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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029143 ID=TCONS_00029143|Name=TCONS_00029143|organism=Clytia hemisphaerica|type=transcript|length=3374bp
ATATCGAGCCACGGCAGACGCGTGTTAAAAACGTTCGTCCACAACGTCAA
ATATCGAGTAGTTCAGATGACGAAGGAACTTATGTAAACCACAGGACTAG
TTTAAATCTCTCACTCGACGACGAAGATCCTTATACCAATCGACCAAGTC
CTTTAACCGCCGCTCCTTCAACGAAACCTAAACTCGTCGCTGATTCTAGT
TTTGATATGAACGTCGTTAACGTTAAAATCTCACACAAACGTCAAGGTTC
GAATGTTAGTATTGCTTCACTCACAGAACGATGCCGTGAAATCAAGGGCG
AAGCAATAGAACATAACACTACGCCCAAAAAAGCACCAATCTCCGCCAAC
GATGATAGCTTAGAAGCACATCTTCAACCGCATCACGAACCGCTGACGGT
TGAGCATCATCACAGCGCGGACGAGTCGGACGAAGACGGAAAGTTGTACC
CGGTTAGCCCGTTTCCACCACCGCAAACCACCACACGATCTATATATTCA
CAGCGTAGTGTCAGTTTATCAGAACTCTCTTTCGAACGTACACAGGACCT
TGGTGACGAGGATGAAAAATTACTCGAAGACATGATGGAATACGATCGAA
TCGATGTTCAAAACGATTTAATCGAATCGATCGATTCGATAACGGATATC
GAGGATAACGATTCACCACCACCTGTTGATATCAACGACCCAGATTCTAA
AGcCATCCCTACTccaaaacgaaaacgaaagaaGAAAACACGCAACAGTT
ATCCAAGTTCACCCAGCAGTTCCGATTTGGAAGGACGACCGGTCAACACC
AAAGATTCTGCCGCTCCGGAAGCCATTCGCGACCGGTTACGGTACTTAGC
GGACAGTTGGGCTGGTGTTGTTTTACCTGAAAAATGTGGTCAAATCCAAT
CACTAGCCTGCTCGTCACAATTAGTTTGGTTGATTGACAACCTGGATCAA
GTCTATTACTCGCCTGCTGTTTCTACTCACGTGTACACGTGGAAGAGACT
GGATACTAAAGACAGTAAAGCGATGCATATCGCAACCAATCAGAATGGAT
CCATTGTGTGGTGTATTGACCGAAACAATGTGGCCCATTATCGTGTTGGC
ATCAAAGAGTCGACACCCCAAGGTGTACAATGGGAGCCTTTCGAGAAGAA
CGTCCATTACATAGCAGTGGACAAAGATAGCGTGTGGATGATCAAAAAGA
ATGGAGATGTCTTTGTACGCACTGGTGTTTCCAACCAACGTCCATCGGGC
ACCACTTGGATAACCATCAAAGCTAACAGTGATCTTGTACAAATCTCTTG
TACTGATGGTATTGTTTGGGCACTCGATATCTATAACCACGTTCAAATCT
TCCAAGGTGACTTGCGAACATTGAGTGTGTCCAACCCTGCCGATCATGAT
TTATCATGGGTCGAACTACCCGGAATCGCCGCTAGCCATGTCACCTTAGG
ATCGAAAGCTGTTTGCTGGATCATTGATAAAGACAATCAAGTCTGGTTCA
ACCAAGACGTCTCGCGTGAAAACCCGGCTGGCGGAAATTGGTACCAACTC
TCTTTGGGGGAGAACAGATCAGAGAGCGCGGATTGGTTCTCTTCAGTTTT
GTCCTATTTCACTAAGGGCAACGAGCCAAAACAAATCATGGCCAATGACA
TGGCTGGTGTTTTGATTCTCGGCAAACAAGGTTCAATACATGTTGCTCAT
GGTCATTTATTGGGTACCACATGGCAATCTGCAGTTCCGACACAAATCAA
ATCAAGCGGCTGTTGGACCTGTATTTCAGCTGGTGGAGCTGATATGAATA
AAGGTTACGTATGGACCTTACAACCGAACGGACAACTCGTATGTTTCAAG
TCCGGTCGACAAACTTATAATGTTCATCCGCCGAACCGTGTTGTGTTGAA
GTACTGTTCCGCTGGTCCGCGTTCGCTGTGGGCTTTGACTTCCGGACAAG
ATGTTTATGTCCGGTTAGGTATTTCGGATACTTGTCCGCAAGGTTTAAAG
TGGTTGAAAGTTGACATGTTAGCACAAGGGAACCGTCGTCTTATGAACAT
ATCAGCTGGAAATCATGTCGTATGGGCGGTCGATTTCGAAGGAAACGCTT
GGTTCCAGATGGGACGTGAGGATCGGCGAGGGGCGGGTTACGCCCCTGCT
TGGGTTCCAGTCGAAGGATGTCCGCTTGACGGAAGCAAATTTACAAAGAT
TGTTGTAGGGCCGGATGATTTAATTGTATGGGCGTGTGACAACAAGAATA
ACGTCTATGCTAGGAAAGATATTACGGAAAACTTTTGGGTCGGTACTTCT
TGGGAGGTTGTGTCTGGTACCAGTGGTAAGGACATAGCGATCAGCAATAA
CCACGTGTGGAGCTTATGTCCTAACGGGGACGTCTTATGCAGGTTTGGCG
TGTCACCCAACAACGTTTGTGGTGACTACTGGAAAAAAGTTCCCggaaat
ttcgagaaaatcagcgTCAGTGCTAATGATGAATTATGGGGTATCGATCG
CTTTGGACATTTATACCAACGCGAGACTTTATTGTTTTATGGGAACTCTC
TTTCATGTCGGGCACCATCTTATGATGATCTGTTCTCTGATCATAACGAT
TGGGAATTCATCTAATCTAGATGGAGCTTTATCGATCGTATACTTTTGAC
ACTACTGTACACCTAACACCGCGCACCCtatgctttcatttttataacac
TATTTACACTGTGCaacaaaactatttttgatactAATCATACAACGACA
