XLOC_017540 (gene) - C. hemisphaerica

Overview
NameXLOC_017540
Unique NameXLOC_017540
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000831:91850..96774-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017540 ID=XLOC_017540|Name=XLOC_017540|organism=Clytia hemisphaerica|type=gene|length=4925bp|location=Sequence derived from alignment at sc0000831:91850..96774- (Clytia hemisphaerica)
AGAACGTGAAGATGAAAGTATCGTGACAACATTAGATTCAGACTGTGATT GTGTTATTATCGAAAATGCAGGACAAGGTACTGTCAAACTTTTGCTAATC TTCATTTAGCTTTTCAAAGTACCTTGTTTGTCAAATAGACAATTAAAAGA ATAGTTTTATTATTCTAATTTTAGAGGGAAATAATTGTGATTTTTCATGA AAAAGTTGATTTTGGACATTTTTTTGGGTGCTGATCTTTGATTAGTTTTT GATGATTTTTGGGATCTGGTGCTGGTATGGACCTGGTTGGCCAGAAAACT AANGTGTGCTGATTTTTGATTAGTTTTTGATGATTTTTGGGATCTGGTGC TGGTATGGACCTGGTTGGCCAGAAAACTAAAAATCGATAAAATTGAGGTG TATCGTTTTTCTGGCCTTTTTGTCTAGATTTTGATAATTGAAATATGGGG TAGAATCATTTAAAGGGCACCCTATTGCATAGCCTATTCACCGATTTGAT TACTGGATTACTTCAAATATATGAACAAAGTTGTTGTAATTTGACTTATA ATTAGATGATTATTAAAATACTTATAAAAGCAGTTTTTAAAAACAGTAAA ATTGGTAATTTTATAGAATTTTCGACAAATTTTCGAAAAACTGTCAAAAA TACCTAATTTAATCTTTTTCAATGCTTCTAGTTCTACCCAATTTTATTTC AATTGTCAAATCGAGGCAAAAACTTCAGAAAATAGGGAATCTGAAAAATA TTATCAATTTCGACAAACGTCGGTCATCCCTCCCCCTCTACTAATTTACT CTCTTTCTCAGAACGTGGAGATGAAAGTATCGTGACAACACAAGATTCAG ACAGTGATTGTGTTATTATCGAAAATACAGGACAAGGTACTGTCAGACTT TTATTAATCTTCATTTAGCTTTTCAAAATGTTTTCTTTGTCAAATGGACA ATTAATAGAATAGTTTTATTGTTCTAATTTACTCTCTCTTTTTCAGAACG TGAAGATGAAAGTATCGTGACAACACAAGAAACAGACAGTGATTGTGTTA TTATCGAAAATGCAGGACAAGGTACTGAACAGTTTTTTTATCTACCTCGG AGGTCCTAAAAATTAACCGATGTCCGTTTTTTCGTCTGTTCGTCCGTTCG TCTGTTACAAGCTTTTCTCGGGATTGGCTAATTATTTTTTTTTTTTTTTA CACAATGATGCAAAATGCCAAAATACCCAAGTTGTGACTGAGCCAAATTT TCGAAAAATATTTTTTTGGGCAAATTTGGGCTAAATTGGTTTATTTTTTT TCTGTTTTTTTTGGCAGAAATATAGAGGGCAAGGTTCTCTAAAAGATAGC TGAAGTATTTTTCCCAGAAAATTGTTGTTTACCATAAAATACGAATTTTC GTATTTGGGGAAATTTCCTTTTACCATTTCACAATTTTCATTAGACTAGC TTGTTTATTTTTCCAGTCTGAATTTTTGTACAATTATTGCCATTTTTTCC TTTTTCATCTTACGTTAATCATTAGGTAGGTTCATTCAGCATGTTGCTTG