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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030748 ID=TCONS_00030748|Name=TCONS_00030748|organism=Clytia hemisphaerica|type=transcript|length=4618bp
aaggaaaaagCATGCAAAGATATCAGAGGTAATAATGTGTGTCAGAGGAA
AAAAACACCTCCCATGCATGGCACAGTgaaatattgtaatttttaattta
gTACATGAcatgaaattattatttataCTCCAAACTTTTATCTTGAAGCT
TTAAACTATTTGAAcgctcaaaatatgtcaaataaacaaATTGCCAAAAG
AAGTAAATGGGCTGTTGATTTCAACTCACCACCTAAAGGGGCTCCATTAA
AGCTAAAAAGTAAAGACACTTTAGAATCAGTTGGATTTTCTGAAAGCCGC
GCAAATGTGGCACAAACTGGAAAAGAAACAGCTGATGCAAAACTGATATC
AAAGAGATCCTGGAACATTGCCCTTGGCCCTATCAAACAGGTGCCAATGA
ATTTGTTTATAATGTATATGAGCGGTAGCTCTATATCAATTTTCCCTATT
ATGGTTATCGGTATGATGgtgtttcgaccaatcaaagCTGTTATGGCCTT
CAAGGATACATTCAAAGTCTTGGATCAAGATTCTAATTCAGCAATTCTGC
AAAAGATTGTCTGGTTGTTCGGTAATGTGCTGGGAATTTGTGTAGCACTT
TGGAAATGTCACTCAATGGGAATATTACCAACTTCTCCCTCTGATTGGCT
TGCATTCAAAGAACACAGAGAACGGGTTGAGTTTGTCATTGGTGGACTCT
CTCAATAAGCTAACTTGTCAGAATCTTTCAACCACTTTTTAAGTCAACAC
AAGTTTTCAAGAACAacaagagataatattatataattATGAAACCCACT
TTTATATAATATTATTAGACTTTTGCGATGACTGGATAGAAATTAAAATA
TAAACATGTTTCATCAACATGATAAGTTTTTGCACAATTATTTTCAAGCA
TACTTTTCATGATAATTACTTCTATTTTTTGTTTCCTCGCTAAACTTATA
CTATACATATGATTTTGTgagattttataaaaaagctcGCTTTCAAGTGT
CTAGattttaagtttattttaatttataattATTATGATGAAgtatttaa
atttgaaatttgctttcaaaacttttgaaagtttttgagttTCTGAGTAT
CATAAGTTTTTTTGCCCAAGTGGAAATAGAATTTATAGTGAATCTCCTTG
AGAAATCTCTCGAAGCCATTTCAAACATTATCTTTGCTTAATGATGTCAT
TAGCTGATTTCCAATGTTGTATAATCATGATAAGCCAAACAACATGTTTT
CTTTTATTCCTTTAGCAGGTCATGATTATATCAAATGATCTGTCAAAGAC
ATTTATTATTCACGTGTGCACAGACATGTGATTTTCAATGTTTATAATGT
ggtttacacttttttttttcaaaacctttttaaactaGGCTGCAACATGA
ACACTTATAAcataaacaattttaaattagTTATTTTGAAATAGTGACAT
AGTAGGAAAAAAAGTACAATAAATTAAATCTTTCACTGTATGTGTATAAA
GGACTAcaaatttatgttttgatttattgcAACTTTTGCTTCTTTCTTTA
ATATTGAATATATTGAATTTCGCAGTTTTCTGCTAAGCTTTAAAAATAGT
TCTCTAAATACTACCTGGCTTTTACACGAGGGCATGTCAAAGCTTGTGTG
ATACGTTATAGTATaccttttatttcatttatttttaagCAACTCAATAA
AATACTAAAAGTACAACCATGTCTATGTTTGCTGATGTTGATTTGTGTCC
TCCAGATCTGATCTTTGGTATCCGAGATGAGTTGATTGCAGATACTGACC
CACGTAAGGTGTCATTACTTATTGGTGCATATCGAACAGAGGAAGGCAAA
CCCCTGGTGCTTCCTGTTGTTCGCACTGTTGAGAAACAAATTTCAAATGA
CGAAACCTTGAATCATGAATATCTTCCCATAGAAGGAATGCCATCTTTTT
GCTCAGCAGCCAGCAAATTGGCTTTAGGTCCTGACAGTAAAGCTTTAGTT
GAGAATCGAGTTGCTTATGTTCAAACTTTATCTGGTACTGGTGCTGTCCG
