XLOC_016555 (gene) - C. hemisphaerica

Overview
NameXLOC_016555
Unique NameXLOC_016555
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000725:167950..171541-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016555 ID=XLOC_016555|Name=XLOC_016555|organism=Clytia hemisphaerica|type=gene|length=3592bp|location=Sequence derived from alignment at sc0000725:167950..171541- (Clytia hemisphaerica)
AAAAAATTTTTTTTGAAGTGAAAGAGAGAGAGGTGATGTGTGTATATTTT
GTGTTCGTCTGAAATCTGAAATCCTGAAATATATTTGGTTTGTGTGTTGT
GGAACGGGAACAGTTCTGAAAATTGAACCTGACACAACAAAAGACATGGC
AGGATCAGAAACTGGTGGAGAACAGGAAGAAGTTCAAGTGGAAGTTGTGG
TGTTCTTTTATCAACTTGGAAAGACAAAAGCTGATTATGCACATAAAGAA
ACAGCTCATATCATGATTCCAAAGAATATAAAATCATTGGCGGCATTGAA
AAGAACCCTCACGTAAGCAACAATATTTTTAATTTATAACGCATAGGGTT
CGATAAATAGACTAAGCTGCCCTGGGCAAAATTGGGTACGGGAAATAATT
TGTCTTCTTCTATTCATTTTTGCCACTTTTCAGGACGAACTTTCTGAAAG
CTTTCCAACGGCGGTTACAGAAGGTACTGAAAATTAATGACGGAGAGTGT
TTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAAGAAGTTCAAGTGG
AAGTTGTGGTGTTCTTTTATCAACTTGGAAAGACAAAAGCTGATTATGCA
CATAAAGAAACAGCTCATATCATGATTCCAAAGAATATAAAATCATTGGC
GGCATTGAAAAGAACCCTCACGTAAGCAACAATATTTTTAATTTCTAACG
CATAGGGTTCGATAAATAGACTAAGCTGCCCTGGGCAAAATTGGGTACGG
GAAATAAGAAAATTTTTTAATTTTTGTCTTCTTCTATTCATTTTTGCCAC
TTTTCAGGACGAACTTTCTGAAAGCTTTCCAACGGCGGTTACAGAAGGTA
CTGAAAATTAATGACGGAGAGTGTTTCTTTTGTTATTATTCCTGTTATGG
GAGTAATTGCTCTCCACTAAAAACACTGAGTTCCTTCTGTAACCGCCGTT
GCCTTCAGCAGCATGTTTTCTAAAGTTTTTCTCGGTAATATCTTGTCCAA
GGTCGGCGGAACAACCGTATTTTTGTGAGTTTTTTTCGATTTCAAAGTTT
TACTTTTTAAAGAATTTGTCGCCGCGAATTACCCTGTTAAAAAATTTTAA
AGAACCTTTTTAGCGTAAGCCGAAATTAGGCAGTGGCGACATTCAAAAAT
CTTCAGAAAAAGATAATGTTATGTTTCATTATATTCAAGGGAACAAGCTG
GTGTGAGAGATATAGCAAAGACATTACAATGGTCAGATTGCGAAGTGCTT
CTTTCAAGAGGAGTAAAAGGCCCATCTGGAACCGTTACCTTTGCCATTCG
CACGGATAGTCAACTAAAGATTGAGCTACCAAGTGTCATGTTTGGGAACG
ACAGGTTACATGGTATGTCTAATTTAAACTTAACCTTTTTTAAATCCAAA
AACCTTCGCTGCACTAGCTCACCACGCGAGTTTTTGATCAGTTTGTTGAG
AACGGTGCAAGCAATACTGCACTTTTACCGGATTGGGATACATAAAATTC
GATTTCTATTTTTACTATCCTGTATAAAAAAACTGCGTAAGCATTTTTAA
CCTACTGGCTGTGCAAAAATTTAAGGAAAAATTCTTGCCTAAAGTTTCTC
TCGGCAAATTTTGAAATCCTTTGGTCAAAAGTTTCTAAATTTGTTATTCT
