XLOC_027847 (gene) - C. hemisphaerica

Overview
NameXLOC_027847
Unique NameXLOC_027847
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005153:86..4031+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027847 ID=XLOC_027847|Name=XLOC_027847|organism=Clytia hemisphaerica|type=gene|length=3946bp|location=Sequence derived from alignment at sc0005153:86..4031+ (Clytia hemisphaerica)
aaaaaatctgctggagtatttagttattcaaaagaccgtcGCATTCTCCC AAACGACTAATCGCTCTAAGTGTGATATAATATATCATTTAGATGTCACT GCTTACGATTGCTCGTTAATAATACATGGCCTCTAAAATCCCTTTTCTAG CTAAATACAACGATAAAGTTTTATATATTACTATTTTGAAATTGGGGGAG TTATGTATTATTACTTCAACCATCTTTTTGCGAAGAACCTTAGTATATTT TAATATGTTCTTGTCTCACAAACATTTGTTTGTTATATATAGTCATTAAA AGTGTTTCCATCTTTTAGGGAGTCGACGTCGACGATTAAACAATGTGTGA TGCTACGGCGGTAAACTTAAAGTTGTTGGAAACTTGGTGTCACCATAGCA ACTGAAAACAATCAGATAATTTGTAAACgaatgaaatcaattttaagcaa aGCGAAAGTTGGACCACGATTGGTTATTCAAGATTCAACTATCAAGAAAG GAATTTTAAATCATTCCCCTATGGAAAATAGAGCTTAATTTCGAAAAGAG TCATCTACTTGACATTGGGTAAACAGCCCCTTGTCTGGGGCACCCAAGGG TCACCCTTTAGTGAAGTTGTGCTTCGAAACATACAATTCTCAACTTTGAT CTTTCAGACTTTTTTACCGTTGTTCTTAATCCAGAGCGCTGGATTTTATT TTTCCGGTTGTTGGTTGGTTGTACTGGATATAGTGTTATCACTGGTTCTT AGTAGTATGAAAACTTGTTCTATCGAATGAAGTATTTTGTTCATTTGATC CAATGGGAATTTTGGGCAAGAAAAGGAGTTATGAAGTTTACGAATTTTGC AAAGAATCCATATTTTGTACGGGGTCCAGCTTCTGCACTTCACCAAGTGA TACAGACAACTTATTGTTAACTTATTTTATATTGGCCGAAACGGCAGCCA GCTCTAACATCCCGACGAACGACATTGGCGGACACTCGCCCGCACCGTCC CTTCCTGCTTCACAATCTGTTTTTGATTGTACACCGAACTGTGCGCTGAT TTGGATAATTCTGGcgtttaaagcttttttttgtTTCCATTGCCATTATT CTCTTAAGTCACAACTTACGGTCTCCCAAATCCTTTGGTGAGAATGGTGA ATGAAATGTTTTGCTCCTATCTCCAGTGGCAAACATTTCGAAAACTATCC TGCATCATTGCACTGGTCTACTAAAATTCATATTCTCATCCAAATTCGTC TTTTTGAATTCATCAAAGTTGCTATATGGTGAGTTGGGTCAGCTTCAACC ATCATATAACTTGAAAGGAAATATTTCTAACAAAATCAAATGTTGACTTC AATCTTATTTCAGTATAATTGTCTTATATTGGTTTTCGGCTTCCAAAGGG CACTTTCTGATTTCACGTTTTGTTTTGATAGACAGCCTTTTTTGCGAATa cttactttaatgggataaatttcgcagattttgcggatttgggtgtcatc cgcgaaatcccaatgaaaaatttggaaaggtcttatccgcgaaatttttt tgaacACTACTCAAATAATGACAGATGATTTCTTTTAAATGTTAACTTGC ATAAAAaagcgctaataatgtgtattttgaCAACTagcaaaatcatgaaa atattgaCTCCTAATaatgccatccgcgaaattaagccccgcgaaaatta atcccattaatATAGCTGGATGTAGCCCCACgaacgaaaattaaaaaaaa gtgacgATTTAAAGGTGTCACAAACAGCACGAAAAGTCCAAAAGTTTGTC GattctcataaaaaagacaTTTTCTACAAAATTGAGTCTGGTCACACTCT TCTGATTTCCCTTCTtatatatgatttttttttacttttaagtgTTATAA ACTCGTCGTTAAAGCAGCAAAAAGTAGTTAAAAAGTTGCTTAAAGGTGAA GTACGCACTCCAGATTGATCCAGAAGTTCCGAAAATTGTGAAGAAACGTC CAAAAATGAACAATTATTTAAACTGACGTTATTTTTGGCCTTCTTCttac