TTTGGCTTTGCAATTCTTGAATAAATtccatgcaggaaaatctgtttATG
TACCAAAACCGACTTGGGGTAACCATAAAAAGATTGCCATTCATGCTGGA
TTTAATGATATTAAAGAATATGCTTATTTCGATCCTAATACCAAAAGCCT
TGATATCAATGGAGCTATTCGTGATTTAGAAGCTGCTGTGGAAGGCtcta
ttgttatttttcatgGATGTGCTCAAAACCCATGTGGCGTAGACCCATCA
GAAGATGATTGGAAAGCTTTCGGTCAAGTTGTTGTAAGGAGGAAATTGAT
CTGTGTTATGGATTTTGCTTACCAAGGTTTTGTATCTGGTGACCCTGATG
TTGATGCTTTTAGTTTACGTCACTTTGAAAGTCTTGGAGTTGAGTTATTT
TTCTGTCAATCTTTTGCCAAAATCTTTGGTTTGTATAACGAGAGAATTGG
TAATCTAGGCGTTGTCTGCAACGATAGTACTCTGGCTATGAATGTAAAAA
GCCATCTTAAAGCATTTATTAGACCAATGTATTCCAACCCGCCTGCTCAT
GGCGCACGTATTGTTGCTACAATCTTGAACAATAAAGCACTGGACTCAGA
ATGgaGAGAGCAGTTAAAATCGATGGCTGATCGGATCTTGAGAGCTCGCC
AACTTTTGAATTCCAAATTAAAGGAAGCTGAAGTTCCTGGAGATTGGTCT
CATATCCTTTCTCAGAAAGGAATGTTTACTTTCACTGGTTTGACTGCAAA
ACAAGTTGCAGTTCTCAAAGAAAAGCATCACATGTATATGCTGCCAAATG
GACGTATCAACATGTGTGCAGTGACCGAAGGTAATGTTGATTATGTTGTT
CAAGCTTTTAAAGATGTTGTCGTTAATGTTGTTTGAATAtaggtgatttt
tttaattaatcgAGTGAGGTGTTGGCAATGGTTTGATATTGTGTGAATTT
TGAattgcaaagaaaatttttaaccaaattttAATGAGTTTACGTTAACA
ACCTTTAATCCTTGAAAAGAAATTAGTATGATNGTTAACCAAAAAATTAA
TGAGTTTTACGTTAAGAATCTTTAATCCTTGGAAAGAAATTAGTATGATT
GATAATAGACTGAAAAAGGTTTAAAATCCCTTATCAACCTGATTTTGTCA
CTGGGAAAAATTAgtatttttagatatttcacaTCTATTGTCTGACTtag
atttttagtttttttttaacaatttttttagcGAGAAAGTTTTCCAGTGA
TGCaatctattttcatttttgagaaattctgaATAAGTCTAATTCTGCTT
AAGGAAATCCTTTTTTAGGCTTCTTTACTTTCTTCTTTGCTTCAGTTTAA
TGTTATGTTatgattttcaatatttaaaatttttttcaggtttACATAAT
GTTATCAGTTCATAGTCATTGAAatgtttgtttatttatttttatttttt
ttccgtaaATAATTGTGCATTTTTGTGGTGTGGCGTGgtgaaggtttttt
ttttttttttttttaaaaaattttccatttttgtgGTGTGGCGTgggaaa
ggtttttttttttttttttgtaatgagttaaaaacatttttataatgTGC
ACCATTGAAATAATCTTCTAAACATTGCATATATTATAGAACCATTAGCC
GATTGCCTGAAAGTGATGTAGAATCAGTCAATACGACACTTGAAACCAAA
TAGCTGTTGCGCCCgagatgtaatgtcagaagacattgcaaaggacatgg
gccccgtcaacggggggggggggggggcaggggGTCCATGgcccccccac
tttttggtggaccatgtcatacgtttttaagagttactattttaagctgg
tttgagaccaaagcaaaccacaaaaactattattctccccaaatagatat
cgttttaaggtgttttgagggtgtaaaaagttttcttcgtcgcccaacca
tggtgggcgacagtttttttccaaaatgttgtCCCCCTCACTCAAAAAGC
TCGTCGGGGCCCATGAAGGTGCATAttatgaaaacaataaaattactTCA
ACTGGACATTTTAAAATGGCACAGCTTATTTGATTGTTATTTAGCAAAGT
CTTATATAATATCACCTTGATGAGAAgacaaaaaatgtttattttatttt
tcttgacaattttctcatgattttatttgatttatagTTCCAGTGTAATT
TGATACTAGTATTTTTATGacagcaaaattaaaaaagaaatttcattagt
ttttttcaattatttatgtctctttaaaaaaatagcCTTCTGTTCCAAAA