TTTAAATTTGTTTCGAAAAGTCTTTCAAAGCTTTCTCAAGTACTACCAGT ATTGAAAATGAAATTAGGTCTCGTGGATAGGGCAACAAGTCGAAAGATCA TAGTTTAAGTATTTTTTCCTCTAACTACACCTCAAGTTAAAGTTTTGTGT TACTTACTTTTTAATATTTTCATGTGAAAATTTCCGTTGTATTCTATAAA AGATTACTATTATTTAAGTGATCTTTTTTTCTTCAGGTAATGGCAAATAT GTAGATCGACTTAATCAGATTAAATTTGACTCTAAGAAAGACATTCAGAT ACCTGGTAAGATTGTACTGTCGAACATGATAATATATTTTTGTGCACCCA ACCCCAAGAAAGCCCCCATTTTTGCAAAGCGAATAAAGTACTTATGAGTA AAGCGGTTTTTCTCTTGTGTGTATCTATATTATAATACATACGCTTATCT CAGAAATCAATTCATCAAAATTCTCGCATCAAGCTTATTCGGTAATAATT TTTTAAGACAATTCTATATTCGCTATGTGCATTTCCTTTGTCAGTGCAAA TATTCCTCCTAAGGATGAATTACAATTAAACAAAACTAAATTTCGCAAGA ATTGGTTTTGGTAAGAGCAATAACTTTTTGGTAATTGGCGAAATTTGCTG AAATTTACGTCCGCGAAAATTTCTTCCCTTGGGGTAATCTATAAGGATCT GTAATTAGTTTTTGTTAACAATAAAAAAAAACTTAGCAATGCGAGCGTTC AGAAGTTATTGTCCCTTTGAATGAGAGTATATTAGGCTTTGCTCTCTTTA ACGTAACAAACGTAGACATGATCGACTATCATTTCCAGACATTCTATCTA AGGTGGATATTTTAAATTTTCTAATTTTAGGAATAACTTCAGAGGCTATA TGTTATCTCGATGGTGACAAACGATTCCCTTTCTGGAAAATCGCTTCAAA ATCATTAGAAACCCTGCCAGTGGCTGAAAGCATTCACTATGGAAGATACG ATCGTAACAAGCTGTGTCCAATCCGAACTTTGTAAATGCCAATTGCAGCT TTCTCGTCAACACTGATAACATGCTTAATGCAAAAGACATCTTTTGTGAT CTCCATGGGCATTGGGAACGTGCTGGAACCAAAAGAATGAATTGTGTACC GGATAAAGGACGCCTAGTGAAAATTCCCGAAGGAGAAATCAAAATAGATG ATAANGGACATAATAAAAGTATTTTATTCAAGGACATATTTGGTAAAACC ATCAATGATGACAAGGAGCCTGGGTTAGTAGATGTGCTTGAAATCGAGGA ATTTGAAAACGTTGTCAGAGGCTTGTCGACTAAGTGGGAACAGATGGGGA CTGGGGAAAAGAAATTTAGGGACTATTTTTTGCAATATAAAGCAGACGAC ATACGCAATTGCATGACTGCCGAACTACGAGCAATGACAGGACTGGGGTT TCCCCCAAAACCCTACACCCAAAACCCGAACGAGTCGAGTAACGCCAAAC TAAAATCTGGCCTTGTCGACTCATGCAAAATGTCATTAAAAGAAGTAGTT CAACTATTGCGTACTGCTTCGGAGTACCAAGAAGAACAAGTCGAATTAGC TCTTTTGGGAAGGAACTCTTGGCGGCTTCTACCAGAGTACAGACAACAAT TTCCTAGCATTAACCGTATTTATCAAATGAACAAGTCACAACGCGCAAGA AACGTTTCAATTCTTTATCTGTTGCTAACAACTCGTCCACAACGGAATTT CAGATAAAAGCCGAGGAAACTGGACTTCTTTATCCTCCAATGACAATTCT TAAGGACATATTCAATGATGGGTCTGTATTGCTCAATCCGGACAGTATTA CCGATGCCCCTGGAGCACCCACAGTAAAAATTGTCAAGAATTTACACGAC CCGTTACAACCATATAGAGTATCAATCAAAAATGATGGAATCGTATCTTG