XLOC_031256 (gene) - C. hemisphaerica

Overview
NameXLOC_031256
Unique NameXLOC_031256
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_154:366534..370451+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031256 ID=XLOC_031256|Name=XLOC_031256|organism=Clytia hemisphaerica|type=gene|length=3918bp|location=Sequence derived from alignment at scaffold_154:366534..370451+ (Clytia hemisphaerica)
cgtaaaacaaaaaatttaacaatGCTATGTATAAAATAAAAGTACAAAAT
AATTTGAGAGGGatactaaaaaaaaaacttttaaatatacaggcccttat
tttataagaacaatttatacgaaaacgaggctgaaaattggccaaaacct
aaaaacTAATTTAAAGAAATCTGAccctcaaatttcaaaaattattgatt
ttatCAGACTTTAAACctattttaagttttcaagtaaagaaactaagcgt
attaagaacattgtaagaataATAAAATCCAGGCCTAAAGATTAAGAACA
ACTCAGCTCAGGCCAATATTTACTGGTACTTatgaaaaaaagcgtgtatt
cattTTTTTGGTATAGTTCTGGTTCAGACCTaagctacgtcatatcttcc
tttgtttcgagtgtaaaactcctactcCTACAAGAGTAAGACCTAAAAGC
CTGGAGTTGTATATTGTGTAGACTAGTTCAGACCCTCAAGCTCTGTATAA
TGTTCGAAAAATAATGACTTTGAAAAAACGAAGGGTAGAAAGATTTTGAA
CAAGTTTTCGTAGAGAAGGATGACACCAATAGAATGAAAAAGTTTTACAT
CTACAATGTGGCAATTTCTTGAAGAATCCCTCCCCCCTAATATCAGTGTT
GATgtgagctttttctgagcttGGTGGCAGTCTTTCAACCAATCGACATT
GATACTAGGGGGGGGGAATTCTTGCCACAATACTTAGTCACAGGtagcaa
aattttagaaaaagaaaaaacaaataaaacttGTTGAAAATATAATATGA
AAAAGGGGGAtgttataaaaacaattttattttacaatACAATGGTAATA
TTAACAGTTATAAAGAAATAGGGAGTGTCTGTCAGTGACAAATATTCCCT
GGTTATAAATAGAAGTGAATTGTGGAGCAAGATACCGGAAAATTTTCATG
ATGTCTCTTTTtgattgtattgtattgtatttttcGACCAATGCGAAAGG
ACAATCATCAACACAGTCgagtctccgtaactcgaacacGAAGGGGTGGG
GTTGGTTAGTGATCGGTTTATAGAGTGTTCAAGAGAAGATTTGAGCTATT
GGAGTTCGAGCTAAGGAGAGTTGACtgtgaaaattcaatatttgtCGACG
TCGCAGCATTCGAAAAGCAACGCCANCATGCCTAAATCAATCGCTTTCCA
AATTTAATGGCAAAAGGACATTTGAATTGAAAGTAACGTCAAAACATCTA
TGGGGCTTCCATATCTGTCAAATGTCATTCCTATTGTTCAAACTTATGGA
GAAtctcaaacaaaaataaataaattttattattaGATTCTATATTTGAG
CTGTTTTTTGACAATGCCAGAGCTCGCCTTGAGACTGTTCAGTATTTAAT
AAAATCATTGGTCATGAAAatttactttataaaaatgtaCATCTTACGAA
CAGGGGTACTCCATTGACTCCATTTAAGATTAAAGCAGTCCtctcatttt
catttgtaatgaaaaaattcattggaaagataattttgagtgaATGTATc
gttgaaatttcgaaaataaagacgaaaaaagagaaaaatttaaaggcttt
ctgaaattttcaatgtagtgaaaaatttgaacttctctaattttaaattt
tttaaagcttttaaatGGTATGATCTTTTGTTATGGGCTTTTTTCAGATC
AAGAATCACATAATCACATGTTTTAAATTACAAAAGATAGgcaaaatgaa
gttttttttaatacctCAAAATATCGACTCAATACcttaaaatttatatt
ttttttgaaaaatattttatcattaaaagaaacttttttataatttattt
acaatttttataaaaataagacaaacccgtaaaacaaaaaatttaacaat