TCTGATTTCGTTCCCTTGTGAATTAACTTGATTCAAcattttgttcactt
tttttcCAGCTATTACAAAGTTTTAGTAAAAGTGTTAATGGCATAGTGTC
AAAGGGAGTCCCTCCTTCTTAGATAAATTGATTTAGTTGCAATATTAAAT
TTTGAAGACCTTGGGTTGAAAGCTCAAAAGACAAGGGATGTCTCACTAAG
GGTACTAAAATACCAGTAAGGTCTAaattagtaatttttttaatcatttt
cagAATCTTTTATAatct Run BLAST on NCBI protein sequence of TCONS_00030748-protein >TCONS_00030748-protein ID=TCONS_00030748-protein|Name=TCONS_00030748-protein|organism=Clytia hemisphaerica|type=polypeptide|length=405bp
MSMFADVDLCPPDLIFGIRDELIADTDPRKVSLLIGAYRTEEGKPLVLPV
VRTVEKQISNDETLNHEYLPIEGMPSFCSAASKLALGPDSKALVENRVAY
VQTLSGTGAVRLALQFLNKFHAGKSVYVPKPTWGNHKKIAIHAGFNDIKE
YAYFDPNTKSLDINGAIRDLEAAVEGSIVIFHGCAQNPCGVDPSEDDWKA
FGQVVVRRKLICVMDFAYQGFVSGDPDVDAFSLRHFESLGVELFFCQSFA
KIFGLYNERIGNLGVVCNDSTLAMNVKSHLKAFIRPMYSNPPAHGARIVA
TILNNKALDSEWREQLKSMADRILRARQLLNSKLKEAEVPGDWSHILSQK
GMFTFTGLTAKQVAVLKEKHHMYMLPNGRINMCAVTEGNVDYVVQAFKDV
VVNVV Run BLAST on NCBI transcript from alignment at sc0000845:81372..86583+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030748 ID=TCONS_00030748|Name=TCONS_00030748|organism=Clytia hemisphaerica|type=transcript|length=5212bp|location=Sequence derived from alignment at sc0000845:81372..86583+ (Clytia hemisphaerica)
aaggaaaaagCATGCAAAGATATCAGAGGTAATAATGTGTGTCAGAGGAA
AAAAACACCTCCCATGCATGGCACAGTgaaatattgtaatttttaattta
gTACATGAcatgaaattattatttataCTCCAAACTTTTATCTTGAAGCT
TTAAACTATTTGAAcgctcaaaatatgtcaaataaacaaATTGCCAAAAG
AAGTAAATGGGCTGTTGATTTCAACTCACCACCTAAAGGGGCTCCATTAA
AGCTAAAAAGTAAAGACACTTTAGAATCAGTTGGATTTTCTGAAAGCCGC
GCAAATGTGGCACAAACTGGAAAAGAAACAGCTGATGCAAAACTGATATC
AAAGAGATCCTGGAACATTGCCCTTGGCCCTATCAAACAGGTGCCAATGA
ATTTGTTTATAATGTATATGAGCGGTAGCTCTATATCAATTTTCCCTATT
ATGGTTATCGGTATGATGgtgtttcgaccaatcaaagCTGTTATGGCCTT
CAAGGATACATTCAAAGTCTTGGATCAAGATTCTAATTCAGCAATTCTGC
AAAAGATTGTCTGGTTGTTCGGTAATGTGCTGGGAATTTGTGTAGCACTT
TGGAAATGTCACTCAATGGGAATATTACCAACTTCTCCCTCTGATTGGCT
TGCATTCAAAGAACACAGAGAACGGGTTGAGTTTGTCATTGGTGGACTCT
CTCAATAAGCTAACTTGTCAGAATCTTTCAACCACTTTTTAAGTCAACAC
AAGTTTTCAAGAACAacaagagataatattatataattATGAAACCCACT
TTTATATAATATTATTAGACTTTTGCGATGACTGGATAGAAATTAAAATA
TAAACATGTTTCATCAACATGATAAGTTTTTGCACAATTATTTTCAAGCA
TACTTTTCATGATAATTACTTCTATTTTTTGTTTCCTCGCTAAACTTATA
CTATACATATGATTTTGTgagattttataaaaaagctcGCTTTCAAGTGT
CTAGattttaagtttattttaatttataattATTATGATGAAgtatttaa
atttgaaatttgctttcaaaacttttgaaagtttttgagttTCTGAGTAT
