XLOC_027903 (gene) - C. hemisphaerica

Overview
NameXLOC_027903
Unique NameXLOC_027903
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005268:106..4343-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027903 ID=XLOC_027903|Name=XLOC_027903|organism=Clytia hemisphaerica|type=gene|length=4238bp|location=Sequence derived from alignment at sc0005268:106..4343- (Clytia hemisphaerica)
CAGTCAACGGCGATTGGGGCAAATGGGGAGGATTCAATTCTTGTAACAAA
CGATGTGGAGGAGGTCTACAAACGAGATACAGATCATGTAATAACCCAAC
ACCTGCACATGGTGGAAAATCATGTCCTGGTTCTCCCGCTCACTCACAAT
CATGCAACACTCATAAATGTCCAGGTATTGTCTCTGAACATTATTTAAAA
AATCAGAAATTTCTATAAAGGTTCTTTTGAAAAGCCATCTATGAATGTGT
TTGAAAACTTTGATAGACACGCTTGTTTTTTTATAAGAACCAGTAAATTT
TCGCTGAGCCTGAGATTGTTCTTAAATTTATATTGTTCCAAACAATAGAG
CTATTGTTCTGAGGTCCTAAATCCGAGGTTTTTTCTCTTAAAAAATTGTT
CTTATAAATAAAAAAGCGTGTGAACATAGTCTCATACTGCATAAACGTTG
GTCTTATGGTAAAGTAGTGATAGGTATCTTCTTGCCATGTATTTTTCTTT
AAGGCGATAAAAAAGTTCACTCTACCCTTTCTCTTACACAGTCAATGGCA
ATTGGGGATCATGGGGTTCATATGGATCATGTAACAATAAATGTGGTGGA
GGTGTTCAAGAACGATTCCGTTATTGTAATAATCCCGCCCCCGCCCATGG
TGGTAAAGGATGTCCTGGATACGCCAAAATGGTCAGAGCTTGCAATACTC
ATAAATGCCCAGGTGAATATTTTTATCTGTCATGTTATGCCAGTAACTGA
TGAAAATTAGTGTGTTGGGTTTTGTAAATTCTAGTTCCAGGAACTATTGA
AACTGATTTTTCCATCTTCAATCAATAGCACAAGCACTGACCTTTATAAA
CCCTAGACCAAGCTATATTCATCATNATCGATCAAGTTTGATTGTATTGT
GTAGCGCTATTTAAAGATTCATTCCTGAGTCACTTTTGAAGTAGAAAAGG
TTTGATCAATCATATTCCATGAATTACTGTTTTTATGTTTTCAGTAAACG
GTAATTGGGGCAAATGGGGAGGCTTCAATTCTTGCAACAAACGATGTGGA
GGAGGTCTACAAACAAGATACAGATCATGCAATAACCCAACACCTGCTCA
TGGTGGAAAATCATGTCCTGGTTCTCACGCTCACTCGNGATACAGATCAT
GCAATAACCCAACACCTGCTCATGGTGGAAAATCATGTCCTGGTTCTCAC
GCTCACTCGCAATCATGCAACACTCAAAAATGCCCAGGTATTTTTACGCT
TGTTTTTCACTTGTTTTTAAAGGGTTAGTTTAATCGGATGTTTGAAATCT
AGGACCAGTAGATTCCTCGTGCGGTCTAGAGGAAAAATTCCAAATATTCA
ACTTACAGCTTTTTTACTTACTTTTAACGAGATAGACATTTCTTTCTTAT
AAGAAAGTCGTAAATTTTTGAAGCCTTTGGATGTTCTTAGAATGTTCTTA
ACATATTCTTATTTTCACTATTTTTTGAGTAATTTTTTCCATTTTCCTAG
AGGGTTTTAGTGTCCGCAAAGCCTTAAAATATTCTTAACTTATGTTCTTA
ATATTTTGGCCATCGAAGTTTTTTGTTCTTATATAGCTCTTGTGAAAAAA
AATGTGTAAAAAGAGAATTTAAATTTGGTTTCAATTACCGTTTTGTGGAG
ATTTGCAATTTTATATCTTGAAATTAGCTAGGTAAAAAGATATGAAAACT
TTTATTCAGGCCATAGTAGATTATCTTAACCCTATTCAACCTAGGCTTTT
AGGGGCGGTTCAGAACTAGGGGGGGGGGCTTTTCCTGTACCACCCCTTAA
