XLOC_029868 (gene) - C. hemisphaerica

Overview
NameXLOC_029868
Unique NameXLOC_029868
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_117:469672..473978-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_029868 ID=XLOC_029868|Name=XLOC_029868|organism=Clytia hemisphaerica|type=gene|length=4307bp|location=Sequence derived from alignment at scaffold_117:469672..473978- (Clytia hemisphaerica)
CATGTGGACATTACTTTAATTATAATAGCCCAGATTTTAGATATTTCATC AAACAAAGTTTAGAAGTTTCATAAATCAATTCATTTTGATTCATCTTAAA GACACGTTACTACTACGATGGCTTGCTTCAAATTAATTCTAATTTTCTTT GCAACAATAATCAGTCTAAATGGTAGGTATCAATTTTATCTTTGTCATCT TTAATTTGGTTGAAAAGCTTGCCTTTTTGATAAAAATATTTTTTTCGTAT TTTTTCAGTTCTATGAAATTATCATAGGAAATTATTATTCCTCTAAATTA AGAAACTGTCTTGGTGTTTCCTTGGGAATAACAAATGGGTATACTTGAAA CTGACTTTGTAATGCTTAAGGTAGTTCAAATAATTTTATTCAACATATAA CATAACAGCTTAGTAAAAATAATGAAAATATTTCTCAGTATATTCAGTGG TCCATTACAGGTAGCGCGTAGAGAAAATTCATGAGAAACCCTGGGGGATA CTGACCCTGATAGGCGACGTACTGGAGTTTTCCACCTTATTTTTTACGTC CCGCGTATGCGGATCTTGCCAAAGGATGCTACACTCCCTAAATGGACCTG ACGGTTAAAAAATCTGGTATTTTTACATCCCTTTCTCACAGACCTTTGGG GTAAAAATCATGGACTGACTCAATGGGGATTGATATTTCCATATTTTTTA TGGCTGAAGATTTGAATTCTATATTGTTTGCAAGTCAGAAAAGTCAATGG AGATGGGAAAAAAAGCATAATATTTTGCAGTGAGGATTGGTTTACTTGCG TATTTTCAGTGGGGACAAAAATTGGAGTATGATTTTCCACTGTGGACGAT TTTTGGCCAATTTTTCCAGTGGGAAGGGGTCTGTGAGAAGAGGGTGTCTT ACTGAAACCCCTTTTAGTTAGATTTTTAGAAAATTTTCTTTTTTGAATGA AAATTGTTATCATCTTTAATTTTTCAGGATCAATCGCAGGACCATTGAAT TCCGATAAAGGATCATACATTCCAAAAGAGATTGAGAATGACAATGAAAT CGAATACGATTCGCGTAAGACCTTTTAAATAGTAAGAGGAGGAAGATGGC AAAATAGACTGACCTTTAACTTTGTCTAAAATACTAGGACTGAATATACC TTAAATGGGGAAAAGTTAGTAAAGGAAAGATGAAGAAGTTTTCCCGGAGT AAAAAAAACCTTTCTGGTCAATTTCAAGCGAGTCGTGACAATGATTTTTA CAAAAGTGACAACATGTTTTCTCTGACTTATATTCTCCCTGAAGAATAGT TTTCCCCAATAGAGTTATTCTCTTTAAGGTGATTTTTCCAATTTCTTTTT CGTCCCACAATGATTAAACCCCTAACTATCTGAAAACAATTTTCATTGGG TCAATAAGACAGAGATCTGCCAAAGAGGAAAAAATATTTATTTTTGAACA AATGGACTAATGTAAGGCTTAGAAAAATCAAAAAATCTTAAAAATAAAAT CTCAGTCCCACGAAAGGTTGGACACCCTAGTACCCTGACGGGCAATATTT AGAGCCATTGTCAGGATGCAAAATTTCTTTGGTAACTCAGGTTTTCCATT TTTTCATAGTAATGATGCTTGGATCATCAGGTGGCAAATTCAATGGAAAG AAACGATCTTATTTCTATGGCGATGAAGATGAAGACGAAAGAGAACTATC CGATCCTAGACCTCGTAAGTAATTCTATTTTTAGAGAAAGCAAAGGTAAG TTTAGAACCATTTGTGAATCTTTAGGGGACCTGATCAGCCTGCAGGAACA ACTTTCAGTCAAATCGAATGACCCGATGAGTCTATGCACGATCTTAGTCA GGTTTACATCTTGGTCTGTAAAATACCAACCAGACAAGTGGCTAAACTAA AAATTAGCAAATCATCTTTGATTATCCATATCTACCACAAGTCAAAATTT TTAGGTCATAGCACTTATCAATTTTGTCTTCAGGACTCATTATAAAGCGC TATATCGCTTCAAAAATTCACTTCCAGCTCTACGTAGTGACAATTGAGTC CTCGGGTTCTACATGACCTCGTAGCTCAATTGGTAGAGTAAATGCCCGCG AATGGTATGGTTGTGAGTTCGAGTCTTACCGGATTCGTTTATTTCCAACG GCTCTGGTGACTGGTCAGAAGACAACATGAGAGCAACTGTATTCACTTCA CTTTATAACAAAGGGCACAATGTATGAACAAGACTTCTGCTATGCGAGCC