CATAAGTTTTTTTGCCCAAGTGGAAATAGAATTTATAGTGAATCTCCTTG
AGAAATCTCTCGAAGCCATTTCAAACATTATCTTTGCTTAATGATGTCAT
TAGCTGATTTCCAATGTTGTATAATCATGATAAGCCAAACAACATGTTTT
CTTTTATTCCTTTAGCAGGTCATGATTATATCAAATGATCTGTCAAAGAC
ATTTATTATTCACGTGTGCACAGACATGTGATTTTCAATGTTTATAATGT
ggtttacacttttttttttcaaaacctttttaaactaGGCTGCAACATGA
ACACTTATAAcataaacaattttaaattagTTATTTTGAAATAGTGACAT
AGTAGGAAAAAAAGTACAATAAATTAAATCTTTCACTGTATGTGTATAAA
GGACTAcaaatttatgttttgatttattgcAACTTTTGCTTCTTTCTTTA
ATATTGAATATATTGAATTTCGCAGTTTTCTGCTAAGCTTTAAAAATAGT
TCTCTAAATACTACCTGGCTTTTACACGAGGGCATGTCAAAGCTTGTGTG
ATACGTTATAGTATaccttttatttcatttatttttaagCAACTCAATAA
AATACTAAAAGTACAACCATGTCTATGTTTGCTGATGTTGATTTGTGTCC
TCCAGATCTGATCTTTGGTATCCGAGATGAGTTGATTGCAGATACTGACC
CACGTAAGGTGTCATTACTTATTGGTGCATATCGAACAGAGGAAGGCAAA
CCCCTGGTGCTTCCTGTTGTTCGCACTGTTGAGAAACAAATTTCAAATGA
CGAAACCTTGAATCATGAATATCTTCCCATAGAAGGAATGCCATCTTTTT
GCTCAGCAGCCAGCAAATTGGCTTTAGGTGAGTAAACCAGACAGGTGatc
aaaaaaggttaaaaatccaCAAAGGGTATACATAGGAGCAAGTTTTGAGA
TCAATGATACAAGGGGAGCTTTTTTCCAAATCGAGAACGATTCCTTTTGT
GTGAAATATTATTGTCCTAGGTGTGAGTAAAAACATGTGAGGTAAATAAG
GCAGCTGATCAAAAGAGGTttaaaaaaatcctcaaaattgtGCAGAATTA
ATTTGAGAACAATGATGTCAAGGgagatttttctttaaatcaaaaagaaa
atccttTTCTAAAATAAGTTAAAGTCTCTTTAATTTGTGTTGAATTTTGT
GTGCATAATAAAGTTATTTTTATGAATTATATCTTATTTACAGGTCCTGA
CAGTAAAGCTTTAGTTGAGAATCGAGTTGCTTATGTTCAAACTTTATCTG
GTACTGGTGCTGTCCGTTTGGCTTTGCAATTCTTGAATAAATtccatgca
ggaaaatctgtttATGTACCAAAACCGACTTGGGGTAACCATAAAAAGAT
TGCCATTCATGCTGGATTTAATGATATTAAAGAATATGCTTATTTCGATC
CTAATACCAAAAGCCTTGATATCAATGGAGCTATTCGTGATTTAGAAGCT
GCTGTGGAAGGCtctattgttatttttcatgGATGTGCTCAAAACCCATG
TGGCGTAGACCCATCAGAAGATGATTGGAAAGCTTTCGGTCAAGTTGTTG
TAAGGAGGAAATTGATCTGTGTTATGGATTTTGCTTACCAAGGTTTTGTA
TCTGGTGACCCTGATGTTGATGCTTTTAGTTTACGTCACTTTGAAAGTCT
TGGAGTTGAGTTATTTTTCTGTCAATCTTTTGCCAAAATCTTTGGTTTGT
ATAACGAGAGAATTGGTAATCTAGGCGTTGTCTGCAACGATAGTACTCTG
GCTATGAATGTAAAAAGCCATCTTAAAGCATTTATTAGACCAATGTATTC
CAACCCGCCTGCTCATGGCGCACGTATTGTTGCTACAATCTTGAACAATA
AAGCACTGGACTCAGAATGGTAAGTATGagatattaaattttctttaaat
aattaaaaaatcaacTAATCATgatatataataataattatattaTAATC
AACCAGGCTTTTTGAGGAAATTCATAACTTCTTTCTATATTTCCTCCTTG
ATTTCACCTTACTACATTTTCGAATACTTGTTGAGTTTAATAAGTTATAA
TTGTTGTAAGAACGAAGTGTAAAAATGaagtttgaattattttttaggaG
AGAGCAGTTAAAATCGATGGCTGATCGGATCTTGAGAGCTCGCCAACTTT
TGAATTCCAAATTAAAGGAAGCTGAAGTTCCTGGAGATTGGTCTCATATC
