XLOC_017650 (gene) - C. hemisphaerica

Overview
NameXLOC_017650
Unique NameXLOC_017650
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000845:81372..86583+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017650 ID=XLOC_017650|Name=XLOC_017650|organism=Clytia hemisphaerica|type=gene|length=5212bp|location=Sequence derived from alignment at sc0000845:81372..86583+ (Clytia hemisphaerica)
aaggaaaaagCATGCAAAGATATCAGAGGTAATAATGTGTGTCAGAGGAA AAAAACACCTCCCATGCATGGCACAGTgaaatattgtaatttttaattta gTACATGAcatgaaattattatttataCTCCAAACTTTTATCTTGAAGCT TTAAACTATTTGAAcgctcaaaatatgtcaaataaacaaATTGCCAAAAG AAGTAAATGGGCTGTTGATTTCAACTCACCACCTAAAGGGGCTCCATTAA AGCTAAAAAGTAAAGACACTTTAGAATCAGTTGGATTTTCTGAAAGCCGC GCAAATGTGGCACAAACTGGAAAAGAAACAGCTGATGCAAAACTGATATC AAAGAGATCCTGGAACATTGCCCTTGGCCCTATCAAACAGGTGCCAATGA ATTTGTTTATAATGTATATGAGCGGTAGCTCTATATCAATTTTCCCTATT ATGGTTATCGGTATGATGgtgtttcgaccaatcaaagCTGTTATGGCCTT CAAGGATACATTCAAAGTCTTGGATCAAGATTCTAATTCAGCAATTCTGC AAAAGATTGTCTGGTTGTTCGGTAATGTGCTGGGAATTTGTGTAGCACTT TGGAAATGTCACTCAATGGGAATATTACCAACTTCTCCCTCTGATTGGCT TGCATTCAAAGAACACAGAGAACGGGTTGAGTTTGTCATTGGTGGACTCT CTCAATAAGCTAACTTGTCAGAATCTTTCAACCACTTTTTAAGTCAACAC AAGTTTTCAAGAACAacaagagataatattatataattATGAAACCCACT TTTATATAATATTATTAGACTTTTGCGATGACTGGATAGAAATTAAAATA TAAACATGTTTCATCAACATGATAAGTTTTTGCACAATTATTTTCAAGCA TACTTTTCATGATAATTACTTCTATTTTTTGTTTCCTCGCTAAACTTATA CTATACATATGATTTTGTgagattttataaaaaagctcGCTTTCAAGTGT CTAGattttaagtttattttaatttataattATTATGATGAAgtatttaa atttgaaatttgctttcaaaacttttgaaagtttttgagttTCTGAGTAT CATAAGTTTTTTTGCCCAAGTGGAAATAGAATTTATAGTGAATCTCCTTG AGAAATCTCTCGAAGCCATTTCAAACATTATCTTTGCTTAATGATGTCAT TAGCTGATTTCCAATGTTGTATAATCATGATAAGCCAAACAACATGTTTT CTTTTATTCCTTTAGCAGGTCATGATTATATCAAATGATCTGTCAAAGAC ATTTATTATTCACGTGTGCACAGACATGTGATTTTCAATGTTTATAATGT ggtttacacttttttttttcaaaacctttttaaactaGGCTGCAACATGA ACACTTATAAcataaacaattttaaattagTTATTTTGAAATAGTGACAT AGTAGGAAAAAAAGTACAATAAATTAAATCTTTCACTGTATGTGTATAAA GGACTAcaaatttatgttttgatttattgcAACTTTTGCTTCTTTCTTTA ATATTGAATATATTGAATTTCGCAGTTTTCTGCTAAGCTTTAAAAATAGT TCTCTAAATACTACCTGGCTTTTACACGAGGGCATGTCAAAGCTTGTGTG ATACGTTATAGTATaccttttatttcatttatttttaagCAACTCAATAA AATACTAAAAGTACAACCATGTCTATGTTTGCTGATGTTGATTTGTGTCC TCCAGATCTGATCTTTGGTATCCGAGATGAGTTGATTGCAGATACTGACC CACGTAAGGTGTCATTACTTATTGGTGCATATCGAACAGAGGAAGGCAAA CCCCTGGTGCTTCCTGTTGTTCGCACTGTTGAGAAACAAATTTCAAATGA CGAAACCTTGAATCATGAATATCTTCCCATAGAAGGAATGCCATCTTTTT GCTCAGCAGCCAGCAAATTGGCTTTAGGTGAGTAAACCAGACAGGTGatc aaaaaaggttaaaaatccaCAAAGGGTATACATAGGAGCAAGTTTTGAGA TCAATGATACAAGGGGAGCTTTTTTCCAAATCGAGAACGATTCCTTTTGT GTGAAATATTATTGTCCTAGGTGTGAGTAAAAACATGTGAGGTAAATAAG GCAGCTGATCAAAAGAGGTttaaaaaaatcctcaaaattgtGCAGAATTA ATTTGAGAACAATGATGTCAAGGgagatttttctttaaatcaaaaagaaa atccttTTCTAAAATAAGTTAAAGTCTCTTTAATTTGTGTTGAATTTTGT GTGCATAATAAAGTTATTTTTATGAATTATATCTTATTTACAGGTCCTGA CAGTAAAGCTTTAGTTGAGAATCGAGTTGCTTATGTTCAAACTTTATCTG GTACTGGTGCTGTCCGTTTGGCTTTGCAATTCTTGAATAAATtccatgca ggaaaatctgtttATGTACCAAAACCGACTTGGGGTAACCATAAAAAGAT TGCCATTCATGCTGGATTTAATGATATTAAAGAATATGCTTATTTCGATC CTAATACCAAAAGCCTTGATATCAATGGAGCTATTCGTGATTTAGAAGCT GCTGTGGAAGGCtctattgttatttttcatgGATGTGCTCAAAACCCATG TGGCGTAGACCCATCAGAAGATGATTGGAAAGCTTTCGGTCAAGTTGTTG