XLOC_028173 (gene) - C. hemisphaerica

Overview
NameXLOC_028173
Unique NameXLOC_028173
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0005765:1..2194+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_028173 ID=XLOC_028173|Name=XLOC_028173|organism=Clytia hemisphaerica|type=gene|length=2194bp|location=Sequence derived from alignment at sc0005765:1..2194+ (Clytia hemisphaerica)
TACTGGTGTAATGACGACTACTTGTTCAAATCGAATAATAGTGTGGAGAA
CGGCAGAACAACCAGATCAATATTTGATCGAACATTTAGTTAATTCAACG
TCAGAAAAATGTCACAATGAATTGGTGTGTCATATTAAGGAAAATCAGGG
TGATGCTTCATTGAAAGGGAATTCCCTGAGTGAAGGTAGTTCTCGCCGAA
AGAAAATTTCCCTGAAAAATAAAGGAGATTCCTTGAGCAGAAATAAGAAA
CAAGATTCCCTGAGAATTAGACCTGAAGGTGATTCCCTGCTTGAAGAAAA
TGCTGATGTAAAAGAACCCTGCAAATGCAAGACATCAAATGAGACGTTTT
ATGCAAGAGAGATTGGTTGCAAGTATGGCTTTGATCAAGGTACTTCAGAG
GAACTCTTAACTTTATCTACATAATTAGAAATTAGATATTCTTTTCCACG
ACATACTGTCAGATAGGTGAAGAAACAGGTGTCAAAGACCTCACGCTCGA
CTTTTCTAATCAATTACTGAAACTAAACGAGCTAAACAAACTAGCACGGA
TGATATAAAACCATTATTTGAGAATGGGTACTTTCTCTACAATTCAAGCT
TTGACCGGGATGTTTGGTCATTtccaaccacaaccacaacCACATAATTT
GCTGTTTTCATTCAGCCAGCCAAAGCAAAGAATATTTTAAAGTCTGTTTC
AAGAGTGGACACTTTACCTCAATTACACCACATCTTGACATCTATTACTC
ATTCACAGTTATTATAGGCGATGAAAAGGCGAAGAAGAAGAAACTTATAG
TGGTGCATATAGTTTACAAGGAGAAACTGTTAGAAATAGTAAAGTTTCCA
CATTTCCACTTTTAAGACAGACTTTGCTAACAAATATGAACCTTAAATCA
AGTTAGAACTTAATCGATATCTCGAATTCTTTAATTATTTTCATATCGAT
TTTGTATTTCAGCCTGTCCTTTCTGCTTCTCCACAAGCCCAACACAACCC
ATCATGCTCAATTTGATGCAGAATACCAAAAACTTACCAGTAGGGCGGTT
GATGAGGTGCAAAGGCGGTGCACCCATCCCACCTGTACGAATACTTACAG
AAAAAGGTATATAAACAATTATCAACTCTTACACCAAAATTACGCTTTGG
GTTCAAGCTAACCAGAGTCCAATCATTAATATTTGAACCCTCATCGGGCC
CTCATGTTATATCCACCAACTTTAATAggtgtttttgaaaatggtaccct
aatggtagacTTATCAGGTTTacatcaaatttattttttaacatgaACTA
TATGCTTTCATTAGACACCCCTGCATCAGTACAACCATCAGTACAATCGG
GATATTTGAgaaaagaagttttattttgaagGATCCCAGCTAAGATTGGG
TCGTTTGaaggacaatttttttctaattcatatATAACCATATTTCCCCT
TTAATTCTCAATTTTTCCAGAACTAGATGAGTCGACGGAAggtgaatctg
aaaattgcaaaGTCAGCGAAATTGAATACGAAAATATCGACGTTAACGAA
TATTCAAAATGGCGTGTGCTAAATACGATTAAATCAAAGTTCAAATTTGA
TATTCAAGGTAATATTCTGAAGGtaggttcaattggttcagagttgaaaa
tttaGCACTATCCATTTATCTTTTTCTAATTATTAACGCGAATATtaaga
aaatgctaaaatattttcaatcgaTCTTTTCACGCGTAGCTTCCAAAATA
ATTACTTATAGACCTTTTCAAACAatacgtcacgagcaacgctCACCTCG
TTTTCAactattgctatggtaattgagTTTATAAGAAGTTTACTCTATTA
TTAACAAAGGCAAATTTGAAAACTCGATGGATtcaatcaccttggtaatg
gtttcgaaacgaggcagtcgttgcactTGGAAGCATATCTAGGCTAAGAT
ATgggaaaattaagcatatggcaagcattacttgagcctattcgtaattt
ataaaaactaCGGTGCCCTGAGTGTTTAGTCATCAAGGTACAAAAATTAC
TTTCCAATTTCTATTTCTTTAGTGGACTGGAAACACGTGTGAGCTGCAAT
CTTTGAGCGGCCTCGTTTTGAAGATAAAGATAAAGTGTGCCAACGAAATG
GAGCCTATTTGTATCATCATTAAAACAGAAGGAAAAAGTACAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00044552TCONS_00044552Clytia hemisphaericatranscript
TCONS_00044553TCONS_00044553Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00044552-proteinTCONS_00044552-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005765supercontigsc0005765:1..2194 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2	0	0	0	0.43	0.61	2.71	3.53	2.04	1.86	0.78	1.06	4.67	3.61	4.31	4.1	2.92	2.7	4.61	3.69	3.27	1.9	2.05	2.13	2.19	2.45	0.44	0.1	3.4	3.68