CTTTCTCAGAAAGGAATGTTTACTTTCACTGGTTTGACTGCAAAACAAGT
TGCAGTTCTCAAAGAAAAGCATCACATGTATATGCTGCCAAATGGACGTA
TCAACATGTGTGCAGTGACCGAAGGTAATGTTGATTATGTTGTTCAAGCT
TTTAAAGATGTTGTCGTTAATGTTGTTTGAATAtaggtgatttttttaat
taatcgAGTGAGGTGTTGGCAATGGTTTGATATTGTGTGAATTTTGAatt
gcaaagaaaatttttaaccaaattttAATGAGTTTACGTTAACAACCTTT
AATCCTTGAAAAGAAATTAGTATGATNGTTAACCAAAAAATTAATGAGTT
TTACGTTAAGAATCTTTAATCCTTGGAAAGAAATTAGTATGATTGATAAT
AGACTGAAAAAGGTTTAAAATCCCTTATCAACCTGATTTTGTCACTGGGA
AAAATTAgtatttttagatatttcacaTCTATTGTCTGACTtagattttt
agtttttttttaacaatttttttagcGAGAAAGTTTTCCAGTGATGCaat
ctattttcatttttgagaaattctgaATAAGTCTAATTCTGCTTAAGGAA
ATCCTTTTTTAGGCTTCTTTACTTTCTTCTTTGCTTCAGTTTAATGTTAT
GTTatgattttcaatatttaaaatttttttcaggtttACATAATGTTATC
AGTTCATAGTCATTGAAatgtttgtttatttatttttattttttttccgt
aaATAATTGTGCATTTTTGTGGTGTGGCGTGgtgaaggtttttttttttt
ttttttttaaaaaattttccatttttgtgGTGTGGCGTgggaaaggtttt
tttttttttttttgtaatgagttaaaaacatttttataatgTGCACCATT
GAAATAATCTTCTAAACATTGCATATATTATAGAACCATTAGCCGATTGC
CTGAAAGTGATGTAGAATCAGTCAATACGACACTTGAAACCAAATAGCTG
TTGCGCCCgagatgtaatgtcagaagacattgcaaaggacatgggccccg
tcaacggggggggggggggggcaggggGTCCATGgcccccccactttttg
gtggaccatgtcatacgtttttaagagttactattttaagctggtttgag
accaaagcaaaccacaaaaactattattctccccaaatagatatcgtttt
aaggtgttttgagggtgtaaaaagttttcttcgtcgcccaaccatggtgg
gcgacagtttttttccaaaatgttgtCCCCCTCACTCAAAAAGCTCGTCG
GGGCCCATGAAGGTGCATAttatgaaaacaataaaattactTCAACTGGA
CATTTTAAAATGGCACAGCTTATTTGATTGTTATTTAGCAAAGTCTTATA
TAATATCACCTTGATGAGAAgacaaaaaatgtttattttatttttcttga
caattttctcatgattttatttgatttatagTTCCAGTGTAATTTGATAC
TAGTATTTTTATGacagcaaaattaaaaaagaaatttcattagttttttt
caattatttatgtctctttaaaaaaatagcCTTCTGTTCCAAAATCTGAT
TTCGTTCCCTTGTGAATTAACTTGATTCAAcattttgttcactttttttc
CAGCTATTACAAAGTTTTAGTAAAAGTGTTAATGGCATAGTGTCAAAGGG
AGTCCCTCCTTCTTAGATAAATTGATTTAGTTGCAATATTAAATTTTGAA
GACCTTGGGTTGAAAGCTCAAAAGACAAGGGATGTCTCACTAAGGGTACT
AAAATACCAGTAAGGTCTAaattagtaatttttttaatcattttcagAAT
CTTTTATAatct Coding sequence (CDS) from alignment at sc0000845:81372..86583+ >TCONS_00030748 ID=TCONS_00030748|Name=TCONS_00030748|organism=Clytia hemisphaerica|type=CDS|length=3654bp|location=Sequence derived from alignment at sc0000845:81372..86583+ (Clytia hemisphaerica)
ATGTCTATGTTTGCTGATGTTGATTTGTGTCCTCCAGATCTGATCTTTGG
TATCCGAGATGAGTTGATTGCAGATACTGACCCACGTAAGGTGTCATTAC
TTATTGGTGCATATCGAACAGAGGAAGGCAAACCCCTGGTGCTTCCTGTT
GTTCGCACTGTTGAGAAACAAATTTCAAATGACGAAACCTTGAATCATGA
