XLOC_026771 (gene) - C. hemisphaerica

Overview
NameXLOC_026771
Unique NameXLOC_026771
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003863:466..6952+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026771 ID=XLOC_026771|Name=XLOC_026771|organism=Clytia hemisphaerica|type=gene|length=6487bp|location=Sequence derived from alignment at sc0003863:466..6952+ (Clytia hemisphaerica)
CGACTGTTTTGGCAAGTTAAGgaaagaaaatctttgaaaatcctGGACTG
GAGAGGCATGAAAGTGCCAAAATGACGACAAAGAAGAATCATAAAAGATA
TAGAATATAAATCAGGTTAATAGAATTGTTATTTGTTATTCTATGTGCAT
TCTATCTTGCTTTGATGTTCTTCTATTTTACTCTTCACTCAAACCTTTTC
AATGTGATGTGATGTGAAGTGAGTGaaggttattttttttttaataagtt
aGCAGGTTCAATTTTGAGGTATTCAAGGTCATTTGCACGCACTGCTATTG
CCTTTATGATCCTTTGGTGTATTGGTACAATTGTGAGAGGTCTAGATAAA
ATAAACTTGGTTGTTGGTGATTTCCTATTTTCATCCTTTCTGGGAAATAC
GAAATAGGCTATCCCCGGTATAGCGCTACCTGGTAAGTGtgaggtgggtt
ccgtctccctcGTAGATCTtatcttgggaagttgatcttcaaattacgTA
GTTTttaaggttggcttggctcaaattttttcatctatggctcaaatttt
aggcaatttctcatagttttcgaaaatgttaatttcattaaaaaggacCN
CTCCCTCGTAGATCTtatcttgggaagttgatcttcaaattacgTAGTTT
ttaaggttggcttggctcaaattttttcatctatggctcaaattttaggc
aatttctcatagttttcgaaaatgttaatttcattaaaaaggaccctgcc
gacgcaccagaCTTttttaacgaacaccggacacgcgatagtctggtgta
aaatgagaattttttttaccaccggacaatctctacaccggacttatgga
agtcggatgtccggtgtcggagaaggatatttttttccaccggacaatcg
aAACACcagacatgaccagtccggacaaatacaccggacagtccggtgcg
tcggcagggtcgtccttattaaaaagcgctgggttattttttcatgaatc
cctttacaAGTTTTGTGGCACATTTTTgtgcttgcgagtcaagtaaatGA
TATAGCACTTTCGTAGCATTAttttttgatatgcattttggtgggacgct
agtgtgtaatatcaacatccctcgtctaattccaacacccttctttagag
acNTTGCTTGCGAGTCAAGCAAATGATATAGCACTTTCGTAGCATTAttt
tttgatatgcattttggtgggacgctagtgtgtaatatcaacatccctcg
tctaattccaacacccttctttagagacaggaataacatgaaagcttgaa
tcactgattgaaaaaggattattcctctctgatcgctaagcaaagaaaaa
cagtttcaacctttctttcaatttcagctgataaaaagggtgttggaatt
agaggagggatgtcgacattagaccaagttacgatACAGTAAtcatggct
ccgactggggttctaggtccccccgctaaatttaggtcccccctaagaac
aaggtccccccagcctgataaatttttaggtcccagtataataggggaaa
aatttttgatgaataattttttttcaatgtgaaTTTTTACCATTTAGTCA
ATGAAAACACAAGTAAATAAACAGTAAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgg
gggggggggggggtgcgagcCATGGTAATTGTCTGTGACATCATTGTTCT
TGCCTGGGCTGCAAACattgcaattctttcaattaaaaaaaaagcagcca
aattatataagcaattttacacAACATTTGAAAcatgaaacgcatgcaaa
ctttaataattttccttgtgcccatcattaaaattttacaactttattac
gcttcaagtcaggTGATAAAGATAATTTGCGCGCTTAATTggcctggttt
ccccttccttatttatcacaaacacacgctctaggcgctaagaggccgCC
CCCATAatggccagtatggcggtcacaataaattcaaaaggaaaccggat
tctttttattattttcggttcacggtaaaaaggtataacaaaaaattcct
cgcgtgcaagaTGTTGTTATGATTTGGATATCTTccttgaaagcatgcta
attagttttttagtgatgactacatcgttaaagttttcttttcaaacata
AGTAATAGCACATTTCTCATAAtatcaacaatctgtgacgtgatggGGGG
AGTACAATTTATTGATTGGATTggtaactttggtatgtatttttttatgt
ttaagattttttattttgaagaccagcATGCAGCTATGCCGAAATAacaa
gacgcatgtcgatattggACAATTCTACGGTACTGTAAAATctaaataga
aattgaattgtgtATTTTAAAATACGCAGTTCCTTtataactcaaatcaa
attactttggaggttcggtgaaatggtggccgaattgccgtcccatgttt
tatcAGATAGTCCCTTTTAGTCATCTTTTGACTGCATTTTAAATTCTCTG
TGCTCTAAAGAAGGCCAATGTTTGATGCCCTTTGATACCCTGTCAAGATC