TCAACAGACATGTGACAGGTACAAAGCTTATGCTATTTGTGAGCACACCC TTAGTGTTTCTCAAAGAGAAGGGATTCAAGATAAATCTATTAACAAATTA AAAAGAAAGCAATCATCCAGATCCACAGGGCGAAACCTTTCTGATCTGTG TAACGTCAACAAGGACCCAAAAACTGGAAAGAAAGCTACCAAATCAACGT CAAAGAGAAAAGGGAAAAGAAAATCCAACAGTGTATTTTCTTACACCAAC ACCCTTAATGATACCTCCAGTGTTGCCAGGCAAAACCCCGATATCATTGG TCAAGTTACCCAGTCATCAATCAACCCCATCCAGAATCAAAGCATCGCNA GGTCAAGTTACCCATTCATCAATCAACCCCATCCAGAATCAAAGCATCGC CTCGACATCCCAGACTGATCAGGAAATATCTTCAGAAATGCGAATCCCAG AAACTATTTATCAAGATACCCATACCAATCGAGAAATGTCTTCAGTATTG AAAGAGCCTGAAAACATTGTTCGAGATACCCATTTATCAACCCTGCCCAT CCAGGCTCAAAACATTGCCTCAATATCCCAGACTATTCCGGAAATACCTT CAGTAACGCAAAACCCTGAAACTGTTTATCAAGATACCCATTTATCAACC CTGCCCATCCAGGCTCAAAACATTGCCTCAATATCCCAGACTATTCCGGA AATACCTTCAGTAACGCAAAACCCTGAAACTGTTTATCAAGATACCCATT TATCAATCCAGCCCATCAAAGCCCAAAGCATTGTTTCGACATCCGAGACT AATCAGGGATCGTTTTCATTTTCGCGAAACCCGGGAACCAACGATGCCCA TAAAGTCATAAGGAAAAGAGCTGGTACCCGTATTACTCAACCTTCTAAAG TGGTCAAAGAAATGCCAACAAAGATTATTCTAAAAGCATCCAAACATGCA GTTCCACCTAGTGAGCGAAAAGAGCAACCACTTTTACCTTTGGGAAGACC ACTCCCACCAATACCACCAATGCCAGAGCCTCAAATCCGTCCCTATGAAA TAAAAAAGCGAGCAGGAAATGTTGCAACGTGTCATGGATGTCGTAACGGC TTTAAGAAATCAGATAGCAGCTTGTTTGTGTTGTTCAGGGAGGAGGAGGA TTGGTTTCCAAAAGTAGATAAAGAAAATTATACGAAACAGTGGAGCACAA GCAAAAAAAACGCCGACGCCCGTTTATCACAAAAGAACATTTGACTGTAC TTTACAAAGGTGATGAACGTCACAGCTAGTCTTGAATATGTGACTTTTGA GACTTTTGCAAAGATTTTGAATTTTGTTTTTAGGCTTTATAGTCTGTATT GTCCAGACTAGATCATAGACAAAAATCCTGGTCTGACAATCCATTGTTTT AGCTTTTTGTTAACTTTTGTTTTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00030595TCONS_00030595Clytia hemisphaericatranscript
TCONS_00030594TCONS_00030594Clytia hemisphaericatranscript
TCONS_00030593TCONS_00030593Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00030595-proteinTCONS_00030595-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000831supercontigsc0000831:91850..96774 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.48 1.57 1.1 0.37 3.5 2.69 3.69 4.61 3.22 3.33 5.21 3.46 2.97 3.4 3.15 4.43 4.27 4.4 2.68 2.87 4.47 4.38 2.17 2.89 1.89 2.08 1.25 0.56 1.44 0.9