TAAGGAGGAAATTGATCTGTGTTATGGATTTTGCTTACCAAGGTTTTGTA TCTGGTGACCCTGATGTTGATGCTTTTAGTTTACGTCACTTTGAAAGTCT TGGAGTTGAGTTATTTTTCTGTCAATCTTTTGCCAAAATCTTTGGTTTGT ATAACGAGAGAATTGGTAATCTAGGCGTTGTCTGCAACGATAGTACTCTG GCTATGAATGTAAAAAGCCATCTTAAAGCATTTATTAGACCAATGTATTC CAACCCGCCTGCTCATGGCGCACGTATTGTTGCTACAATCTTGAACAATA AAGCACTGGACTCAGAATGGTAAGTATGagatattaaattttctttaaat aattaaaaaatcaacTAATCATgatatataataataattatattaTAATC AACCAGGCTTTTTGAGGAAATTCATAACTTCTTTCTATATTTCCTCCTTG ATTTCACCTTACTACATTTTCGAATACTTGTTGAGTTTAATAAGTTATAA TTGTTGTAAGAACGAAGTGTAAAAATGaagtttgaattattttttaggaG AGAGCAGTTAAAATCGATGGCTGATCGGATCTTGAGAGCTCGCCAACTTT TGAATTCCAAATTAAAGGAAGCTGAAGTTCCTGGAGATTGGTCTCATATC CTTTCTCAGAAAGGAATGTTTACTTTCACTGGTTTGACTGCAAAACAAGT TGCAGTTCTCAAAGAAAAGCATCACATGTATATGCTGCCAAATGGACGTA TCAACATGTGTGCAGTGACCGAAGGTAATGTTGATTATGTTGTTCAAGCT TTTAAAGATGTTGTCGTTAATGTTGTTTGAATAtaggtgatttttttaat taatcgAGTGAGGTGTTGGCAATGGTTTGATATTGTGTGAATTTTGAatt gcaaagaaaatttttaaccaaattttAATGAGTTTACGTTAACAACCTTT AATCCTTGAAAAGAAATTAGTATGATNGTTAACCAAAAAATTAATGAGTT TTACGTTAAGAATCTTTAATCCTTGGAAAGAAATTAGTATGATTGATAAT AGACTGAAAAAGGTTTAAAATCCCTTATCAACCTGATTTTGTCACTGGGA AAAATTAgtatttttagatatttcacaTCTATTGTCTGACTtagattttt agtttttttttaacaatttttttagcGAGAAAGTTTTCCAGTGATGCaat ctattttcatttttgagaaattctgaATAAGTCTAATTCTGCTTAAGGAA ATCCTTTTTTAGGCTTCTTTACTTTCTTCTTTGCTTCAGTTTAATGTTAT GTTatgattttcaatatttaaaatttttttcaggtttACATAATGTTATC AGTTCATAGTCATTGAAatgtttgtttatttatttttattttttttccgt aaATAATTGTGCATTTTTGTGGTGTGGCGTGgtgaaggtttttttttttt ttttttttaaaaaattttccatttttgtgGTGTGGCGTgggaaaggtttt tttttttttttttgtaatgagttaaaaacatttttataatgTGCACCATT GAAATAATCTTCTAAACATTGCATATATTATAGAACCATTAGCCGATTGC CTGAAAGTGATGTAGAATCAGTCAATACGACACTTGAAACCAAATAGCTG TTGCGCCCgagatgtaatgtcagaagacattgcaaaggacatgggccccg tcaacggggggggggggggggcaggggGTCCATGgcccccccactttttg gtggaccatgtcatacgtttttaagagttactattttaagctggtttgag accaaagcaaaccacaaaaactattattctccccaaatagatatcgtttt aaggtgttttgagggtgtaaaaagttttcttcgtcgcccaaccatggtgg gcgacagtttttttccaaaatgttgtCCCCCTCACTCAAAAAGCTCGTCG GGGCCCATGAAGGTGCATAttatgaaaacaataaaattactTCAACTGGA CATTTTAAAATGGCACAGCTTATTTGATTGTTATTTAGCAAAGTCTTATA TAATATCACCTTGATGAGAAgacaaaaaatgtttattttatttttcttga caattttctcatgattttatttgatttatagTTCCAGTGTAATTTGATAC TAGTATTTTTATGacagcaaaattaaaaaagaaatttcattagttttttt caattatttatgtctctttaaaaaaatagcCTTCTGTTCCAAAATCTGAT TTCGTTCCCTTGTGAATTAACTTGATTCAAcattttgttcactttttttc CAGCTATTACAAAGTTTTAGTAAAAGTGTTAATGGCATAGTGTCAAAGGG AGTCCCTCCTTCTTAGATAAATTGATTTAGTTGCAATATTAAATTTTGAA GACCTTGGGTTGAAAGCTCAAAAGACAAGGGATGTCTCACTAAGGGTACT AAAATACCAGTAAGGTCTAaattagtaatttttttaatcattttcagAAT CTTTTATAatct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00030748TCONS_00030748Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00030748-proteinTCONS_00030748-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000845supercontigsc0000845:81372..86583 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GOT1aspartate aminotransferase, cytoplasmic Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.89 37.36 50.83 52.11 25.74 20.62 28.59 29.52 54.18 42.34 52.54 80.46 38.46 32.41 34.4 35.31 36.29 38.09 16.35 18.22 29.99 28.49 27.4 27.66 39.16 38.06 30.44 25.79 20.08 17.82