XLOC_033599 (gene) - C. hemisphaerica

Overview
NameXLOC_033599
Unique NameXLOC_033599
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_227:101072..109099-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033599 ID=XLOC_033599|Name=XLOC_033599|organism=Clytia hemisphaerica|type=gene|length=8028bp|location=Sequence derived from alignment at scaffold_227:101072..109099- (Clytia hemisphaerica)
GGATATTTCAATATTGCATTATTTTTCATACAGGGATGGTACTTCAAATT CCAAACAGACACCTGGTGCTTCAAATTTAATTTCTAAGCTGAATTCATCG AATCCTGATGCGAGGTGAATAATATTATAATAATTGAGTCCAAATTTAAT TCATAANGAGATGCAATCTCTTGTATTCTTGAAAAACAGGACATTTTATC AACTTTCACAACAAACTTATCTCAATTTTGGCCGTATATTTACACAAATT CTAACAAGGATGCAATATTTTTGGATAAATCTGACCATGCTAGGTATATT TGAAAAATTAAATACTTGCAACATCGAATAAGTTTGAACTCACTTTTTTA TGATGGTTGTCCGAGTAGATGCANTTTATTAACGTGAACTGAAAAATTTC GTGTTAATTTTTTGCGTGTTAATTTCAAGGCCGTTGAATAGTTGCCTAGT AATATTCGTGTAATAAAAAATAAAAAATTTAAACCCGGAGCGGAATTTAC TGATTAATGATTGAATTTCCCTTGGTATTTTAAAATGCATTTTAAACGTG GAAAACCTTTGCTTGTGAATTTGGACATTTTTTTACGTGCGTTCAAAACG TGATAATTTTTGCTGTTAATTTGGTCGTATTTTCTTCTACGTGGATTTTG AATGTGAAAAACCTTTGGTTGTGAATTTGTACATTTTCTTCCACATGCGT GTAAAACGTGGAAAACTTTTGGTTGTGAATTTGGACATTTTCTTCCACAT GCGTTTAAAACATGGAAATTTTTGCTCTGAATTTTGACATTTTATTCCAC ATGCGTTTAAAACGTGGAAATTTTTGCTCTGAATTTGGACATTTTCTTCC ATGTGCGTTTAAAATGTGGAAAACTTTAACTTTGTCGTAAACTTGACATT TTCTTCCACATGCATTTAAAAAAATGTAGAAAAGTTTTCCAGTCAGGCAA ACAAAAAGATGTGTGTTCGGAATGTGGGTGAAGAAAAAAAGCTTTCATGC AGGNTGCATTTAAAAAAATGTAAAAAGTTTTCCAGTCAGGCAAACAAAAA GATGTGTGTTTTCGGAATGTGGGTGAAGAAAAAAAGCTTTCATGCAGCCG GCCAGCAAAAAAAATTTATTTGCTTTTTTTGATAACTTAAGTAATAAGAT CATTGAAATAGAACTTTAAAGATAACTTTATATACAAACAATATTCGCAG TATGAAGTAAGCCCTGATATGTATCAACTACTAACAAACAAATCTTGATT TACAAGGGGGAATATCTATAACCAAACTACTTTAATAGCTGGAATGCTCC AACTTGAGTTTTTATATGATGAACTATATAGATAGGGTGGGGCGTCAAAT GTCAAAGTCAGAAAATTCAAGATGTAGTGTTTTTTTATGAAAATTTAACC TATTGTGAGGCATTCTGCGCAATTTTTAAGGTCAGNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGATTGTCTCTTC AAGTTCGCCTTCTCGAATTACAACTGTTGTAATTTTAAAGAAAACTTTCA