CTTTTGATCTAGTGGGTCTTTTTAGATGAAATTTGGCACACAAGATCCTT
GTCACGTAAGGTAACTTTTGACAAAAAAATTTTTTGATGACGTCACTCAT
CATGCCCAAAGTGAGCAAAAACCTGAAATTTCCTTTGTTCTTATAAATAA
CTATTGTATTCTAACAAAAGCTTTAGAAAAAATTTGCCTGAGTTTAAAAT
GCTTATTTTATCCTAAATATTCAATAAATTACGGTTTAAACGATATATTT
GACATTAAAAATAAATTTGTATTGGAAAAGTGTCAATTTTTGTGACACCT
TACTGTCAGAAATGTCATCATGCTCAAGGTGTGAAAATCTATAGGTGTCA
AATTTTTTCTTATTTTGAAGCTAAATAAAAGTTAGGAATTTACAGAAAAT
TTCAAGGCAAAAGCTCTATTATTTCAGGACCTATTACCAATAGATTGACC
TCCGAACAGAAAGAGCCCCCCCCCCCTAGTACGAATAGGGTTATTACACG
AAAAACAGTCAATTCATGGGCCACAATTGGGGAACATCTGTATGGGAATG
AACCGTAAATTTGAAGCTTTTTTCTAATTTTTTGTAAAATTTGGAAATTA
CTTAAGAATACTCAACCCTCAGCCAAAGTTTATTATTCTTATAAAAAAAG
TGTGTCGGTAAATTCTGCGAATTTTGAAACTTCTAAAAGGGACTCATTTT
ACCTAATTTGACCAATTTTCGATATTTCAAGAAGCAAAAAAGTCAAAATT
TTCTCATTTGTACAACCCTTGTTGGGCTGAGATATTTAATTTNAAAGTGT
GTCGGTAAATTCTGCGAATTTTGAAACTTCTAAAAGGGACTCATTTTACC
TAATTTGACCAATTTTCGATCTTTCAAGAAGCAAAAAAGTCAATATTTTC
TTATTTGTACAACCCTTGTTGGGCTGAAATATTTAATCTACTGATTTTTC
AAGCCCTTACAGGGGTTACAAGGTAAAAAAGAATTCTTTTGGGCGGCACA
TACCCAATTCTCTCAAAAGTTTTAAACTGGGATCAAAAGACTGTTGGGAC
GAGACTAGCCGGTACCAAACCCCCGCAGCGGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTATTTCTGTATTGGATGTGTTACTTTGTTCGAGTGTTACAAAGTTTGGA
ATCTTGAAGTAAGCTGTGAGTAGAAGCGAAAAGTTGATGGGGTCAGGTTG
AGTCTAATTATGTCCAACTTTAAGCTTCTTACTGATTGACTAATGATTCA
CTAATGACTTTATCAGTATTGAAAGGCCCTTGAGAACTACTTTTTCCTAA
ATACATGAAATCTAGTTACGACATTGCTTCAAGTTCTTTAGATGAATTAC
TTTGAAATTTTGATAGTAATTTTTGATAATTGTTCTTTCCTTATCTACAA
TTTATACTTTTTAGTTAATGGAAAGTGGGGATCATGGGGCTCATATGGAT
CATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACGATTCCGTTATTGT
AATAATCCCGCCCCCGCCCATGGTGGTAGTGGTTGCCCTGGATACGCCAA
AATGGTCAGAGCTTGCAATACACACAAGTGCCCAGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044267TCONS_00044267Clytia hemisphaericatranscript
TCONS_00044266TCONS_00044266Clytia hemisphaericatranscript
TCONS_00044265TCONS_00044265Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044266-proteinTCONS_00044266-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005268supercontigsc0005268:106..4343 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67	0.42	0.29	0.28	0.57	2.62	1.92	1.42	1.27	0.44	1.72	0.81	26.6	27.47	0.84	1.71	6.06	6.67	138.9	150.73	30.54	50.3	16.35	25.05	59.33	59.56	0.82	0.94	0.4	0