GCTATGTATAAAATAAAAGTACAAAATAATTTGAGAGGGatactaaaaaa
aaaacttttaaatatacaggcccttattttataagaacaatttatacgaa
aacgaggctgaaaattggccaaaacctaaaaacTAATTTAAAGAAATCTG
AccctcaaatttcaaaaattattgattttatCAGACTTTAAACctatttt
aagttttcaagtaaagaaactaagcgtattaagaacattgtaagaataAT
AAAATCCAGGCCTAAAGATTAAGAACAACTCAGCTCAGGCCAATATTTAC
TGGTACTTatgaaaaaaagcgtgtattcattTTTTTGGTATAGTTCTGGT
TCAGACCTaagctacgtcatatcttcctttgtttcgagtgtaaaactcct
actcCTACAAGAGTAAGACCTAAAAGCCTGGAGTTGTATATTGTGTAGAC
TAGTTCAGACCCTCAAGCTCTGTATAATGTTCGAAAAATAATGACTTTGA
AAAAACGAAGGGTAGAAAGATTTTGAACAAGTTTTCGTAGAGAAGGATGA
CACCAATAGAATGAAAAAGTTTTACATCTACAATGTGGCAATTTCTTGAA
GAATCCCTCCCCCCTAATATCAGTGTTGATgtgagctttttctgagcttG
GTGGCAGTCTTTCAACCAATCGACATTGATACTAGGGGGGGGGAATTCTT
GCCACAATACTTAGTCACAGGtagcaaaattttagaaaaagaaaaaacaa
ataaaacttGTTGAAAATATAATATGAAAAAGGGGGAtgttataaaaaca
attttattttacaatACAATGGTAATATTAACAGTTATAAAGAAATAGGG
AGTGTCTGTCAGTGACAAATATTCCCTGGTTATAAATAGAAGTGAATTGT
GGAGCAAGATACCGGAAAATTTTCATGATGTCTCTTTTtgattgtattgt
attgtatttttcGACCAATGCGAAAGGACAATCATCAACACAGTCgagtc
tccgtaactcgaacacGAAGGGGTGGGGTTGGTTAGTGATCGGTTTATAG
AGTGTTCAAGAGAAGATTTGAGCTATTGGAGTTCGAGCTAAGGAGAGTTG
ACtgtgaaaattcaatatttgtCGACGTCGCAGCATTCGAAAAGCAACGC
CAATCATTGTCATAATGTTGAAACAACATCATGTTGCAACTGCCATTATT
AATGAGTTCTGGTTTGAAATTTCCCCTCCTCGTGTATTTTGGGTAGGATT
ATTAATCGTGGTTTCAGTTAGAACCAACTGTTTTTATCTCTCTGTTTAAT
TTTGCATGTGGCATGTATTTCTTTCATAATTGCCTTTTGAAAATATGTTA
CCGATTGGGAATCGATTTTCTCTTCATGAATCTTACCAAAGCTATCCACA
AACTACCACATGGATACATTTTGCATTTTCAGAACACAACATGATTGTTG
AATTTCACAGGCTAAAataaatgattatttttaactATGCTTTCGCCTCT
TGCTAGCCCGTAAATCTTTTTCATCTGGATAACGTAAATTCACTTTCGTT
ACCATTCGGATCCATTTTATATGTTTATCAATTTTAGTAAACATGTCATA
ACTGGTCATATGTTTTTTACATGTATTCAAATCTTTATGTCCCCAACTCA
AAATACCACCCAAATACCATTTCCTCTTATTAGGGTCAAAAGTTACTAGG
GCACTTCCGGCAAGAATTTTACACCGATCATTCGTACCGACGGTAGCTTC
CGTACACATAAGTTCAGTAGGGACTATATGTTTTCGTCCGTTTGATGATC
CCCAGACGTCGCGTTGTATATTACTGTGCGTTGCTTGAACGTATTTTTGA
CACGTAGCTTGATCGACGACTTTGACGCAACGGTCGGTTAAATGACGGTC
ACCGTTACTATACCAACCAATCGTGGCGACGTTTGTGACGTTATTAAATA
TATGACGATATCTGAAAAGAACAGAGATATAATTGCTATAAAACTGTAAG
CTTTCTGTAAGCCTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049222TCONS_00049222Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_154supercontigscaffold_154:366534..370451 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.19	0	0	0	0	0	0	0.39