ATATCTTCCCATAGAAGGAATGCCATCTTTTTGCTCAGCAGCCAGCAAAT
TGGCTTTAGGTCCTGACAGTAAAGCTTTAGTTGAGAATCGAGTTGCTTAT
GTTCAAACTTTATCTGGTACTGGTGCTGTCCGTTTGGCTTTGCAATTCTT
GAATAAATtccatgcaggaaaatctgtttATGTACCAAAACCGACTTGGG
GTAACCATAAAAAGATTGCCATTCATGCTGGATTTAATGATATTAAAGAA
TATGCTTATTTCGATCCTAATACCAAAAGCCTTGATATCAATGGAGCTAT
TCGTGATTTAGAAGCTGCTGTGGAAGGCtctattgttatttttcatgGAT
GTGCTCAAAACCCATGTGGCGTAGACCCATCAGAAGATGATTGGAAAGCT
TTCGGTCAAGTTGTTGTAAGGAGGAAATTGATCTGTGTTATGGATTTTGC
TTACCAAGGTTTTGTATCTGGTGACCCTGATGTTGATGCTTTTAGTTTAC
GTCACTTTGAAAGTCTTGGAGTTGAGTTATTTTTCTGTCAATCTTTTGCC
AAAATCTTTGGTTTGTATAACGAGAGAATTGGTAATCTAGGCGTTGTCTG
CAACGATAGTACTCTGGCTATGAATGTAAAAAGCCATCTTAAAGCATTTA
TTAGACCAATGTATTCCAACCCGCCTGCTCATGGCGCACGTATTGTTGCT
ACAATCTTGAACAATAAAGCACTGGACTCAGAATGgaGAGAGCAGTTAAA
ATCGATGGCTGATCGGATCTTGAGAGCTCGCCAACTTTTGAATTCCAAAT
TAAAGGAAGCTGAAGTTCCTGGAGATTGGTCTCATATCCTTTCTCAGAAA
GGAATGTTTACTTTCACTGGTTTGACTGCAAAACAAGTTGCAGTTCTCAA
AGAAAAGCATCACATGTATATGCTGCCAAATGGACGTATCAACATGTGTG
CAGTGACCGAAGGTAATGTTGATTATGTTGTTCAAGCTTTTAAAGATGTT
GTCGTTAATGTTGTTTGAATGTCTATGTTTGCTGATGTTGATTTGTGTCC
TCCAGATCTGATCTTTGGTATCCGAGATGAGTTGATTGCAGATACTGACC
CACGTAAGGTGTCATTACTTATTGGTGCATATCGAACAGAGGAAGGCAAA
CCCCTGGTGCTTCCTGTTGTTCGCACTGTTGAGAAACAAATTTCAAATGA
CGAAACCTTGAATCATGAATATCTTCCCATAGAAGGAATGCCATCTTTTT
GCTCAGCAGCCAGCAAATTGGCTTTAGGTCCTGACAGTAAAGCTTTAGTT
GAGAATCGAGTTGCTTATGTTCAAACTTTATCTGGTACTGGTGCTGTCCG
TTTGGCTTTGCAATTCTTGAATAAATtccatgcaggaaaatctgtttATG
TACCAAAACCGACTTGGGGTAACCATAAAAAGATTGCCATTCATGCTGGA
TTTAATGATATTAAAGAATATGCTTATTTCGATCCTAATACCAAAAGCCT
TGATATCAATGGAGCTATTCGTGATTTAGAAGCTGCTGTGGAAGGCtcta
ttgttatttttcatgGATGTGCTCAAAACCCATGTGGCGTAGACCCATCA
GAAGATGATTGGAAAGCTTTCGGTCAAGTTGTTGTAAGGAGGAAATTGAT
CTGTGTTATGGATTTTGCTTACCAAGGTTTTGTATCTGGTGACCCTGATG
TTGATGCTTTTAGTTTACGTCACTTTGAAAGTCTTGGAGTTGAGTTATTT
TTCTGTCAATCTTTTGCCAAAATCTTTGGTTTGTATAACGAGAGAATTGG
TAATCTAGGCGTTGTCTGCAACGATAGTACTCTGGCTATGAATGTAAAAA
GCCATCTTAAAGCATTTATTAGACCAATGTATTCCAACCCGCCTGCTCAT
GGCGCACGTATTGTTGCTACAATCTTGAACAATAAAGCACTGGACTCAGA
ATGgaGAGAGCAGTTAAAATCGATGGCTGATCGGATCTTGAGAGCTCGCC
AACTTTTGAATTCCAAATTAAAGGAAGCTGAAGTTCCTGGAGATTGGTCT
CATATCCTTTCTCAGAAAGGAATGTTTACTTTCACTGGTTTGACTGCAAA
ACAAGTTGCAGTTCTCAAAGAAAAGCATCACATGTATATGCTGCCAAATG
GACGTATCAACATGTGTGCAGTGACCGAAGGTAATGTTGATTATGTTGTT
CAAGCTTTTAAAGATGTTGTCGTTAATGTTGTTTGAATGTCTATGTTTGC