GCATATATACACAATCGTCTCACCAAAACgcgttttttccttttttcgct
ttcgttttttaaCTAATGCTACCTCTTTGTCAAATTAAATACATTTATAt
taatatattttaattttcatattttttttccgtttattgaaaatcggtac
tattttttaaaaggttttacatctttttcaatttcaacaggTTTAAGTTG
TAAAATTTAAACTTCATAggagtttgaaaaagaaacgaGTAGCTAgtctg
gagtttttaatttaaagtatattattttaataattatttttttctttgtt
tgcatGCGACGGGGGTATACAAAGTTTAAGAGATTTAATGCTTTAAAGGG
GGTGCTTATTGGCAGGGGGTCATTTAGAATATcatattttttagatttat
ttaTGAGTAGGAACTTTAcgtcttttcattttcttttttacattcAATTT
TACGGCTACCTcgacttttttttttcaactttcagcGCTTATTTAAAACT
CAANattttcatttctttttacattcaattTTACGGCTCCCTCgactatg
ttttttttttcaactctcAGCGCTTATTTAAAACTCAAGGCATCTGTAAT
TACAAATTTTGGTTCTAAGTACAC Run BLAST on NCBI protein sequence of TCONS_00029143-protein >TCONS_00029143-protein ID=TCONS_00029143-protein|Name=TCONS_00029143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=870bp
IEPRQTRVKNVRPQRQISSSSDDEGTYVNHRTSLNLSLDDEDPYTNRPSP
LTAAPSTKPKLVADSSFDMNVVNVKISHKRQGSNVSIASLTERCREIKGE
AIEHNTTPKKAPISANDDSLEAHLQPHHEPLTVEHHHSADESDEDGKLYP
VSPFPPPQTTTRSIYSQRSVSLSELSFERTQDLGDEDEKLLEDMMEYDRI
DVQNDLIESIDSITDIEDNDSPPPVDINDPDSKAIPTPKRKRKKKTRNSY
PSSPSSSDLEGRPVNTKDSAAPEAIRDRLRYLADSWAGVVLPEKCGQIQS
LACSSQLVWLIDNLDQVYYSPAVSTHVYTWKRLDTKDSKAMHIATNQNGS
IVWCIDRNNVAHYRVGIKESTPQGVQWEPFEKNVHYIAVDKDSVWMIKKN
GDVFVRTGVSNQRPSGTTWITIKANSDLVQISCTDGIVWALDIYNHVQIF
QGDLRTLSVSNPADHDLSWVELPGIAASHVTLGSKAVCWIIDKDNQVWFN
QDVSRENPAGGNWYQLSLGENRSESADWFSSVLSYFTKGNEPKQIMANDM
AGVLILGKQGSIHVAHGHLLGTTWQSAVPTQIKSSGCWTCISAGGADMNK
GYVWTLQPNGQLVCFKSGRQTYNVHPPNRVVLKYCSAGPRSLWALTSGQD
VYVRLGISDTCPQGLKWLKVDMLAQGNRRLMNISAGNHVVWAVDFEGNAW
FQMGREDRRGAGYAPAWVPVEGCPLDGSKFTKIVVGPDDLIVWACDNKNN
VYARKDITENFWVGTSWEVVSGTSGKDIAISNNHVWSLCPNGDVLCRFGV
SPNNVCGDYWKKVPGNFEKISVSANDELWGIDRFGHLYQRETLLFYGNSL
SCRAPSYDDLFSDHNDWEFI Run BLAST on NCBI transcript from alignment at sc0000726:165320..169501+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029143 ID=TCONS_00029143|Name=TCONS_00029143|organism=Clytia hemisphaerica|type=transcript|length=4182bp|location=Sequence derived from alignment at sc0000726:165320..169501+ (Clytia hemisphaerica)
ATATCGAGCCACGGCAGACGCGTGTTAAAAACGTTCGTCCACAACGTCAA
ATATCGAGTAGTTCAGATGACGAAGGAACTTATGTAAACCACAGGACTAG
TTTAAATCTCTCACTCGACGACGAAGATCCTTATACCAATCGACCAAGTC
CTTTAACCGCCGCTCCTTCAACGAAACCTAAACTCGTCGCTGATTCTAGT
TTTGATATGAACGTCGTTAACGTTAAAATCTCACACAAACGTCAAGGTTC
GAATGTTAGTATTGCTTCACTCACAGAACGATGCCGTGAAATCAAGGGCG
AAGCAATAGAACATAACACTACGCCCAAAAAAGCACCAATCTCCGCCAAC
GATGATAGCTTAGAAGCACATCTTCAACCGCATCACGAACCGCTGACGGT
TGAGCATCATCACAGCGCGGACGAGTCGGACGAAGACGGAAAGTTGTACC
CGGTTAGCCCGTTTCCACCACCGCAAACCACCACACGATCTATATATTCA
CAGCGTAGTGTCAGTTTATCAGAACTCTCTTTCGAACGTACACAGGACCT
TGGTGACGAGGATGAAAAATTACTCGAAGACATGATGGAATACGATCGAA
TCGATGTTCAAAACGATTTAATCGAATCGATCGATTCGATAACGGATATC
GAGGATAACGATTCACCACCACCTGTTGATATCAACGACCCAGATTCTAA
AGGTAATTTATTTAAagtgattatttttttttcttaaaagattTTTGGTG
ACCTTTccctttttgaatttcaaaaaaaataatgggACTACTCTCACTTA
TTctaacttctattattcgaatctttctataattcgaacttatttcTAGT
CCTCGTCAAAGAGAAACCCTCTTGATAGAAATACTTTCCATAACTCTAAT
CtccctgtaattcgaacaagtaAGATTCCCTATTCGAATTCGAATTAGCG
