCGGTTATAT ATCCAAAAGAACGTTGCGCTCTACTACCAGGTCACTAGTCAACTGTTGTT GTGTCGtctgattgagattcgattgtcgaatgcaatcgaatctcaaccac aattttcagattcaattgatattcgattgtgttcgattgagattcgatta cgttctattgcccagacgatctcaatcgaacggaatcgacaatcgaacca gtcgaaccaaatcgaacgcaatcgaccgattgaaattcgattgtcgaacg caatcaaatctcaatcgaatattaccgcaattttcagattcgattgatga ttcgattgcgattcgaatgatgttcgattgcgatcgattgcgttcgatcg tcgcttcgttgacccccggattgttcctggcataatttctacgggaaatc gaaagtaatttcatttggcttgtgatgtttgagaccttggatgttggaaa gctgcaagaataaagccagacgatctcaatcgaacggaatcgacgatcga acctgtcgaacaacaatcaaaccaatcgaatattacccagaattttgacg ttcgattgagattcgattgcgttcgacaattgaatttcaatcggtcgatt gcgttcgatttggttcgactggttcgatcgtcgattccgttcgattgaga ttgtctggNCTACCACTAGCTAGTCAACTGTTGTTGTGTCGtctgattga gattcgattgtcgaatgcaatcgaatctcaaccgcaattttcagattcga ttgatattcgattgcgttcaatttagattcgattacgttctaTTGCGCGG TGCTGGCGGTTGCGTCATGACTCCCGTTCTTTTGCTTGGTTAACATTGAA GCGCTTCTTTTTTTGCACGGgaaaacatgtggttttgaaCCGTGACCTAA GGATTCGGCCCGAAGCGAATAAGGGCGGGATAAGAAAAGCAAGTGAAGTG TCTGGAAGTGTTATCATGAGGGCAGAAGGACAAATTGCCGAATTAGGTCA CGTGACGAATCATATCCTTTCCATACGGTTGAGAAAGTATGACGAAAGTG GTGGATTGTATGTTTTCAAGACATCAGAGGGGGTCAAACACTCTTCTTTG ATTTACGATGGAAAATCAGCCTTCTTTAGAGCATCGAGCAATCAAACGCA GTCGAAAGACGATTAAACGGCAATCGAACGCAGTCGAACGACAATCGAAT GCAgtcaaacaacaatcgaaccaattgaatattacccagaattttgacgt tcgattgagattccaTTGCGTTccacaatcgaatttcaatcggtcgattg cgttcgatttggttcgactggttcgatcgtcgattccattcgattgagat tgtctggataATTACctgtttcatgcatattgtaataattatgcatgggt gtatcattgtttttctactggactacataattattcaacagggtggcctc tttgaaaaaaggtctattcgtgGCTGCCCCCAATACGGCACTACTGGAAA AATGATTGGATTGTATGTTATCTCACACTGAACAATAATGTCCGGTGCAT TTACAGAATACTTTTCTCCACCAGACAAAACACCGGTGCGTCGTCAGGGT TGTCTGGATGGAAAATCAGATAAGCATGTTACTAGTACCTCGGGACGAGG AGCAATTAATACGAGCAAATGAAATTGgttcaatcgaacgtaatcgagcA ACACTTTTTCGATTGAGATCAATTGATTCAACTTTTGGTTCGTTCAATTG ACACTGTCTGGTCAGAACGGGTAATAGTTGTTTAAGAGAACGTGACgtta ttttgaataactaattactcctaGGGACAATTGATCATTTATCACGTTTT TACTGGCTGAGAGCAGACAATTATGTGGAGTAATTTTTTGTTCAATAGAG TGTCGCGTTCTCCTAAACAACTATATGGAATAATCGATTGAACGTAATAA ATGTTAGCCAGGATTAGTGTTCAATTAGGTGTCCATTGAAGAATTATTAT GTTTGCGTCACTCGCTTGCATCATATTTTCCACTAATTTTCCAATGCAGA AAAGCAGGAAAAAATTTGGAAGAAAGAAATTGTAACAgaattgaaacaaa acatcaaatctAGGGAGGAATGATAAGAAAACTGTGTGTTCAAATcaaac gaacaaacgaacacaCAGCTGAAATTTCGCTGATAAATTAGATTGAAACT ACTGGTTAGTTTAGCTATACCTTTTGTAGTCTGGACCCATACAAAGTTTT AATCCATTTCACAAAGCTCACATGAGATAAAAATTAGTATGGTAGAattg gagattttgaatttgccaccagaaaaaaaaacgtttgaAAACTGGCTAAT