ATAATCACAGGAAAAAATAATACAAAGTTCACCATGGACGTTTTGGTGAA TTCACGGTCAAAAGCTACAATGAAATTGCAAACTGCAGTTTTTCACCATG AATTAATCAATGAATTCAGTGAACTTTTTAGATTTTATCCTGTGAATGGG GGGAGGGAATCTTGTAAGGATTATGATAATGAAAATTAATATATTTTGAT TAGTTTAAGTACTTATATCCATTTTAAGCATAATTTTTCTTTCAACATTA ACTGCAAAAAATTAACTTATTTAATTTGTTGAAAATTGCTCTTATATACT TATTTTTCACTTTATTAAATAATAACGGAAAGATTAATATTTGTGTTCCT GTCATCAAGTTAGACCCATTTTTCATACAACTCAAGTTTAAATTTTAGCA TTTTTTCACTTTAAAAATGTATCTCAATTTCCGTTTTTTTTTCTTCAGCT ATGGATTCGCATACAACTCAAGTTTAAATTTTAGCATTTTTTCACTTTAA AAATGTATCTTAATTTCCGTTTTTTTTCTTCAGCTATGGATTCGCATCTT GAAGAATTCTGCTGTGTTGCTTTTGTGGAAAATGGCTCAAAAAAGATGGG AACAGTTCTATCGAAGTGGATTTTAAATGGAATTTTGTATTGGCCAAAAA CAAATTTCCATCTGCTAATGAAACAACGTGCTCCACCAAAAGAAACGTGG TATCAAATTGCAGATCACTCTATCTTGTATACTGGTAATTATCTTTAATC AAGTCATTTTATAACCGTTTAGTTGCTCTAATTAAAAAAAGACACTTAAA AATCTTTGTCTTACAATAATGGAATCTTTCATTCATTTTAACTTCTCGTC CTAAATTTCCAGTTTTTTTGTTTTAAGGGAGTTATGAAAGCTGTATCGCC ATCGACAGCTCAACTGAAACTGAAGGTGAAGTTGGAGACGAGTTGCAAGC TGGCAAAGTGAACGACGTGAGCTTTTCCAGTGAGGAGTCCGATGCAGAGT CCGATTTGGGTGGAGATTATCTCAATGGCACTGGTGGAAACGTTCCTTTG TTTCCTCAAAAGTACGCATCGCCAAAAGATGGACTCTCGATCAAACCGTA TGTATTAATATCATATGTTTAAGTGTTACAATTGGAGAGTTATAATCATC GAAGAGCACTTCATTTTAATCCTTCTTGAATGAAATTTGAATTTGGTCTG TTTCTTTTTTTACATTAAAATCCAAACTTCGAATCTTCAAATATTATTTT AATATAAAATTCATTCTTCTAAGTATAAATTTGACCAGGGATATTTCAAT ATTGCATTATTTTTCATACAGGGATGGTACTTCAAATTCCAAACAGACAC CTGGTGCTTCAAATTTAATTTCTAAGCTGAATTCATCGAATCCTGATGCG AGGTGAATAATATTATAATAATTGAGTCCAAATTTAATTCATAATACCTT ATTACACAAATATTACTAGTCATTTTATTAACGCGAACTGAAAAATTTCG TGTTAATTTTTTGCGTGTTAATTTCAAGGCCGTTGAATAGTTGCCTAGTA ATATTCGTGTAATAAGGTAGTAATAGTAGAAATAAAATTATGAAAATATT TTAAAAGTATATAGATTTCAGTACAATTCTAACAATTGTATTATTGGTGT TCTTGGTAATTAGATATTGGTATCAAGGCTGTACACATCCCCTAAAAAGA TTTTAGATATAATTTTTTGGCCTATATCGTAGGCTTTAGTAGATTTATAA AATAATTTTGTTAAATTTACGTTTGTTTTAGGCATCAACAAAAGTCGATT CAACTTTCATCTCCGAACTCATTGAACGAATCTTCACCGGTTTTGTAAGT TGACTAAACTATTTCGTCGTAATGTCAGGGCTCTGTCCATACACACTTTT TTAATAAGAATAGTGTACTTTGGCTGATGTTGTGCATTAATCTTCTTTTT