XLOC_026991 (gene) - C. hemisphaerica

Overview
NameXLOC_026991
Unique NameXLOC_026991
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0004087:1..7274+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026991 ID=XLOC_026991|Name=XLOC_026991|organism=Clytia hemisphaerica|type=gene|length=7274bp|location=Sequence derived from alignment at sc0004087:1..7274+ (Clytia hemisphaerica)
TAAACTAGTTGAAAGCTATGACCATGTTGTATCAGAGCACAAGCTGATTG GAAAAACCATAGgtcaagtttttaatgaaactgTGGAAAAGTTTCCTGAC CATGAAGCTGTTGTGTTTCATCGAGATCAAAAGAGGATGACATTTGCACA GTTGGATGAAAAGGTTATTTGAATTGTTAATAGACATAATAAGTTATTTC TTTAAACGTAATGTTTTAAATAACTTCATTCTATTTATTCATTTCTAGAA AATACCATAATCTATCTCTAATATCTCACCCAGGTGAATAAATTAGCTGC AAGCATTATTGGACTTGGTTTGCAAAAAGGAGATCGTGTTGGTATTTGGG GACAGAATCATTTGGAATGGATGATTACTTTCTTAGCATCTGTCAAAGCT GGAACTATTCTTGTAAGAAGTTTTTATAATGATATTCAAAATTGCAGCTC CTAAACAATTagcaatatatatatatatatatatatttctttCTTATAAT CTTGGCTCAAGCTATGAGCACTATACAATGCTTTATATAAAAACATgatt tcaacctggattttggagtacatttttttatataataggTAAATGTAAAC CCTGCATATCAGTCCAATGAGTTGGAGTATGCATTGAATAAGGTAAGAta tctttactttttataaaaacttttctttgaattataataaaaaaacaata cagTGATTAAAGTTCCTCCGTCTCAGACAgatttccgtctcacagaaaaa acagaaaagttttcGGTCTCATTTAGAAATGGTTATTTACCAAGAAAAAG TGATTTTATTCTCTAGAAAAATTCCATCAGAAAGAAATCTCGTATTAAAA CTGTGTTTATGGCTGATGACCTTGTATATACATAGTATGACGTtcattta tttttcaacctattttagatagatagatattttTGCTGTATGATaggcat tttaagaacattctgagTTGTTTGAGTTTTAttttaattaacaaattttt tAGTGCCTTTCTAACCAATCTAGGtggtaaaaaatctgaaaattgttTGG CCCTTGGCCCCAACCGTGGTGGGGCCTGCGGATGTCACTGTATACCAAAA TATCtccatcaaaaaattttctgtctcacagaaaaaaattttgacaatgA TAATATTAGAATTGCCGTGCAAAACTCTGTATTAACTCATCCTAAATATT TCAAAGCATCTATatctcaaaattgaaattaggCTAACTCTTTCCATTTC AATCAGGTTGGAATGAAGGCACTGTTCATGACACCAGAattcaaaacatc aaattaTTATGATATTCTTCAAAATGTGACACCTGAAATTCTACATTCAC ACCCTGGTCAGCTCAAGTCGAAAAAGTAACCTCTTTTGATAATTTGTTTA CCCACCTTCTCATTCTTAAGCAATCTTTCAGCAATAACTCAACTTTCATC ATCATGTAAACAATTTCAATTAAAGATTTATgctttctatttttagaatt ccTACACTGGAATCAGTGATTTTGACAGATGGCCCAGCAATGAGGTAGTC TTTTGCTTTTCTTCATCTATCTATTACATGTACAGTAGTTAATTTACTTA GGTGTGTTTTCTAatcacatttttttgcttgagccTTCTCCTAAAATCAA AACTATGTCTGAAGATAAAAGCCTATGGCAATATCAATGATAAATTATAT ACAAGAGTTCGTTGGTGGACCAGCTAGTATTAATTTGCAAATTATCTTGA GTGATGTGCCAGCTAAAGCACATGATTCAAAATTCCAGCAGAACTAATTA GAGAGATTCATCACAAAATGTAGGATTTATGTCCCTTATTAATTATCAAC TATTCTTTAATTTCAGTGGTGCATTTTCATTTGAAGACGCTTTAGCAATt ggaggaaaagaagaaaaattaaaagtagAACAACTTCAGAAGGGCATTCA GTTTGATGATCCTGTCAATATTCAGTTTACATCGGTAATGATAATTCTTC TGCTTTTCTAATTTTCATATTCAGCAAGCAAAGTATTCATTAAAAAAGGT GCTGATATGGAAATTTTCTGTCTATGTATCCTCACATTtgcaaatctttt gaaaatataatgagccagtttgagtaaagaaaacaatttttaagttttca taCTCGAAGTTTCAGGTCATACAGGATACAGTGATATaaattttttctat aaaaattcACAATTCAatgtcttcaaaaattttctgaggtCAATTCGAAA TTTTTCTGAGGGCAATTTAGAATCATTCGAAAGTCTGGAGGAGAAATTTC TATCTGTGACGGCAATTGGCGATGATTTCAGTTCGCTTATTTAACAAGTT