CAgaattttgttgcataaatttttCGGGAGAACAATATACTAATCGGCCA ATCAGAAGCGTTTCTACaaaaaattgtagaaatttttgtccaaaactacC CGTCTACTATCGAGTTCAGAAAAAATCGTGAGTAGACGGGGCCCCATCTA TACCTTTTGATGTTTTGTTCCAATTATGTTACAATTTCTTTCTTCCAGAT TAGCGTTTTCTCTAGCTCTTCGCCCAGAACACGCACacataaaataaatg aaatttcaCTAATTAATTATATTGAAACTACGGGGAAGAATAGTGTTAGT TTAGCTATACCTTGGAAGAATACAACAGATACCATCAGAAATAGAAAATT GGCTTACTgatgtgatttaaaaaaacGCAGAAATCTTTTCGTCTGCCCGC CCGCATGTATTTTTAACAACCGCTACAACGCAAACAGAATAATTTTTATA TGAACGTCTTACTCTGGTCACATTGGATCAATCAACCatcaattgaattg aaatttaattttcataaaattaaaCCTGCATTGAAGGTGTATAAAACAGA GATGTATAAGAGTCTACGTTTAGTATCTTCAATAATGGAGAAAATTACAA TTAAATTAGATAGTTACAATTTTGTTCCACAAtttagaatttcaatcaat tGGGATCAAATTGGTTCAATATATACATCTTTGGGTGAAGGCAATAATTG TGATGCAAGTTTGCGTATGTCTCATCATGACGCTTCTACATCTCATCATA GCGATTCAATGTATCATCATGCAGCAGCATGACACTTAAAGGCTTCATCA TGGTGCTCCTATGTCTCATCAAGGCGCTCCTACGTCTCATCGAGGCCCTC CAACATAACATCGAAGTGCTCCtacgtctcatcatggcgccCCTATGTAT CATTATGGTGCTCCAACGTCTCATCAAGGTACTCCTATGTTTCATCATAG CGCTCCtacgtctcatcatggcgctcTCATCTCTGATCTCATCATGGTTG GTCGCACATCTACCCTTTGACCTCACAATTCAACCCTCCGACGTCACATC TCaaatcaagtttaaagttttGGAAAGCTTAAAACTACTTGAAAATGAAG TTTTACCGAACGATTGGTTTGGTTCAAGTAAGGTTTGatgattttattgc ttaaacaaGTCTTTTATGAGATTAACTTGAGACGAGTGAAGTTTccccaa tcaaaatttccaaaatttatggtTTTCCCCCGTCAAATTTCATTCTCGTC AGgattttttagccatttgaacTACCTTCGAAGGGCATGATGTACTCCAA TATTAAGGGTTTCAGTGCagtgtttgatatttttttagataTGATATTTA TAGTTactggttttatttttaatatttgtttaaCATTGCTTTTCACTTCG CCTAAACTGAACATCATACTTCTCATTAGAACCCCTTTcttgcaaaattt tcaaaatatatatccCCATCATCAAAAACAAAAGGGGACACTATGTTCTT TTAGCACAAGACACTAATCTCAGTCATTACATTTTCAAGACTTTATTTGC ACCCCCCTTATTATTCCATTACTAATTTCTAATGTTTGCCCAACGAATCT AGGTTTTATGtctcttttatagtattttccCATCCCTTCTCTATCAAGTT CAAATTGATTTGTCTCTTTTTTGAAGCTCAGTCTataattaacttttatt tttagtgATCTCTCTTTTGATAATCTTGTGAAATGTATCATTTAAAATAA CTACAAgctgcatttaaaaaaataaggaGCCACAATATCTTGCAAAGAAT CACATTGTTAATGTTGTTTTAAGAATTTATTAGTTATGTTATATGAAAGT TAGGAATGATATCAGTaatttatcatttgtttttaacTGTATTTTGTAGG TCTGTCATCttgtgaaaaattaaaaaaacaattctaC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029050TCONS_00029050Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029050-proteinTCONS_00029050-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000723supercontigsc0000723:158992..163778 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.21 0.36 0.18 0.29 2.72 2.4 5.66 8.65 15.69 15.53 29.15 22.82 16.08 15.04 5.45 5.75 5.77 6.55 7.55 10.18 11.77 11.48 5.38 7.77 15.17 18.29 12.03 12.57 10.24 7.02