TGATGTTGATTTGTGTCCTCCAGATCTGATCTTTGGTATCCGAGATGAGT
TGATTGCAGATACTGACCCACGTAAGGTGTCATTACTTATTGGTGCATAT
CGAACAGAGGAAGGCAAACCCCTGGTGCTTCCTGTTGTTCGCACTGTTGA
GAAACAAATTTCAAATGACGAAACCTTGAATCATGAATATCTTCCCATAG
AAGGAATGCCATCTTTTTGCTCAGCAGCCAGCAAATTGGCTTTAGGTCCT
GACAGTAAAGCTTTAGTTGAGAATCGAGTTGCTTATGTTCAAACTTTATC
TGGTACTGGTGCTGTCCGTTTGGCTTTGCAATTCTTGAATAAATtccatg
caggaaaatctgtttATGTACCAAAACCGACTTGGGGTAACCATAAAAAG
ATTGCCATTCATGCTGGATTTAATGATATTAAAGAATATGCTTATTTCGA
TCCTAATACCAAAAGCCTTGATATCAATGGAGCTATTCGTGATTTAGAAG
CTGCTGTGGAAGGCtctattgttatttttcatgGATGTGCTCAAAACCCA
TGTGGCGTAGACCCATCAGAAGATGATTGGAAAGCTTTCGGTCAAGTTGT
TGTAAGGAGGAAATTGATCTGTGTTATGGATTTTGCTTACCAAGGTTTTG
TATCTGGTGACCCTGATGTTGATGCTTTTAGTTTACGTCACTTTGAAAGT
CTTGGAGTTGAGTTATTTTTCTGTCAATCTTTTGCCAAAATCTTTGGTTT
GTATAACGAGAGAATTGGTAATCTAGGCGTTGTCTGCAACGATAGTACTC
TGGCTATGAATGTAAAAAGCCATCTTAAAGCATTTATTAGACCAATGTAT
TCCAACCCGCCTGCTCATGGCGCACGTATTGTTGCTACAATCTTGAACAA
TAAAGCACTGGACTCAGAATGgaGAGAGCAGTTAAAATCGATGGCTGATC
GGATCTTGAGAGCTCGCCAACTTTTGAATTCCAAATTAAAGGAAGCTGAA
GTTCCTGGAGATTGGTCTCATATCCTTTCTCAGAAAGGAATGTTTACTTT
CACTGGTTTGACTGCAAAACAAGTTGCAGTTCTCAAAGAAAAGCATCACA
TGTATATGCTGCCAAATGGACGTATCAACATGTGTGCAGTGACCGAAGGT
AATGTTGATTATGTTGTTCAAGCTTTTAAAGATGTTGTCGTTAATGTTGT
TTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030748-exon-sc0000845-1491911889:81372..83348 | TCONS_00030748-exon-sc0000845-1491911889:81372..83348 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1510915933:81372..83348 | TCONS_00030748-exon-sc0000845-1510915933:81372..83348 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1575043694:81372..83348 | TCONS_00030748-exon-sc0000845-1575043694:81372..83348 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1491911889:83715..84390 | TCONS_00030748-exon-sc0000845-1491911889:83715..84390 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1510915933:83715..84390 | TCONS_00030748-exon-sc0000845-1510915933:83715..84390 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1575043694:83715..84390 | TCONS_00030748-exon-sc0000845-1575043694:83715..84390 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1491911889:84619..86583 | TCONS_00030748-exon-sc0000845-1491911889:84619..86583 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1510915933:84619..86583 | TCONS_00030748-exon-sc0000845-1510915933:84619..86583 | Clytia hemisphaerica | exon |