AAACCCCACCATCTTGAAGCAACAACGCCCCTTTCTGGAAAATGGGCACA ATATAACACTAATCTCTTTCCCCTTTTTTCATAGTAATGATGCTTGGAGC ATCAGGTGGCAAATTCAATGGAAAGAAACGATCTTATTTCTATGGCGACG AAGATGAAGATGAAAGAGAACTATCCGATCCTAGACCTCGTAAGTAATTC TAATGAAAATCCTTTTTTAAGTGCAAACGGAAATCTCTTAAGGAAGGGGC AAATGCATTCAATACTTGATCCAACATATCAAATTTTTGGTTGGACGAAA TGTTGGATGAAAGTCATGTGGATAAATTCGAAAAGTCATTTACCCAAAAA CGTCAAACATTTTCATCCAACATGATTACGCAAAAAGCTACGTCTGTAAG CTATGTAAATATTCGATTTTACTACGTATACATCTTTGTGAAAATGAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCAT CCAACATTGAAGCCAACATGTTTTAAGTGACGTCAAATCTCATATGAGAT GTTGGATGAAAATGTCCGAAGTATTCCTCTTGACTACTACCCTGAGTATC AGAGGTTAAGTTTTCAAAGAATATATTAACCTCTGGAGACCAATAATAGA AATTTTATCACGCATGTGTCAATCTAATCACTTTAGAAAAAATCAAAGAT GAAGAGAAAATTATTACCTTATTAATGTCTAGCAGACTGTATCAGTATGC AGTTTACTATTTACGAATTTCCCGCAGAAACCTCCAAGTTTAATAGACGA TCTCGGATTTAGATAAATGCAATGCATTCTGGTTTCTAGGGACTCTCAAA GGAATTATAATAGATCAATTATAATAGATTATAATTCCTTTGAGAGTCCC TAGAAACCAGAATGCATTTCATTTATCTAAATCCGATATCGTCTATTGAA TTGAGTTTCTTTCGAAAGAAATCTTTTACATGATCCCCAAATGTATAGCA GTACTAAACTATTAATTATTAGGGAGGTTAAGTATCAAAGATAAATCTAC GCGACGAACGGGCCTTTTCTCTGCAAGATGGTAAGGGTAGCAAAGTAGAT GTTACATCTTCTTTGTTCAACAACGAAGATGTTCACGGTTTTTCGTTCTT GAGCTGTTTTAGCCTGGATTCTAGAAAATGCAGGTCCACATGTTTACTGC AGGTTGCGGGTCAAAACCCGTTCGTTCGTCGCGTTGATTTATCTTTGATA CTTAACCTCCCTATTGAAATTGTCACTGAATCGAAATAATAGACTGACTT TATGTTATGATTCTCTATCACTTACTCTTTTTAAAAAGCATTGAAGATAT TTTTTAGTTGTGTTTTCAACGACGGGAATAAAAATATCAACTTTGAACTT CATCCAAGATCTTGGATTGTCGTCATGGTTACTTTTCTCTGCGTTGATTG CGCGCTGAATAGAATCTCGATTGGTTGGCACAGCGTCGATATATGATTTC GACCTGTGCTTTTGATGGTACTAGACTACCTATGTTGCAATAACAATCAG ACTATCTTTTGAACTTTTTATATATCTTAGCCTAGAGTCTTTTGCCGACT TAAAACATTGTATTTCTTATTTTTCAGTTCTTGTATGGGGAGCTTCAACG TCACCTTACGCTGGTAAAAGATAACCTTATATGAAAAATACGAATTCGCA TTGTCAGCACATTCATGATATTTATGACGTAATGTTTTATATGGAAGTAC CCGAAAAAGACTGGATGTTTTCCACTTGTGGCAAGCACCCTGACTATTTT GCGTGCTTCCGTAAAAATTATTATGTCATGAATATTATGAATTGTATGTC TAACAAGATGAGGGTGCCGCATTCAAAGTGTTTATACTTTTTAAATATCA AAAATGATTTCGAAAATATTTGAAATATCTTGAAATATCTTGAATCTTAC TTGGAACAAAAATCTTTTTAAATACCTTGGTAAGTCTGAAAGGGATAATT TATGACTTTTACTTTAGTCATTATCCTTATAAAATGAAGATTATTCTTCA TAAATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00046814TCONS_00046814Clytia hemisphaericatranscript
TCONS_00046813TCONS_00046813Clytia hemisphaericatranscript
TCONS_00046812TCONS_00046812Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00046812-proteinTCONS_00046812-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_117supercontigscaffold_117:469672..473978 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.18 0.21 0.13 0.25 0 0.47 0.31 9.19 2.85 7.03 13.39 4.16 2.43 3.91 3.48 0.23 0.34 2 2.97 0.59 0.51 0.7 0.76 0.07 0.1 0.42 0.62 0.74 0.21