AGTGTCAATTGTAGAATTTACCTACCTATTCACGTGTGATTCAttcagat
tttcttttttttttctagcCATCCCTACTccaaaacgaaaacgaaagaaG
AAAACACGCAACAGTTATCCAAGTTCACCCAGCAGTTCCGATTTGGAAGG
ACGACCGGTCAACACCAAAGATTCTGCCGCTCCGGAAGCCATTCGCGACC
GGTTACGGTACTTAGCGGACAGTTGGGCTGGTGTTGTTTTACCTGAAAAA
TGTGGTCAAATCCAATCACTAGCCTGCTCGTCACAATTAGTTTGGTTGAT
TGACAACCTGGATCAAGTCTATTACTCGCCTGCTGTTTCTACTCACGTGT
ACACGTGGAAGAGACTGGATACTAAAGACAGTAAAGCGATGCATATCGCA
ACCAATCAGAATGGATCCATTGTGTGGTGTATTGACCGAAACAATGTGGC
CCATTATCGTGTTGGCATCAAAGAGTCGACACCCCAAGGTAGGActaaac
gcttttttttaattacCTTTTTAAAGTTGCAATTACAACCCAAACATCAT
ATTTCGTATTACAAAGATTTTGTCTTGAATTCCGAGGCTACAGTTTTAAT
TTGTTATAAGACCAGTCtatgtcttcaaaaaaattcaaattattttgacg
aattttcagTATAAGTCAGCTTAACATCCCTTTGGACCTTTGAAGCAGTG
ATGTTTTGAACACAATTATCAATTCTACTATGACAGGTGTACAATGGGAG
CCTTTCGAGAAGAACGTCCATTACATAGCAGTGGACAAAGATAGCGTGTG
GATGATCAAAAAGAATGGAGATGTCTTTGTACGCACTGGTGTTTCCAACC
AACGTCCATCGGGCACCACTTGGATAACCATCAAAGCTAACAGTGATCTT
GTACAAATCTCTTGTACTGATGGTATTGTTTGGGCACTCGATATCTATAA
CCACGTTCAAATCTTCCAAGGTATTTTATTATACTGTTCACAGTATCCAA
GTTCTCGCAATTCAAAGAATTTCCTCACCTAAATGTAAATATTAATAAtg
tcttttcttttcttattttgctTTCTTTCTATTTTATAAGTTTCCAAGAG
TTTTCTGTTTATCTATGTAGGATGATCAAGATTGTCTTGTTTTACATTGA
TTAGCATTGCCTTTTTTCACCTGTTTGGAAGCCGTATTTATACTGTCTAT
CATGTATCTTCCAGGTGACTTGCGAACATTGAGTGTGTCCAACCCTGCCG
ATCATGATTTATCATGGGTCGAACTACCCGGAATCGCCGCTAGCCATGTC
ACCTTAGGATCGAAAGCTGTTTGCTGGATCATTGATAAAGACAATCAAGT
CTGGTTCAACCAAGACGTCTCGCGTGAAAACCCGGCTGGCGGAAATTGGT
ACCAACTCTCTTTGGGGGAGAACAGATCAGAGAGCGCGGATTGGTTCTCT
TCAGTTTTGTCCTATTTCACTAAGGGCAACGAGCCAAAACAAATCATGGC
CAATGACATGGCTGGTGTTTTGATTCTCGGCAAACAAGGTTCAATACATG
TTGCTCATGGTCATTTATTGGGTACCACATGGCAATCTGCAGTTCCGACA
CAAATCAAATCAAGCGGCTGTTGGACCTGTATTTCAGCTGGTGGAGCTGA
TATGAATAAAGGTTACGTATGGACCTTACAACCGAACGGACAACTCGTAT
GTTTCAAGTCCGGTCGACAAACTTATAATGTTCATCCGCCGAACCGTGTT
GTGTTGAAGTACTGTTCCGCTGGTCCGCGTTCGCTGTGGGCTTTGACTTC
CGGACAAGATGTTTATGTCCGGTTAGGTATTTCGGATACTTGTCCGCAAG
GTTTAAAGTGGTTGAAAGTTGACATGTTAGCACAAGGGAACCGTCGTCTT
ATGAACATATCAGCTGGAAATCATGTCGTATGGGCGGTCGATTTCGAAGG
AAACGCTTGGTTCCAGATGGGACGTGAGGATCGGCGAGGGGCGGGTTACG
CCCCTGCTTGGGTTCCAGTCGAAGGATGTCCGCTTGACGGAAGCAAATTT
ACAAAGATTGTTGTAGGGCCGGATGATTTAATTGTATGGGCGTGTGACAA
CAAGAATAACGTCTATGCTAGGAAAGATATTACGGAAAACTTTTGGGTCG
GTACTTCTTGGGAGGTTGTGTCTGGTACCAGTGGTAAGGACATAGCGATC
AGCAATAACCACGTGTGGAGCTTATGTCCTAACGGGGACGTCTTATGCAG
GTTTGGCGTGTCACCCAACAACGTTTGTGGTGACTACTGGAAAAAAGTTC
CCggaaatttcgagaaaatcagcgTCAGTGCTAATGATGAATTATGGGGT
ATCGATCGCTTTGGACATTTATACCAACGCGAGACTTTATTGTTTTATGG
GAACTCTCTTTCATGTCGGGCACCATCTTATGATGATCTGTTCTCTGATC
ATAACGATTGGGAATTCATCTAATCTAGATGGAGCTTTATCGATCGTATA
CTTTTGACACTACTGTACACCTAACACCGCGCACCCtatgctttcatttt
tataacacTATTTACACTGTGCaacaaaactatttttgatactAATCATA
CAACGACAGCATATATACACAATCGTCTCACCAAAACgcgttttttcctt
ttttcgctttcgttttttaaCTAATGCTACCTCTTTGTCAAATTAAATAC
ATTTATAttaatatattttaattttcatattttttttccgtttattgaaa
atcggtactattttttaaaaggttttacatctttttcaatttcaacaggT
TTAAGTTGTAAAATTTAAACTTCATAggagtttgaaaaagaaacgaGTAG
CTAgtctggagtttttaatttaaagtatattattttaataattatttttt
tctttgtttgcatGCGACGGGGGTATACAAAGTTTAAGAGATTTAATGCT
TTAAAGGGGGTGCTTATTGGCAGGGGGTCATTTAGAATATcatatttttt