cttttcttttcttttcattcaCGAAAGACAGTTCACCACTTCAAATGGGA TCGAGCCGAACGAACAAATGTAACCTCGAAGAAACGTTTGTAGTCTCTTC TTTATGGGTACAGAAAGTAAATCTTCAATCCAGAAGAAAGCTTAACAACA AATACTTTATATATTTACTTCTACTGCTCTCGGTTGACATCGAAACCAAT CCTGGACCATCGCCATGTCAAATTTGTTTCAAGACAGTCCGTCGCAACCA GAAAAGATTCTAATGCACCTCCTGGGTTGATATAACTCACGTTTATTACA CGAAAATCGACCGAAAACTGTTAGTAGTCTAGAGATGAAACTCACTGGGT TTGTCCAACTTGCATCCATACAGAGCTTCCATTTCCCGACATCTCAGACC AAGATTTACTCGACCTTCAACTCGATCGTCCAGTCGAACAACGGAAGTTC ATCCAAACAACGGACCAGATAATCTTCAACCAAAATCGTAAGCATACGTC CATTGCAAATTTGAACACTCAATCTATCATGTCAACCTTCTCACAGTTTG AATGTTATAAGTTTAATATTATCGCTGTTAGTGTTACCGAAACATGGATT ACGAAcacaaaacaagaaaaagtcGTAAAGATAGACAATTATCTTTTCAT ACCGAAAAATCGACTGAACGTAAAGGGAGTTGGAGTAGCTTTTTACATCC GAGAAGAGCTTACCTATAAAAAGGAGACTCGGCATTGAGAGATACAACAT GAAAAGTAAaaggtaaaaataaaaactctaTCACATTTCCAGCACCATCC CGAACGAGCGTAAATGTCATCCCAGCGAAATAAGTGATCACGCTGGATCA CGACCTCACTTATACTATTATGAACATTCGAAAACAAAGGTTCGAGCCAT GGCACAAGATCATCCGAAACGAAAAGAATTTCTCACTTCGAGATTATGTG AGGATTTTTCTCAGCTCCCTTTGAACATTATTTACAGTTTTTATGATCCC GATGCTCAAGTCGATAAACGCTTTAACACGCTAATTACTAACTGCTTATC CAGACACGCTCCAGAGAAACGAGTTAAGCTTACACGTCCCCTGCTCCGTG GATGCAAGATCCTGATATTGTCCGATCTAGAAACTATTTAGAAGACCTTC GAAAAAAGAAAAGTCGCCGAATCAGATGATGGATACCGAAAGGTCAGAAA CAGTCACAAAAATAATGTTATTATCGCTCAGCCGGTCAGCGACTACATCA CATCGCCCCTCGTTCACATCATTAACAACTCAATTAAAACCGGTATCTTC CCGGACAAGTGTCTGCCCTATCCTGAAGGTGAGAAATCCTGCGGTTTCAA AGGACTTTCGACCTGTTTCTATTCTACATTTACTAccaaaggatttaaaa aaaatcattctcaTGCAGATCCTTGATCACATCGAGTCAGGAAGTCATCG AAACCCCGTCAAATTCAAATATCGGAGAATGTTATATCCTTGGAAAGGGA TCTCACGGAACTATCGAGATGGTACACCAATAATGGTCTAATATTCAAGG ACGACGAACTTCAAATGATAGTATTTCACAAACCAAGACCCCTCCCTACT GACCGATCCTACCTTGTTCGATCAAAAAATGGTCACTCTATTAAACAGGA GTTAACGGTAAGTCTTTTGGGGGACATGATCGACCAAAACCTTACATGGA TAGATCAAATTAATCACGTAACAAAATTTGCTCAGTCTTATCTTCAAGTG TTGAAGCAATTTCAACGATTTACACCTTTCAACGTCAGGAAAACGCTGGC AGNNNNgtactagtaatcgtatggtttggagtgcaattaacgattaatca cgagtaacaaaggagaaaatagtaatttgcacgagtccgaaggacg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044201TCONS_00044201Clytia hemisphaericatranscript
TCONS_00044202TCONS_00044202Clytia hemisphaericatranscript
TCONS_00044203TCONS_00044203Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044202-proteinTCONS_00044202-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005153supercontigsc0005153:86..4031 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.82 0.38 0.74 0.63 0.85 0.83 1.84 2.73 1.04 2.84 2.04 1.75 6.39 5.68 0.65 0.89 0.34 0.55 1.21 1.23 0.25 0.33 0.4 0.3 1.15 3.59 0.58 0.84 0.41 0.45