| TCONS_00030748-exon-sc0000845-1575043694:84619..86583 | TCONS_00030748-exon-sc0000845-1575043694:84619..86583 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000845 | supercontig | sc0000845:81372..86583 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008483 | transaminase activity |
| GO:0003824 | catalytic activity |
| GO:0030170 | pyridoxal phosphate binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006520 | cellular amino acid metabolic process |
| GO:0009058 | biosynthetic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0009058 |
biosynthetic process |
| biological_process |
GO:0006520 |
cellular amino acid metabolic process |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0030170 |
pyridoxal phosphate binding |
| molecular_function |
GO:0008483 |
transaminase activity |
Blast
BLAST of TCONS_00030748 vs. Swiss-Prot (Human)
Match: AATC (Aspartate aminotransferase, cytoplasmic OS=Homo sapiens GN=GOT1 PE=1 SV=3) HSP 1 Score: 395.971 bits (1016), Expect = 9.385e-124 Identity = 195/396 (49.24%), Postives = 260/396 (65.66%), Query Frame = 3
Query: 1722 SMFADVDLCPPDLIFGIRDELIADTDPRKVSLLIGAYRTEEGKPLVLPVVRTVEKQISNDETLNHEYLPIEGMPSFCSAASKLALGPDSKALVENRVAYVQTLSGTGAVRLALQFLNKFHAGKS-----VYVPKPTWGNHKKIAIHAGFNDIKEYAYFDPNTKSLDINGAIRDLEAAVEGSIVIFHGCAQNPCGVDPSEDDWKAFGQVVVRRKLICVMDFAYQGFVSGDPDVDAFSLRHFESLGVELFFCQSFAKIFGLYNERIGNLGVVCNDSTLAMNVKSHLKAFIRPMYSNPPAHGARIVATILNNKALDSEWREQLKSMADRILRARQLLNSKLKEAEVPGDWSHILSQKGMFTFTGLTAKQVAVLKEKHHMYMLPNGRINMCAVTEGNVDY 2894
S+FA+V P L+F + + D DPRKV+L +GAYRT++ P VLPVV+ VE++I+ND +LNHEYLPI G+ F S AS+LALG DS AL E RV VQ+L GTGA+R+ FL +++ G + VYV PTW NH + AGF DI+ Y Y+D + LD+ G + DLE A E SIV+ H CA NP G+DP+ + WK V+ R L D AYQGF SG+ + DA+++R+F S G E F QSF+K FGLYNER+GNL VV + + V S ++ +R +SNPPA GARIVA+ L+N L EW +K+MADRIL R L ++L+ + PG W+HI Q GMF+FTGL KQV L + H+Y+LP+GRIN+ +T N+DY
Sbjct: 5 SVFAEVPQAQPVLVFKLTADFREDPDPRKVNLGVGAYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDDSPALKEKRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRSYRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVMKHRFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVGKEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLTTKNLDY 400
The following BLAST results are available for this feature:
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