agatttatttaTGAGTAGGAACTTTAcgtcttttcattttcttttttaca
ttcAATTTTACGGCTACCTcgacttttttttttcaactttcagcGCTTAT
TTAAAACTCAANattttcatttctttttacattcaattTTACGGCTCCCT
CgactatgttttttttttcaactctcAGCGCTTATTTAAAACTCAAGGCA
TCTGTAATTACAAATTTTGGTTCTAAGTACAC Coding sequence (CDS) from alignment at sc0000726:165320..169501+ >TCONS_00029143 ID=TCONS_00029143|Name=TCONS_00029143|organism=Clytia hemisphaerica|type=CDS|length=10452bp|location=Sequence derived from alignment at sc0000726:165320..169501+ (Clytia hemisphaerica)
ATCGAGCCACGGCAGACGCGTGTTAAAAACGTTCGTCCACAACGTCAAAT
ATCGAGTAGTTCAGATGACGAAGGAACTTATGTAAACCACAGGACTAGTT
TAAATCTCTCACTCGACGACGAAGATCCTTATACCAATCGACCAAGTCCT
TTAACCGCCGCTCCTTCAACGAAACCTAAACTCGTCGCTGATTCTAGTTT
TGATATGAACGTCGTTAACGTTAAAATCTCACACAAACGTCAAGGTTCGA
ATGTTAGTATTGCTTCACTCACAGAACGATGCCGTGAAATCAAGGGCGAA
GCAATAGAACATAACACTACGCCCAAAAAAGCACCAATCTCCGCCAACGA
TGATAGCTTAGAAGCACATCTTCAACCGCATCACGAACCGCTGACGGTTG
AGCATCATCACAGCGCGGACGAGTCGGACGAAGACGGAAAGTTGTACCCG
GTTAGCCCGTTTCCACCACCGCAAACCACCACACGATCTATATATTCACA
GCGTAGTGTCAGTTTATCAGAACTCTCTTTCGAACGTACACAGGACCTTG
GTGACGAGGATGAAAAATTACTCGAAGACATGATGGAATACGATCGAATC
GATGTTCAAAACGATTTAATCGAATCGATCGATTCGATAACGGATATCGA
GGATAACGATTCACCACCACCTGTTGATATCAACGACCCAGATTCTAAAG
cCATCCCTACTccaaaacgaaaacgaaagaaGAAAACACGCAACAGTTAT
CCAAGTTCACCCAGCAGTTCCGATTTGGAAGGACGACCGGTCAACACCAA
AGATTCTGCCGCTCCGGAAGCCATTCGCGACCGGTTACGGTACTTAGCGG
ACAGTTGGGCTGGTGTTGTTTTACCTGAAAAATGTGGTCAAATCCAATCA
CTAGCCTGCTCGTCACAATTAGTTTGGTTGATTGACAACCTGGATCAAGT
CTATTACTCGCCTGCTGTTTCTACTCACGTGTACACGTGGAAGAGACTGG
ATACTAAAGACAGTAAAGCGATGCATATCGCAACCAATCAGAATGGATCC
ATTGTGTGGTGTATTGACCGAAACAATGTGGCCCATTATCGTGTTGGCAT
CAAAGAGTCGACACCCCAAGGTGTACAATGGGAGCCTTTCGAGAAGAACG
TCCATTACATAGCAGTGGACAAAGATAGCGTGTGGATGATCAAAAAGAAT
GGAGATGTCTTTGTACGCACTGGTGTTTCCAACCAACGTCCATCGGGCAC
CACTTGGATAACCATCAAAGCTAACAGTGATCTTGTACAAATCTCTTGTA
CTGATGGTATTGTTTGGGCACTCGATATCTATAACCACGTTCAAATCTTC
CAAGGTGACTTGCGAACATTGAGTGTGTCCAACCCTGCCGATCATGATTT
ATCATGGGTCGAACTACCCGGAATCGCCGCTAGCCATGTCACCTTAGGAT
CGAAAGCTGTTTGCTGGATCATTGATAAAGACAATCAAGTCTGGTTCAAC
CAAGACGTCTCGCGTGAAAACCCGGCTGGCGGAAATTGGTACCAACTCTC
TTTGGGGGAGAACAGATCAGAGAGCGCGGATTGGTTCTCTTCAGTTTTGT
CCTATTTCACTAAGGGCAACGAGCCAAAACAAATCATGGCCAATGACATG
GCTGGTGTTTTGATTCTCGGCAAACAAGGTTCAATACATGTTGCTCATGG
TCATTTATTGGGTACCACATGGCAATCTGCAGTTCCGACACAAATCAAAT
CAAGCGGCTGTTGGACCTGTATTTCAGCTGGTGGAGCTGATATGAATAAA
GGTTACGTATGGACCTTACAACCGAACGGACAACTCGTATGTTTCAAGTC
CGGTCGACAAACTTATAATGTTCATCCGCCGAACCGTGTTGTGTTGAAGT
ACTGTTCCGCTGGTCCGCGTTCGCTGTGGGCTTTGACTTCCGGACAAGAT
GTTTATGTCCGGTTAGGTATTTCGGATACTTGTCCGCAAGGTTTAAAGTG
GTTGAAAGTTGACATGTTAGCACAAGGGAACCGTCGTCTTATGAACATAT
CAGCTGGAAATCATGTCGTATGGGCGGTCGATTTCGAAGGAAACGCTTGG
TTCCAGATGGGACGTGAGGATCGGCGAGGGGCGGGTTACGCCCCTGCTTG
GGTTCCAGTCGAAGGATGTCCGCTTGACGGAAGCAAATTTACAAAGATTG
TTGTAGGGCCGGATGATTTAATTGTATGGGCGTGTGACAACAAGAATAAC
GTCTATGCTAGGAAAGATATTACGGAAAACTTTTGGGTCGGTACTTCTTG
GGAGGTTGTGTCTGGTACCAGTGGTAAGGACATAGCGATCAGCAATAACC
ACGTGTGGAGCTTATGTCCTAACGGGGACGTCTTATGCAGGTTTGGCGTG
TCACCCAACAACGTTTGTGGTGACTACTGGAAAAAAGTTCCCggaaattt
