XLOC_016578 (gene) - C. hemisphaerica

Overview
NameXLOC_016578
Unique NameXLOC_016578
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000726:165320..169501+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016578 ID=XLOC_016578|Name=XLOC_016578|organism=Clytia hemisphaerica|type=gene|length=4182bp|location=Sequence derived from alignment at sc0000726:165320..169501+ (Clytia hemisphaerica)
ATATCGAGCCACGGCAGACGCGTGTTAAAAACGTTCGTCCACAACGTCAA
ATATCGAGTAGTTCAGATGACGAAGGAACTTATGTAAACCACAGGACTAG
TTTAAATCTCTCACTCGACGACGAAGATCCTTATACCAATCGACCAAGTC
CTTTAACCGCCGCTCCTTCAACGAAACCTAAACTCGTCGCTGATTCTAGT
TTTGATATGAACGTCGTTAACGTTAAAATCTCACACAAACGTCAAGGTTC
GAATGTTAGTATTGCTTCACTCACAGAACGATGCCGTGAAATCAAGGGCG
AAGCAATAGAACATAACACTACGCCCAAAAAAGCACCAATCTCCGCCAAC
GATGATAGCTTAGAAGCACATCTTCAACCGCATCACGAACCGCTGACGGT
TGAGCATCATCACAGCGCGGACGAGTCGGACGAAGACGGAAAGTTGTACC
CGGTTAGCCCGTTTCCACCACCGCAAACCACCACACGATCTATATATTCA
CAGCGTAGTGTCAGTTTATCAGAACTCTCTTTCGAACGTACACAGGACCT
TGGTGACGAGGATGAAAAATTACTCGAAGACATGATGGAATACGATCGAA
TCGATGTTCAAAACGATTTAATCGAATCGATCGATTCGATAACGGATATC
GAGGATAACGATTCACCACCACCTGTTGATATCAACGACCCAGATTCTAA
AGGTAATTTATTTAAagtgattatttttttttcttaaaagattTTTGGTG
ACCTTTccctttttgaatttcaaaaaaaataatgggACTACTCTCACTTA
TTctaacttctattattcgaatctttctataattcgaacttatttcTAGT
CCTCGTCAAAGAGAAACCCTCTTGATAGAAATACTTTCCATAACTCTAAT
CtccctgtaattcgaacaagtaAGATTCCCTATTCGAATTCGAATTAGCG
AGTGTCAATTGTAGAATTTACCTACCTATTCACGTGTGATTCAttcagat
tttcttttttttttctagcCATCCCTACTccaaaacgaaaacgaaagaaG
AAAACACGCAACAGTTATCCAAGTTCACCCAGCAGTTCCGATTTGGAAGG
ACGACCGGTCAACACCAAAGATTCTGCCGCTCCGGAAGCCATTCGCGACC
GGTTACGGTACTTAGCGGACAGTTGGGCTGGTGTTGTTTTACCTGAAAAA
TGTGGTCAAATCCAATCACTAGCCTGCTCGTCACAATTAGTTTGGTTGAT
TGACAACCTGGATCAAGTCTATTACTCGCCTGCTGTTTCTACTCACGTGT
ACACGTGGAAGAGACTGGATACTAAAGACAGTAAAGCGATGCATATCGCA
ACCAATCAGAATGGATCCATTGTGTGGTGTATTGACCGAAACAATGTGGC
CCATTATCGTGTTGGCATCAAAGAGTCGACACCCCAAGGTAGGActaaac
gcttttttttaattacCTTTTTAAAGTTGCAATTACAACCCAAACATCAT
ATTTCGTATTACAAAGATTTTGTCTTGAATTCCGAGGCTACAGTTTTAAT
TTGTTATAAGACCAGTCtatgtcttcaaaaaaattcaaattattttgacg
aattttcagTATAAGTCAGCTTAACATCCCTTTGGACCTTTGAAGCAGTG
ATGTTTTGAACACAATTATCAATTCTACTATGACAGGTGTACAATGGGAG
CCTTTCGAGAAGAACGTCCATTACATAGCAGTGGACAAAGATAGCGTGTG
GATGATCAAAAAGAATGGAGATGTCTTTGTACGCACTGGTGTTTCCAACC
AACGTCCATCGGGCACCACTTGGATAACCATCAAAGCTAACAGTGATCTT
GTACAAATCTCTTGTACTGATGGTATTGTTTGGGCACTCGATATCTATAA
CCACGTTCAAATCTTCCAAGGTATTTTATTATACTGTTCACAGTATCCAA
GTTCTCGCAATTCAAAGAATTTCCTCACCTAAATGTAAATATTAATAAtg
tcttttcttttcttattttgctTTCTTTCTATTTTATAAGTTTCCAAGAG
TTTTCTGTTTATCTATGTAGGATGATCAAGATTGTCTTGTTTTACATTGA