AACTATCTCAAAACAGGGGTTGGGTTAGGAGACTCTATTTTGTGGTAAGG
CAGACATCCATAATTCAAACCTTCCAGATGAAACATCAGTCATCTATATA
ACAAGATGTGTTTGTGaaaacaaggatgagagttacttGAATCAAGCTCA
AGAtctcaagaaaaataaataaaaattgaaaacttgagACAATTGAAATG
ACTGATTGCTAACATGCAAGAGCAAGCttatcaaccaatcaaaatgtgTT
ATTCAATTCCTGAGATATAGAGCTTCGATTTGTTGGGCCTTGATTATGGG
CTGCAGAGTGAAGATAATTCTGCACATCTGCACAAAAGATCCCTTAACAA
TTAAGTGCTTTTTCTAAGTAATTGGTTCATTCAGGTCAATTACATAGGTT
TTTGGGTTTCTAGCATCCCTTCAGCTAGTTCAAAATGCAGCTCACACGTC
GCAGGTCAGCCCTggcaattcaatttttttggccTCGGCATTTTTTTGCC
GAAGCAAATGGCTAAATTTGCTGTTTGCCTTGGCAGAATaggcatttttc
atttttcatttttcatttttcatttttcatttttcatttttcccaattta
aaatttaaaattgtgtTAAAAAAAACAGACAGCTGGAGATCTATAATTGT
TTTTGTAGTTCTTCGATTGTTTCGACAGTTATCATTTTTagtaaaagtct
tttgaaaaatttggcattttttttgCCGACGCAAACAGACTATAAACCAA
TTTACGCCAGGACTGCAGGTTGCAGGTCAATTCATAGACTTTGGTCACAG
GTCACACAAACCACAGACTTGAAGATTGTAACCCGTTTGTGACATATGAT
CACAACATGCTTCTgtaaatattatatgtaatggaaatgcTTCAGAATGA
TTTTTAatattattaatttcgcctagcgaaagtattacggtCAGCTTCTA
CTGAAAGCGAAAGTAGAGTATCGGTAGTATTAGTTTGTGTAACCACGgat
gcttccgtataaaagattacatcatgaatatcattaaaTGAATTGCGAGc
atattttagtttattttcttataagcatatagatatactttataagaatc
aaatcaataactcttgatagatggtgatatacctttcggtaattagttct
tacagagtaaacaagggacggcgcacaatatgggcatatttatttttctt
ataagcatctactttataagaatcaaatcaatctcATGATAGAgagtgat
atacctttcggtaattagttcttacaaagtaaacaaaggaaggtgaacaa
tatgagcatatttatttttcttataagcatttactttataggaatcaaat
caataactcttgatagacggtggtatacctttcggtaattagttcttaca
aagtaaacaagggatggcgtatagtatgagcatatttacttttcttataa
gcatttattttatataagaatcaaatcaataactcttgatcaACAGTGAT
ACACCTTTCGGtatttagttcttacaaagtaaacaagggacggcgcacaa
tatgagcatatttattttttataaacatatactttgtaagagttcttaaa
aattaaacagcaaTTGTTCTTTAAATTGGTCTAATTGTTTTAGTGATTTT
AAGtctcgttgttcttgtaaaattgttacatcaaggctcgatgtaaagta
gatttcagattaccTTCAATCTCTAATTCTTCTTTTTCACatgcagttca
aattctaggcaAAATCTTTGACTTAAAGTCGTCTTGTTATATTTTAAATA
agtgtttttcaaatattatctTTGCGTTTTTTATATATAGTAATTAAAAC
TGACCTGTCAGCACTGACCTGTGACGTCACGTCTGTGTTTTAAACTAGCC
GGCATTCCTTTGCTCACAAGTCAAGCAAACAATAAAGCGCTTTCACAGCA
TTAATCTGTGATGCACATTTTGGCATAATactagtgtggctaactgtcGG
GACATTTCTTGCGTCCTTCCAAAGATCATGATCTGTATTATAGTGTATGT
TTTTCTATTGATTTCTTTCTAGATATGTTAAAAAGTTTCCACTTGAAACA
GCTATAGATAGAATGTGGCTCTCTACTTTCAAAGAAATATTCATGCTTTC
ACTGTTTGCATTAGTCAAAGCACAAAGTATGTattatgataatttatttt
tggCTAGATCCTGCAAGATCAATTTTGAAATAGTTGTGTTGTTTTTCAAT
CAAGGATGagcatagtgcggaaaggggtctgatccccccccttcttaaat
gatcccccctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATTTTCTTTATAGATCACTGCTCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043022TCONS_00043022Clytia hemisphaericatranscript
TCONS_00043023TCONS_00043023Clytia hemisphaericatranscript
TCONS_00043024TCONS_00043024Clytia hemisphaericatranscript
TCONS_00043025TCONS_00043025Clytia hemisphaericatranscript
TCONS_00043026TCONS_00043026Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003863supercontigsc0003863:466..6952 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.37	4.23	1.97	2.31	7.71	5.87	5.51	7.31	8.26	6.52	15.33	6.25	11.44	8.68	4.16	6.09	6.01	4.39	7.97	8.86	9.52	16.45	7.81	8.33	8.57	14.26	17.03	18.05	16.46	17.07