cgagaaaatcagcgTCAGTGCTAATGATGAATTATGGGGTATCGATCGCT
TTGGACATTTATACCAACGCGAGACTTTATTGTTTTATGGGAACTCTCTT
TCATGTCGGGCACCATCTTATGATGATCTGTTCTCTGATCATAACGATTG
GGAATTCATCTAAATCGAGCCACGGCAGACGCGTGTTAAAAACGTTCGTC
CACAACGTCAAATATCGAGTAGTTCAGATGACGAAGGAACTTATGTAAAC
CACAGGACTAGTTTAAATCTCTCACTCGACGACGAAGATCCTTATACCAA
TCGACCAAGTCCTTTAACCGCCGCTCCTTCAACGAAACCTAAACTCGTCG
CTGATTCTAGTTTTGATATGAACGTCGTTAACGTTAAAATCTCACACAAA
CGTCAAGGTTCGAATGTTAGTATTGCTTCACTCACAGAACGATGCCGTGA
AATCAAGGGCGAAGCAATAGAACATAACACTACGCCCAAAAAAGCACCAA
TCTCCGCCAACGATGATAGCTTAGAAGCACATCTTCAACCGCATCACGAA
CCGCTGACGGTTGAGCATCATCACAGCGCGGACGAGTCGGACGAAGACGG
AAAGTTGTACCCGGTTAGCCCGTTTCCACCACCGCAAACCACCACACGAT
CTATATATTCACAGCGTAGTGTCAGTTTATCAGAACTCTCTTTCGAACGT
ACACAGGACCTTGGTGACGAGGATGAAAAATTACTCGAAGACATGATGGA
ATACGATCGAATCGATGTTCAAAACGATTTAATCGAATCGATCGATTCGA
TAACGGATATCGAGGATAACGATTCACCACCACCTGTTGATATCAACGAC
CCAGATTCTAAAGcCATCCCTACTccaaaacgaaaacgaaagaaGAAAAC
ACGCAACAGTTATCCAAGTTCACCCAGCAGTTCCGATTTGGAAGGACGAC
CGGTCAACACCAAAGATTCTGCCGCTCCGGAAGCCATTCGCGACCGGTTA
CGGTACTTAGCGGACAGTTGGGCTGGTGTTGTTTTACCTGAAAAATGTGG
TCAAATCCAATCACTAGCCTGCTCGTCACAATTAGTTTGGTTGATTGACA
ACCTGGATCAAGTCTATTACTCGCCTGCTGTTTCTACTCACGTGTACACG
TGGAAGAGACTGGATACTAAAGACAGTAAAGCGATGCATATCGCAACCAA
TCAGAATGGATCCATTGTGTGGTGTATTGACCGAAACAATGTGGCCCATT
ATCGTGTTGGCATCAAAGAGTCGACACCCCAAGGTGTACAATGGGAGCCT
TTCGAGAAGAACGTCCATTACATAGCAGTGGACAAAGATAGCGTGTGGAT
GATCAAAAAGAATGGAGATGTCTTTGTACGCACTGGTGTTTCCAACCAAC
GTCCATCGGGCACCACTTGGATAACCATCAAAGCTAACAGTGATCTTGTA
CAAATCTCTTGTACTGATGGTATTGTTTGGGCACTCGATATCTATAACCA
CGTTCAAATCTTCCAAGGTGACTTGCGAACATTGAGTGTGTCCAACCCTG
CCGATCATGATTTATCATGGGTCGAACTACCCGGAATCGCCGCTAGCCAT
GTCACCTTAGGATCGAAAGCTGTTTGCTGGATCATTGATAAAGACAATCA
AGTCTGGTTCAACCAAGACGTCTCGCGTGAAAACCCGGCTGGCGGAAATT
GGTACCAACTCTCTTTGGGGGAGAACAGATCAGAGAGCGCGGATTGGTTC
TCTTCAGTTTTGTCCTATTTCACTAAGGGCAACGAGCCAAAACAAATCAT
GGCCAATGACATGGCTGGTGTTTTGATTCTCGGCAAACAAGGTTCAATAC
ATGTTGCTCATGGTCATTTATTGGGTACCACATGGCAATCTGCAGTTCCG
ACACAAATCAAATCAAGCGGCTGTTGGACCTGTATTTCAGCTGGTGGAGC
TGATATGAATAAAGGTTACGTATGGACCTTACAACCGAACGGACAACTCG
TATGTTTCAAGTCCGGTCGACAAACTTATAATGTTCATCCGCCGAACCGT
GTTGTGTTGAAGTACTGTTCCGCTGGTCCGCGTTCGCTGTGGGCTTTGAC
TTCCGGACAAGATGTTTATGTCCGGTTAGGTATTTCGGATACTTGTCCGC
AAGGTTTAAAGTGGTTGAAAGTTGACATGTTAGCACAAGGGAACCGTCGT
CTTATGAACATATCAGCTGGAAATCATGTCGTATGGGCGGTCGATTTCGA
AGGAAACGCTTGGTTCCAGATGGGACGTGAGGATCGGCGAGGGGCGGGTT
ACGCCCCTGCTTGGGTTCCAGTCGAAGGATGTCCGCTTGACGGAAGCAAA
TTTACAAAGATTGTTGTAGGGCCGGATGATTTAATTGTATGGGCGTGTGA
CAACAAGAATAACGTCTATGCTAGGAAAGATATTACGGAAAACTTTTGGG
TCGGTACTTCTTGGGAGGTTGTGTCTGGTACCAGTGGTAAGGACATAGCG
ATCAGCAATAACCACGTGTGGAGCTTATGTCCTAACGGGGACGTCTTATG
CAGGTTTGGCGTGTCACCCAACAACGTTTGTGGTGACTACTGGAAAAAAG
TTCCCggaaatttcgagaaaatcagcgTCAGTGCTAATGATGAATTATGG
GGTATCGATCGCTTTGGACATTTATACCAACGCGAGACTTTATTGTTTTA
TGGGAACTCTCTTTCATGTCGGGCACCATCTTATGATGATCTGTTCTCTG
ATCATAACGATTGGGAATTCATCTAAATCGAGCCACGGCAGACGCGTGTT
AAAAACGTTCGTCCACAACGTCAAATATCGAGTAGTTCAGATGACGAAGG
AACTTATGTAAACCACAGGACTAGTTTAAATCTCTCACTCGACGACGAAG
ATCCTTATACCAATCGACCAAGTCCTTTAACCGCCGCTCCTTCAACGAAA