CCGACCTGGAAAGGTGGAAATTTAACAAGTTCAGAAAAGTGGTAAATATA TTGAATTTATTTTCACAGGGTACAACAGGGAATCCAAAAGGAGCCACCCT CACTCATCATAATTTGGTCAATAATGCTGCTGCGATTGCTTTTGGTTTGG ACTTCACTCCTGTTAGTAAGATTTCAACAATTTTCCATCTTTCTTGTCTA ATAAAAGGCTGTGGGTTAATCTCTTCAAGATTTTACCTGttcaattttct attttcaggtTGACCGTGTTTGTATACCCGTTCCACTTTACCATTGTTTT GGCATGGTTCTTGGAAGGTATGTTTTTAGTAATCTTATATGTGTTTTTTT AAGGGAATTTTGCTTTTTCATGTCGTTTCTTGTATCTCTCGATAAAAAAC TGTTACTTTAAGCTTTATGACGTTCATTTAAAGAACTTAAGACTTCTGAA AATCTTAATAAGAGATGAATCAAGGACGGCTTTTGTGAATAGTTTTGCGA TGGAGATTTCATTGGATGGCGAGAAAATATTCATAGAAAATGTATGTTTT TGTATTTCTAACCATTTATAGTATGGCATGCTTGATGACTGGTGCTGCTC AAGTTTTCCCTCAACGTGGATTTGATGCAGAAGCTACTCTGGATGCCATT CAAACAGAAAGGTTTAATATTAATTCATATTTATGTATTTAATGTTTTAT CATTGATTTTCTAtaaatcaactgatgaatgcctAAACAAGAAACTTAAA GTTTTGAGAAGAAACACACCGTTTCTTTAATCTTTATGTAATGTTTTATC AAGTATTTATAGTTGTTATTCATCACTGTAActgttattattttattttt tcagctgTACAGCAATTTATGGAACTCCTGCAATGTTCATTGATATGTTA AACCATCCAACCTTTCCAAACATCAATTTTGGGTCAATGAGAACAGGTAT TAAAACATTGCATATCACACGTTACACACTTTGCATAGGCTGAACTACTT GAAGATGTGTCCACTTTGTTGAGTCGAAGTCGAGTCTAAGTCCCCCATGT TGTTTTCTATTTCATGGTCagatttttgagtattttaatTTAAAACAATC GAACCCCCTGGTTGACAAACAAAACAATTGAGAACACTATGAGGAACTAG TTAGCCACAACAGTGGACCTAATTATGTTGATATAGGAAGACTAGTCAGT TCAAGTAGTAAGATATCAGCGCTCTGTATCCATGTTTCAAAGTAAGTTTT ACTGTTTTTGAAGGTCTGTTGATAAAAAATGATAAGCTTGCAATGCATCG AACAAGCACTCTCTTGAATTTATAAATGGATTTAAGTTGAAGTCTCTTAT TTGATTGTTCATATTTTGTTTGTGTTCAAATGCTTTTGAGAATAATTTCC TCCTTTTTTAACTCTCTACAGTGGCTTTTTGAGTCGATTCTTGTTTCCCT TAACAAATTTATATTCTTATTTAAGGATTGGTGAATGTAAATCACTTCTA TTTTGCTTCTCAACTAGTGTCGTCTGTATAATTTCTTTACCATTAAACAA GGAAGTTTTTATTGACATTTGTTCCGTTATTTTATATAGTCTAGTGTTGC ACCATATCTGTTTCATAGGAATTATGGCAGGATCACCATGTCCAATTGAA ATTATGAAGAAAGTGATCAATGATATGAATTGCCCTGAGATGACTgtaag aaaatacatttttttctaaaatgttacTTCTTTTTAAATCGTATAAAACC ATACTTTACAGGttaaaaaccccaaaataaAATACAGAAATTTTATATTG CtaatttatttcaattattgTCTACTGTAAGTCTAATCATATGCAGAGTT TAAGTAATATGTTCGCTCATTTTTATGTTCGTTATTTCAGATTGCATATG GGTTGACAGAAACGAGTCCAGCCACCAATTTGACTTCAAGAGATACCCCT GTAGAGCTACGCGTTTCAAGTATTGGAAGAGTAATCCCACATGTTGAGGT GAGGTTAACAAATACTGACACTTATAAAATTTGCTTTTATCAAGGCCACA GAGCTTaaaggccggtttccacttgcgcgcgctacgATCGCACTTttggg cttcaatcctttttgcttggaaaaaagattacgtcataaaaatgtagcgc gcgcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccaatggagtt gcttcatttttcttttgaccaatagcgtggaagctttgctcgaaaaagcg cgatcgaagcgcgcgcaagtggagaccggcctttattcATACCCTGGAGG CAGTTTCttaatcccagccaagcaaaatattttgatcggagtttttttga aagtggtaacAGCATCGAGAGCGCAAGATCTACTTCACTTGCACGCTATA gtgtgatgtagcgccgtttgtcgttaggGAAAGTTTTAATACTACATGga ttctttgcgggtaccaccTTCAACAAAACTCAGATCAAATATGGCGGATA TAACTTGGTCCAGGCATTATAAAGGTCATTAATTAAGACGCATTTTTAGC CTGGTTTTAATAACACTCTTTCATGTAGTatttttccacaattttcaCTG CTGTGGTTAATCTAAGTATACATTACAAAAATTTCTAGCATTATCAGATG CTCATCAGCTATTATACTGGAAATCTCGCAACAGCCTTTCTGCATCAGGT