CTATTGTTCTAAACAGTAGTACTTTTCCTACATTTTTTACCCACTATAGT CGGAGCCCTTAATACTTTTGAATTTTGAACTCATTTAATTTGGACTGCAG TTGTGATTTAGTGATGATAAAAAAGTGATACCCTTTGATACCATTTGATA CCCATTTTGACGTTTATGATGACTTCGAACCTCCATATATCGATAAGATA TCAGGAATAAAAAAGTGATGGTTTAATATTTAAGACAGAGTACACCCTTT TTAAGATGAAAAAACAAATTATACCGTGTGTATTTTTGGATACAAATCTT TATACTTATACTAAATCTTTTCAGACCGAACTATCTTGGTGGAACTCCTA AAGCCGTCAAAAGATCCGCATCAAGGTAATTTCTGAATAAATAGTCATTG AGGTACTCCAAAAGCATAGGGAATTTATGATTCACATTTTGTCTTTTTTA ACAGAAGCAATGTTTTAGCACTTAAAGGTCATAACTTTTGATGTAGTTAA CCAAATTTGATAAATTACCCCTCAAAATATATTCCAATAGATCAATTTAT TATTTGGTTCTTCAGGGTATTCCTTCAATAGTATTCGTTTTATTTATTAG AAGACAAGAAGAAGAGGAGAGCTTGGAACTTATTGATGCGGCGAAGATTA TGGGTCAGTTTATGTTAGTTTTGTGTACTCCTAGCGAAGTCCTGATATAC AGTTTTCTTTGTAAAGCTAATGTGATATTATAGGAGTCAGAAATTTTGAT TTTAGTAATAAACTAAATTTTAAGACATCTCTGTCAGGAAATTAAGCATT AAANGATTTTAGTTATAAACTAAATTTTAAGACATCTCTGTCAGGAAATT AAGCATTAAAAACGTTTGTCAGGGACCGATGGTTTAGTCTTGAAAATGCT CTTTCTGTAAACAGTTTTTATGAAATGTGTTGACTTTTATAAGAACATTC ACGAGCCTTAAATTTGGCAAAGAAACTAAGAACAAGCTCAGCCTCGGAAT TTTCTGAGAACTTTTAAAAGCAACCTTTTTTTGGCACTGTTAATACAGAA AGGGATGTTTTCCAGAATATTTTACTCTTTTTCAGCAAAAAGCTTGTTTA GAAGATTTTCAAGGTTTTTTTGAAGATAGAAGTTTTGCTTTGGAAATAAT GAAGGTTGCAAAGTACTGTCAAAAAGAACATTAAGAACAGCTGAATAACA TGAAGCCTTAAAATTCCCAAAACTTAAGAACAATTGAGCCTTAGTCAAAA TTTACTGGTTCTTTTAAAAAGTGATTGTAGTTCATCAGTTAAGGCCTTTG AATTTTGTCAATGCATTGCTTAAAAAGCTAACTTCTGTCTTTTCTATCTT CAGAACAATTCAAAATGTTGTACGATCGGCAAAACAAGATCATGACAGAA ATTGTGAAATTAAGAGCACACATCGACAACAAGATGGCATCTCTTCCCAT CGAAGACGATCAATTCCAGCTTCCAGAAGTAAACAGCCAACAAGAAATGG ATACCTTGGAAGAAAATCTAAATGATCCTGATTTCTTAGCAAAGTTTGTA AGTATGATTAATTCAGTTAATTTCAATTTAGCTGTCAGAAAAAACGAAAT TCAAATCCCCAGCCATAAAAGATATGGGAATATCGATCCCCATTGAGTTT TGGTCCGTTACTTTTACCTCCACTAGCTAATAAAATCCCACCGGGTCTGT GAGAAGGGGGTATCTGATTAACACCAAAAAACAGCGAACAACAAACATCC TGTTTCATCATAGTAAATTATGTGAAGACTTTGTGTCATATCTTTGCACT GAGTAGATGCTTTTGAACGTTTTTTCACAGTGATTATGCTCTGAAATTGA AGAATTACCTCTTTGAAAATGGTGATAATATCTCAGTAAATTTTTCTTTT