CCTAAACTCGTCGCTGATTCTAGTTTTGATATGAACGTCGTTAACGTTAA
AATCTCACACAAACGTCAAGGTTCGAATGTTAGTATTGCTTCACTCACAG
AACGATGCCGTGAAATCAAGGGCGAAGCAATAGAACATAACACTACGCCC
AAAAAAGCACCAATCTCCGCCAACGATGATAGCTTAGAAGCACATCTTCA
ACCGCATCACGAACCGCTGACGGTTGAGCATCATCACAGCGCGGACGAGT
CGGACGAAGACGGAAAGTTGTACCCGGTTAGCCCGTTTCCACCACCGCAA
ACCACCACACGATCTATATATTCACAGCGTAGTGTCAGTTTATCAGAACT
CTCTTTCGAACGTACACAGGACCTTGGTGACGAGGATGAAAAATTACTCG
AAGACATGATGGAATACGATCGAATCGATGTTCAAAACGATTTAATCGAA
TCGATCGATTCGATAACGGATATCGAGGATAACGATTCACCACCACCTGT
TGATATCAACGACCCAGATTCTAAAGcCATCCCTACTccaaaacgaaaac
gaaagaaGAAAACACGCAACAGTTATCCAAGTTCACCCAGCAGTTCCGAT
TTGGAAGGACGACCGGTCAACACCAAAGATTCTGCCGCTCCGGAAGCCAT
TCGCGACCGGTTACGGTACTTAGCGGACAGTTGGGCTGGTGTTGTTTTAC
CTGAAAAATGTGGTCAAATCCAATCACTAGCCTGCTCGTCACAATTAGTT
TGGTTGATTGACAACCTGGATCAAGTCTATTACTCGCCTGCTGTTTCTAC
TCACGTGTACACGTGGAAGAGACTGGATACTAAAGACAGTAAAGCGATGC
ATATCGCAACCAATCAGAATGGATCCATTGTGTGGTGTATTGACCGAAAC
AATGTGGCCCATTATCGTGTTGGCATCAAAGAGTCGACACCCCAAGGTGT
ACAATGGGAGCCTTTCGAGAAGAACGTCCATTACATAGCAGTGGACAAAG
ATAGCGTGTGGATGATCAAAAAGAATGGAGATGTCTTTGTACGCACTGGT
GTTTCCAACCAACGTCCATCGGGCACCACTTGGATAACCATCAAAGCTAA
CAGTGATCTTGTACAAATCTCTTGTACTGATGGTATTGTTTGGGCACTCG
ATATCTATAACCACGTTCAAATCTTCCAAGGTGACTTGCGAACATTGAGT
GTGTCCAACCCTGCCGATCATGATTTATCATGGGTCGAACTACCCGGAAT
CGCCGCTAGCCATGTCACCTTAGGATCGAAAGCTGTTTGCTGGATCATTG
ATAAAGACAATCAAGTCTGGTTCAACCAAGACGTCTCGCGTGAAAACCCG
GCTGGCGGAAATTGGTACCAACTCTCTTTGGGGGAGAACAGATCAGAGAG
CGCGGATTGGTTCTCTTCAGTTTTGTCCTATTTCACTAAGGGCAACGAGC
CAAAACAAATCATGGCCAATGACATGGCTGGTGTTTTGATTCTCGGCAAA
CAAGGTTCAATACATGTTGCTCATGGTCATTTATTGGGTACCACATGGCA
ATCTGCAGTTCCGACACAAATCAAATCAAGCGGCTGTTGGACCTGTATTT
CAGCTGGTGGAGCTGATATGAATAAAGGTTACGTATGGACCTTACAACCG
AACGGACAACTCGTATGTTTCAAGTCCGGTCGACAAACTTATAATGTTCA
TCCGCCGAACCGTGTTGTGTTGAAGTACTGTTCCGCTGGTCCGCGTTCGC
TGTGGGCTTTGACTTCCGGACAAGATGTTTATGTCCGGTTAGGTATTTCG
GATACTTGTCCGCAAGGTTTAAAGTGGTTGAAAGTTGACATGTTAGCACA
AGGGAACCGTCGTCTTATGAACATATCAGCTGGAAATCATGTCGTATGGG
CGGTCGATTTCGAAGGAAACGCTTGGTTCCAGATGGGACGTGAGGATCGG
CGAGGGGCGGGTTACGCCCCTGCTTGGGTTCCAGTCGAAGGATGTCCGCT
TGACGGAAGCAAATTTACAAAGATTGTTGTAGGGCCGGATGATTTAATTG
TATGGGCGTGTGACAACAAGAATAACGTCTATGCTAGGAAAGATATTACG
GAAAACTTTTGGGTCGGTACTTCTTGGGAGGTTGTGTCTGGTACCAGTGG
TAAGGACATAGCGATCAGCAATAACCACGTGTGGAGCTTATGTCCTAACG
GGGACGTCTTATGCAGGTTTGGCGTGTCACCCAACAACGTTTGTGGTGAC
TACTGGAAAAAAGTTCCCggaaatttcgagaaaatcagcgTCAGTGCTAA
TGATGAATTATGGGGTATCGATCGCTTTGGACATTTATACCAACGCGAGA
CTTTATTGTTTTATGGGAACTCTCTTTCATGTCGGGCACCATCTTATGAT
GATCTGTTCTCTGATCATAACGATTGGGAATTCATCTAAATCGAGCCACG
GCAGACGCGTGTTAAAAACGTTCGTCCACAACGTCAAATATCGAGTAGTT
CAGATGACGAAGGAACTTATGTAAACCACAGGACTAGTTTAAATCTCTCA
CTCGACGACGAAGATCCTTATACCAATCGACCAAGTCCTTTAACCGCCGC
TCCTTCAACGAAACCTAAACTCGTCGCTGATTCTAGTTTTGATATGAACG
TCGTTAACGTTAAAATCTCACACAAACGTCAAGGTTCGAATGTTAGTATT
GCTTCACTCACAGAACGATGCCGTGAAATCAAGGGCGAAGCAATAGAACA
TAACACTACGCCCAAAAAAGCACCAATCTCCGCCAACGATGATAGCTTAG
AAGCACATCTTCAACCGCATCACGAACCGCTGACGGTTGAGCATCATCAC
AGCGCGGACGAGTCGGACGAAGACGGAAAGTTGTACCCGGTTAGCCCGTT
TCCACCACCGCAAACCACCACACGATCTATATATTCACAGCGTAGTGTCA
GTTTATCAGAACTCTCTTTCGAACGTACACAGGACCTTGGTGACGAGGAT