GTTATTTAGAATTCACTTAACTTATCTTGTTATAAACACAAACACATTGT AAGTTGTTTTTTATGCTCGTTGGATGACCCGTTGGTAAACCCTAGGACTG TTTCAGTCATCCTTTCTTCTAGATATTTATATCCCAACATCCCAATCCAC CATTTTGCCTAGCTAGTATAAAATGAAAGCATTTATAGCAATAtatagca ttttcatttttattagaCCAAGATAATTGACGAGGAAGGCCACATAGTTC CAGTCAACACTTCAGGAGAACTGTGTTTCAGAGGTCATTGTGTTTTCCCA GGTTATTGGGATGACGCCATCAAAACTAAGGAAGCCATTGACGAAAATGG TTGGTTTcattcaggagatttgggtcaAATTGATGAAAATGGATATTGTA AAGTGGTTGGTCGTTTAAAAGATATGATTATTCGTGGTGGCGAAAATATT TATCCAACAGAGGTGGAAAACTTCCTTCATAATCATCCTGATATTGAAGA TGTTCAAATTGTTGGAATACCCGACGAACGTTTCGGTGAAGAATGCTGTG CATGGATTAAgtaattttcatatttcaaattcGCATATCAAATTTTTCCA GCCTAATATTTAATATGAGCTGATATTTCTTTTGATTAGGATTTCGCTAA AAAATTCCNTTCGGTGAAGAATGCTGTGCATGGATTAAgtaattttcata tttcaaattcGCATATCAAATTTTTCCAGCCTAATATTTAATAGGAGCtg atatttcttttgatttggaTTTCGCGACGCTAAAAACTGAAATTATGTTC AGATATTTCCCTCTaattttcaaattcttattatttaaatggtattcaaa ttctttcaaatattatttttcagaCTGAAACGAGGTTCAGAGACAACTGA AGAAGATATCAAACAATTCTGTAAAGGACAGGTATCCAACAATCTTGATA TCAGATGGTTTGCTTTatcgtttttttattatttcaccGTTTTTTGAATA TTGCCATGTTTNATATCAGatggtttttttattatttcaccGTTTTTTGA ATATTGCCAtgttttataaatgaaaaaaaggaaTTGTTTTGATTACATTT TTAAATCAAGACGAAATAATAATACCCTTACTATGTTATTGATAAGGCAC TGAGAATTTATACAGTACATCTTCTTTATATTCTAGATTTCACATTACAA GATTCCAAGATATATCGAGTTTGTTGATGAATACCCCATGACTGTCACTG GCAAGGTATGGAACTTTGTTatagttttgaaataatcaCCATCTTTCTAG AATTAATGTTGTTTGGCTCATAATAGACTGATGTGAGTTCTCCAATTTTC TATGACTCTAAAATGTTCCAAGCTTCCCTACCTACCTTCTTTGGGATTGA CTGATATTGTTAAAAGGCGGAGAGTAAGGTCTTTTTTTAGGTGAAAATAg aaatttagtaaaatttcaaacttttaaatctaaatttatTCCAGTAGCTG TTGAAAGCAACTGATTctttaggctacgtcatatttttttcagatcAAGA AGAACGAAATTCGTCAacaaatgaaagtgaaaatgggCTTGGAATAATTT TGATGAATTGGTTCTATATAAGGGGAAATCACTTTGGCAGTGTCTTTTTA AGCTTACTTTTGTTCCTTTGATAAAAAAGCAGATATTGAATGAGTAAGGA TCTTTTGTGTTGATTATAGGGGGTTATTATAGGGTATAAAAAACGTTAGA ATATGATTTAGATAttaaagaaatgtaattttgtAATTTAGTAGATATAT AGTATAATTTAGCAAAGAATTTTATTATCCAggttttagttttttatttt ctatgatgaatattttttatcattttttgataatattttcaaggtaataa ttttttgtacacgttttttatagcACAGTCACACGTTATCCCTATATACT TTTTGgggtttaaaatgaaaatacaatatATTATCGCTGAGAACTATTCA AAAttgttcataaaaaactttttggttCAAATGTACTCATCGTCAAGTCA GGGCAAAAAAACATACTGCTGTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00043278TCONS_00043278Clytia hemisphaericatranscript
TCONS_00043279TCONS_00043279Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00043278-proteinTCONS_00043278-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004087supercontigsc0004087:1..7274 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ACSF2acyl-CoA synthetase family member 2, mitochondrial isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.74 11.86 2.31 0.92 3.16 1.85 10.02 10.79 10.87 8.29 9.04 8.3 14.71 12.05 12.68 18.65 11.46 10.23 6.81 6.76 12.83 12.83 17.83 17.6 20.9 20.86 17.17 14.34 26 20.29