TTCTTATCTATATCTTCATTTTGAAAGATTTTTTCAACTTTCTTTTTGAT AATATCCACTTCCGGGTTAACTTTTCGACCGGCACCTGCATCTCTATCAA ATTGAAGGTGAAATTAAATTCGATCTCTTTTTATAGAAATCTCGTATCGC ACGAATTGGCGGGGTTGAATATGGTGATGCTACAATTCTAGTGATGGAAA AGTAAGTAGTGATAAAAGAGATCCTTCGGTCTTCTAGATATTTAAATGTC TAATAACAAAGATCTTTCAATACTGAAAACGATAGTGCTTCAAATCTTGA GATGGTGATTTTCAGTTCATAGTTCTGAAAGTTTTCTGACTACTGGTTTT GTACGTCCGATGTTTATTATGCATGGTTCTTCAACGAGGCAAAGGAAAAC AATGCTCTATTTAATTGCAACATTTTTTAAATAAAAAGACTTTTCCTTTT TGTTTTTTTCCATCGTGCATTTCGAACTTTAAATTAAAGTTAACTAAACA AAGACCAAGTTTTTTCCCAAATGGGGTAGATCCTAGTGGGTCACTGAGGC AGGGGTGTTGTGTTATATCGTTCTCTTTAAAAAATCACAATTCAAAATAC ATAGATCATTTTCAAAACTTTTTTTCTTTAGATTTTTTACAAGAGCTTTC TTAAGCACCTGCAACATGGAAGGAAACAACGGGAAGTTTGCCTTCAAGAA ATCCAAGGCTTATTCTGCAATTAGTGGTAATTTGTTTCTACTTTTTAAAA TTTAGTGACTGGTTGATTCTAATGAATAATCAAATAAAAAAGAAGGCTGT TTCTTACAATCAATCAAGCCCAATCTAGTGTACCAAATATCTATCCTACG AAGAAGATTTTAATGATCTCAATAGGTTTCTCAGATTAAGAAAGTAAGGT GACTGATATCTATTCTTGTTTTATTTTTCCCTGTGTTAATGTTTTTGTCG GTTTTGCCAACAAATCTCTCTCTCTAAAGATTTTACTATTATTTTATTTC TTTCAATAGATGTTCTAGTGAAAAAGTATGGCACAACGGAAGATAATGTT GGGAAGAAAGTTGCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTGG ACTTGGCAGAAAGAAGTAGAAAGTTTATTTATTTATTTTATTTTTATGTG TAGATTTGAATAGGGTTTTGCTTACTACTTCCCATAATAAAACATGGACC TGACTGGATTAATTTTTATTTTTGTTAAGTCACAATATAACATTGAATTC AAGGATTCTTAGCCAAAGTAGCACTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053234TCONS_00053234Clytia hemisphaericatranscript
TCONS_00053233TCONS_00053233Clytia hemisphaericatranscript
TCONS_00053232TCONS_00053232Clytia hemisphaericatranscript
TCONS_00053231TCONS_00053231Clytia hemisphaericatranscript
TCONS_00053230TCONS_00053230Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053230-proteinTCONS_00053230-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_227supercontigscaffold_227:101072..109099 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.22 0.41 0.13 1.83 2.05 1.92 2.8 1.58 1.76 0.67 2.06 1.81 1.16 0.35 0.63 0.17 0.53 0.24 0.27 0.19 0.17 0.13 0.17 1.48 2.31 0.28 0.53 0.4 0.14