GAAAAATTACTCGAAGACATGATGGAATACGATCGAATCGATGTTCAAAA
CGATTTAATCGAATCGATCGATTCGATAACGGATATCGAGGATAACGATT
CACCACCACCTGTTGATATCAACGACCCAGATTCTAAAGcCATCCCTACT
ccaaaacgaaaacgaaagaaGAAAACACGCAACAGTTATCCAAGTTCACC
CAGCAGTTCCGATTTGGAAGGACGACCGGTCAACACCAAAGATTCTGCCG
CTCCGGAAGCCATTCGCGACCGGTTACGGTACTTAGCGGACAGTTGGGCT
GGTGTTGTTTTACCTGAAAAATGTGGTCAAATCCAATCACTAGCCTGCTC
GTCACAATTAGTTTGGTTGATTGACAACCTGGATCAAGTCTATTACTCGC
CTGCTGTTTCTACTCACGTGTACACGTGGAAGAGACTGGATACTAAAGAC
AGTAAAGCGATGCATATCGCAACCAATCAGAATGGATCCATTGTGTGGTG
TATTGACCGAAACAATGTGGCCCATTATCGTGTTGGCATCAAAGAGTCGA
CACCCCAAGGTGTACAATGGGAGCCTTTCGAGAAGAACGTCCATTACATA
GCAGTGGACAAAGATAGCGTGTGGATGATCAAAAAGAATGGAGATGTCTT
TGTACGCACTGGTGTTTCCAACCAACGTCCATCGGGCACCACTTGGATAA
CCATCAAAGCTAACAGTGATCTTGTACAAATCTCTTGTACTGATGGTATT
GTTTGGGCACTCGATATCTATAACCACGTTCAAATCTTCCAAGGTGACTT
GCGAACATTGAGTGTGTCCAACCCTGCCGATCATGATTTATCATGGGTCG
AACTACCCGGAATCGCCGCTAGCCATGTCACCTTAGGATCGAAAGCTGTT
TGCTGGATCATTGATAAAGACAATCAAGTCTGGTTCAACCAAGACGTCTC
GCGTGAAAACCCGGCTGGCGGAAATTGGTACCAACTCTCTTTGGGGGAGA
ACAGATCAGAGAGCGCGGATTGGTTCTCTTCAGTTTTGTCCTATTTCACT
AAGGGCAACGAGCCAAAACAAATCATGGCCAATGACATGGCTGGTGTTTT
GATTCTCGGCAAACAAGGTTCAATACATGTTGCTCATGGTCATTTATTGG
GTACCACATGGCAATCTGCAGTTCCGACACAAATCAAATCAAGCGGCTGT
TGGACCTGTATTTCAGCTGGTGGAGCTGATATGAATAAAGGTTACGTATG
GACCTTACAACCGAACGGACAACTCGTATGTTTCAAGTCCGGTCGACAAA
CTTATAATGTTCATCCGCCGAACCGTGTTGTGTTGAAGTACTGTTCCGCT
GGTCCGCGTTCGCTGTGGGCTTTGACTTCCGGACAAGATGTTTATGTCCG
GTTAGGTATTTCGGATACTTGTCCGCAAGGTTTAAAGTGGTTGAAAGTTG
ACATGTTAGCACAAGGGAACCGTCGTCTTATGAACATATCAGCTGGAAAT
CATGTCGTATGGGCGGTCGATTTCGAAGGAAACGCTTGGTTCCAGATGGG
ACGTGAGGATCGGCGAGGGGCGGGTTACGCCCCTGCTTGGGTTCCAGTCG
AAGGATGTCCGCTTGACGGAAGCAAATTTACAAAGATTGTTGTAGGGCCG
GATGATTTAATTGTATGGGCGTGTGACAACAAGAATAACGTCTATGCTAG
GAAAGATATTACGGAAAACTTTTGGGTCGGTACTTCTTGGGAGGTTGTGT
CTGGTACCAGTGGTAAGGACATAGCGATCAGCAATAACCACGTGTGGAGC
TTATGTCCTAACGGGGACGTCTTATGCAGGTTTGGCGTGTCACCCAACAA
CGTTTGTGGTGACTACTGGAAAAAAGTTCCCggaaatttcgagaaaatca
gcgTCAGTGCTAATGATGAATTATGGGGTATCGATCGCTTTGGACATTTA
TACCAACGCGAGACTTTATTGTTTTATGGGAACTCTCTTTCATGTCGGGC
ACCATCTTATGATGATCTGTTCTCTGATCATAACGATTGGGAATTCATCT
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029143-exon-sc0000726-1491911889:165320..166021 | TCONS_00029143-exon-sc0000726-1491911889:165320..166021 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1510915933:165320..166021 | TCONS_00029143-exon-sc0000726-1510915933:165320..166021 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1575043694:165320..166021 | TCONS_00029143-exon-sc0000726-1575043694:165320..166021 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1491911889:166338..166757 | TCONS_00029143-exon-sc0000726-1491911889:166338..166757 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1510915933:166338..166757 | TCONS_00029143-exon-sc0000726-1510915933:166338..166757 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1575043694:166338..166757 | TCONS_00029143-exon-sc0000726-1575043694:166338..166757 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1491911889:167006..167239 | TCONS_00029143-exon-sc0000726-1491911889:167006..167239 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1510915933:167006..167239 | TCONS_00029143-exon-sc0000726-1510915933:167006..167239 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1575043694:167006..167239 | TCONS_00029143-exon-sc0000726-1575043694:167006..167239 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1491911889:167484..169501 | TCONS_00029143-exon-sc0000726-1491911889:167484..169501 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1510915933:167484..169501 | TCONS_00029143-exon-sc0000726-1510915933:167484..169501 | Clytia hemisphaerica | exon |
| TCONS_00029143-exon-sc0000726-1575043694:167484..169501 | TCONS_00029143-exon-sc0000726-1575043694:167484..169501 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000726 | supercontig | sc0000726:165320..169501 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00029143 vs. Swiss-Prot (Human)
Match: TCPR2 (Tectonin beta-propeller repeat-containing protein 2 OS=Homo sapiens GN=TECPR2 PE=1 SV=4) HSP 1 Score: 246.128 bits (627), Expect = 1.816e-66 Identity = 175/633 (27.65%), Postives = 298/633 (47.08%), Query Frame = 3
Query: 846 LADSWAGVVLPEKCGQIQSLACSSQLVWLIDNLDQVYYSPAVSTHVYTWKRLDTKDSKAMHIATNQNGSIVWCIDRNNVAHYRVGIKESTPQGVQWEPFEKNVHYIAVDKDSVWMIKKNGDVFVRTGVSNQRPSGTTWITIKANSDLVQISCTDGIVWALDIYNHVQIFQGDLRTLSVSNPADHDLSW-----VELPGIAASHVTLGSKAVCWIIDKDNQVWFNQDVSRENPAGGN--WYQLSLGENRS-ESADWFSSVL----SYFTKGNEPKQIMANDM--------------------AGVLILGKQGSIHVAHGHLLGTTWQSAVPTQIKSSGCWTCISAGGADMNKG-YVWTLQPNGQLVCFKSGRQTYN----VHPPNRVVLKYCSAGPRSLWALTSGQDVYVRLGISDTCPQGLKWLKVDMLAQGNRRLMNISAGNHVVWAVDFEGNAWFQMGREDRRGAGYAPAWVPVEGCPLD--GSKFTKIVVGPDDLIVWACDNKNNVYARKDITENFWVGTSWEVVSGTSGKDIAISNNHVWSLCPNGDVLCRFGVSPNNVCGDYWKKVPGNFEKISVSANDELWGIDRFGHLYQRETLLF---YGNSLSCRA--PSYDDLFSDHNDWEFI 2612
A+SW G P I SL S + +W +D ++ S A+ W++ + +A + +G+++W I++ + + G K + W ++A+ D+ W+I+ +GD++++TG+S RP + + L QI+ + +VWAL + +G VS+ W E + +TLG + W +D +WF + + P G + W+Q+S+ + + F +++ S T P + +A+ + +GV I + HVA G L+GT W VP S+ W + A A +G ++W Q + L C S + + V P ++ +A +LWAL S V++R +S +CP G+ W ++D+ G +L +++ GN +WA D G +F++G + + PAW+ +E P+ G + P+D ++W D++ NV+ R ITE VGT+WE V G +A+S VW+ CPNGD+ R+GV+ N GDYWKK+PG+ +V+A+DELW + G+L QR T F +G S +A P +DL ++WE I
Sbjct: 799 FAESWMGYSGPGY--GILSLVVSEKYIWCLDYKGGLFCS-ALPGAGLRWQKFE---DAVQQVAVSPSGALLWKIEQKSNRAFACG-KVTIKGKRHWYEALPQAVFVALSDDTAWIIRTSGDLYLQTGLSVDRPCARA-VKVDCPYPLSQITARNNVVWALTEQRALLYREG------VSSFCPEGEQWKCDIVSERQALEPVCITLGDQQTLWALDIHGNLWFRTGIISKKPQGDDDHWWQVSITDYVVFDQCSLFQTIIHATHSVATAAQAPVEKVADKLRMAFWSQQLQCQPSLLGVNNSGVWISSGKNEFHVAKGSLIGTYWNHVVPRGTASATKWAFVLASAAPTKEGSFLWLCQSSKDL-CSVSAQSAQSRPSTVQLPPEAEMRAYAACQDALWALDSLGQVFIRT-LSKSCPTGMHWTRLDLSQLGAVKLTSLACGNQHIWACDSRGGVYFRVGTQPLNPSLMLPAWIMIEP-PVQPAGVSLVSVHSSPNDQMLWVLDSRWNVHVRTGITEEMPVGTAWEHVPGLQACQLALSTRTVWARCPNGDLARRYGVTDKNPAGDYWKKIPGSVSCFTVTASDELWAVGPPGYLLQRLTKTFSHSHGTQKSSQAAMPHPEDL---EDEWEVI 1411
The following BLAST results are available for this feature:
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