TTTTAAGGTTTCTTTTTCCCTTTTCCCACAATTTCCCCCTTTTTTCATTT
GAAAAACGTGGATACGCTTTTTGATATGAAACGATCAATTTTTCCCCAAT
CAGGATAGGTATCCCGATCTTGCCACATTGGCAGAAGAGGCCAATGGGAG
AAGTTTTATACACGCTGAATAGAATCGCTTTTTGTCCTCACAGGTTTTTT
AACTTAAAGTTAAAATTATTTCATTCTAGCAACGGTGTATCCTATCGAAG
CTAGATTCCGATCGAAGGCTCCAGTCATTTCAATCGAAGTTTTGCCATCA
TCTTCAAATGCGGTTGAAACCTCTGAAATCCGAATTAATGCAGGCGAACT
CGAAGATAAAGAATATTTGATAACAGGTATTTTATGTTACAGTGAAATCT
TGACTTTCCGGATCAAATTTTAAAGAATTTTCCTGCTGAAATATAGTTCC
CTTTTATTTTAGTTTTTATTCTTTACTTTCCTAATCAGGAGATTTGTGAA
CATGTGGGATAAGGGTTAAAAAGATAGCATTTTTTTGTCGTATTATTTGT
TTACCCAGCAACTAATTTGCACAAAAAGTGGGGTCTTCAGCCTCTCCACT
TACATCAGGGCTGGAAATTCCGAAAAAAAGGTAACATAACGATAACGTTG
TGCCAACTTGATATACGAAGCGAATATATCTTGAAATACGGAACCTTTGT
ATGATATTGGTTTTGGTATTCACTGGGGTAAAAGTTTTTACTAATAGTAT
AATATGTAAAGAATATCTTTTCGCTAGTTTTATTTTTGTTCTCATGATTT
CAGAACTTGGAAAATTGTCAGGAAGTTCATTGAATGCTGTAGAAGGTAAT
CGACCTGTGAAGTTTAGAAAAGAATCCCGGGTATGGCCATGGGATGTCAT
TTGTGGGCGTTGCAAGACGAAAGTTATGTTACGTTTCGACGCGAAAACTG
CCGGACGGATAGAATACTTCAAGAAAAGTAAGTACATTATATATAGATAT
ATTCGGCTGTCACAGAATAAAATCTATTCACAGAAACTAAGAACAATGTG
TTGACGAGAAACGTTTACTTGTTTTTAGATCCTTTACATAAATTTTAGTT
GAAAACTTTTTTTCTAAATTCAGTCATCCTCGAATCCTCCTTTGCGAGAG
CCGTTTCTATAAATACAAATGTTTTGGTGGATCTGAGGAAAGGTTTAAAA
TTTTATGATGGATAGTGTTGATTTCCATAAGGAATATTGATATTCATACT
CTCCGCCATAAATTTTGAACTCCCTTCAGATCCGCCACTGTAGCAGTAGT
AGTAGTATCCGAATTTTTCAAAAACATTTTGATGGTTTAAATGTTAAATC
AACATTTCAAATATTGCAATTTTTCTTTCAGAGCATTATGATGCGTGTAC
TCAGCGTGCTGAAAAGAACAAGAAAGGAAAACGACAGATGACGATTAAAC
ATTCCTTGAATAGAACGAAAAAAGTCCGTGTTGCTGTCGACTCCGACATC
GAAATTGAAAGCGATGATGAAGACTTGAGCAAGTAATCAAACATTTTTTT
AACTATTTTATGTAAATACTGTAGTTTTAGTTCACGAAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029114TCONS_00029114Clytia hemisphaericatranscript
TCONS_00029113TCONS_00029113Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029114-proteinTCONS_00029114-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000725supercontigsc0000725:167950..171541 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.12	0.06	0	0	0.28	0.38	1.78	1.53	0.74	1.79	0.49	1.38	0.84	0.54	0.14	0.11	0	0.15	0	0.13	0.06	0	0.07	0	2.19	1.35	0	0	0.13	0