TTAGCATTGCCTTTTTTCACCTGTTTGGAAGCCGTATTTATACTGTCTAT
CATGTATCTTCCAGGTGACTTGCGAACATTGAGTGTGTCCAACCCTGCCG
ATCATGATTTATCATGGGTCGAACTACCCGGAATCGCCGCTAGCCATGTC
ACCTTAGGATCGAAAGCTGTTTGCTGGATCATTGATAAAGACAATCAAGT
CTGGTTCAACCAAGACGTCTCGCGTGAAAACCCGGCTGGCGGAAATTGGT
ACCAACTCTCTTTGGGGGAGAACAGATCAGAGAGCGCGGATTGGTTCTCT
TCAGTTTTGTCCTATTTCACTAAGGGCAACGAGCCAAAACAAATCATGGC
CAATGACATGGCTGGTGTTTTGATTCTCGGCAAACAAGGTTCAATACATG
TTGCTCATGGTCATTTATTGGGTACCACATGGCAATCTGCAGTTCCGACA
CAAATCAAATCAAGCGGCTGTTGGACCTGTATTTCAGCTGGTGGAGCTGA
TATGAATAAAGGTTACGTATGGACCTTACAACCGAACGGACAACTCGTAT
GTTTCAAGTCCGGTCGACAAACTTATAATGTTCATCCGCCGAACCGTGTT
GTGTTGAAGTACTGTTCCGCTGGTCCGCGTTCGCTGTGGGCTTTGACTTC
CGGACAAGATGTTTATGTCCGGTTAGGTATTTCGGATACTTGTCCGCAAG
GTTTAAAGTGGTTGAAAGTTGACATGTTAGCACAAGGGAACCGTCGTCTT
ATGAACATATCAGCTGGAAATCATGTCGTATGGGCGGTCGATTTCGAAGG
AAACGCTTGGTTCCAGATGGGACGTGAGGATCGGCGAGGGGCGGGTTACG
CCCCTGCTTGGGTTCCAGTCGAAGGATGTCCGCTTGACGGAAGCAAATTT
ACAAAGATTGTTGTAGGGCCGGATGATTTAATTGTATGGGCGTGTGACAA
CAAGAATAACGTCTATGCTAGGAAAGATATTACGGAAAACTTTTGGGTCG
GTACTTCTTGGGAGGTTGTGTCTGGTACCAGTGGTAAGGACATAGCGATC
AGCAATAACCACGTGTGGAGCTTATGTCCTAACGGGGACGTCTTATGCAG
GTTTGGCGTGTCACCCAACAACGTTTGTGGTGACTACTGGAAAAAAGTTC
CCggaaatttcgagaaaatcagcgTCAGTGCTAATGATGAATTATGGGGT
ATCGATCGCTTTGGACATTTATACCAACGCGAGACTTTATTGTTTTATGG
GAACTCTCTTTCATGTCGGGCACCATCTTATGATGATCTGTTCTCTGATC
ATAACGATTGGGAATTCATCTAATCTAGATGGAGCTTTATCGATCGTATA
CTTTTGACACTACTGTACACCTAACACCGCGCACCCtatgctttcatttt
tataacacTATTTACACTGTGCaacaaaactatttttgatactAATCATA
CAACGACAGCATATATACACAATCGTCTCACCAAAACgcgttttttcctt
ttttcgctttcgttttttaaCTAATGCTACCTCTTTGTCAAATTAAATAC
ATTTATAttaatatattttaattttcatattttttttccgtttattgaaa
atcggtactattttttaaaaggttttacatctttttcaatttcaacaggT
TTAAGTTGTAAAATTTAAACTTCATAggagtttgaaaaagaaacgaGTAG
CTAgtctggagtttttaatttaaagtatattattttaataattatttttt
tctttgtttgcatGCGACGGGGGTATACAAAGTTTAAGAGATTTAATGCT
TTAAAGGGGGTGCTTATTGGCAGGGGGTCATTTAGAATATcatatttttt
agatttatttaTGAGTAGGAACTTTAcgtcttttcattttcttttttaca
ttcAATTTTACGGCTACCTcgacttttttttttcaactttcagcGCTTAT
TTAAAACTCAANattttcatttctttttacattcaattTTACGGCTCCCT
CgactatgttttttttttcaactctcAGCGCTTATTTAAAACTCAAGGCA
TCTGTAATTACAAATTTTGGTTCTAAGTACAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029143TCONS_00029143Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029143-proteinTCONS_00029143-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000726supercontigsc0000726:165320..169501 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.52	5.83	26.64	29.43	42.46	30.68	22.35	26.62	15.92	23.51	17.02	12.62	19.3	15.38	16.86	27.43	14.23	15.69	19.65	30.35	6.61	7.61	7.52	9.62	9.57	10.02	34.43	29.18	10.23	9.75