XLOC_034046 (gene) - C. hemisphaerica

Overview
NameXLOC_034046
Unique NameXLOC_034046
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_237:209129..219109+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034046 ID=XLOC_034046|Name=XLOC_034046|organism=Clytia hemisphaerica|type=gene|length=9981bp|location=Sequence derived from alignment at scaffold_237:209129..219109+ (Clytia hemisphaerica)
GAAAGTCGTCTGCAAAATGAAGATGAATGTTGTCTGCAAGATGAAGAAGA
ATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCAAGATGAAGAAGAAT
GTTGTCTGCAAGATGAAGAAGAATGTTGTCTgcaagatgaagaagaaagt
CGTCTGCAAGATGAAGATGAATGTTGTCTGCAAGATAAAGAAGAATGTTG
TCTgcaagatgaagaagaaagtTGTCTGCAAGATGAAGAAGAATGTTGTC
TgcaagatgaagaagaaagtTGTCTGCAAGATGAAGAAGAATGTTGTCTG
CAAGATGAAGAAGAATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCA
AGACGAAGAAGAATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCAAG
ATGAAGAAGAATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCAAGAT
GAAGAAGAATGTTGTCTGCAAGACGAAGAAGAAAGTTCTCTGCAAGATGA
AGAAGAATGTTGTCTgcaagatgaagaagaaagtTGTCTGCAAGATGAAG
AAGAATGTTGTCTGCAAGATGAAGAAGAATGTTCTCTGCAAGATGAAGAA
GAATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCAAGATGAAGAAGA
ATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGNAAGTTCTCTGCAAGA
TGAAGAAGAATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCAAGATG
AAGAAGAATGTTGTCTGCAAGATGAAGAAGAATGTTCTCTGCAAGATGAA
GAAGAATGTTGTCTgcaagatgaagaagaaagtTCTCTGCAAGATGAAGA
AGAATGTTGTCTGCAAGATGAAGAAGAATGTTGTCTGCAAGATGAAGAAG
AATGTTGTCTgcaagatgaagaagaaagtTGTATTGAAGAAAAATCACCT
GATGTAAGAACTGAAGAAATTGAAAcggaagatgaagaagatgacGGTGA
TAATTCCGTTACTTCGAGTTCAAGGtacgcattttttataagaacattct
acATTTTCttaaagccttcaaatgttcttaacttttcgagtttgaAACCC
TATTTGAATAACCTTTAAAAACTTCCAAATATGCCATTTTATTTACTCTG
TATTTTATAGATTCTATCTTGCGGGGGGGGCTATTAGGGTCAAACCACCa
tttactttaatcggattaaatttagCGAGCGAgagaaatcgcgaaatttt
ttggatttaatttcgcgagttttgaaaaatttcgcgaataTACCTgaaaa
acagctgaaaaatactgtagccattttttgccacaAATGAAGACTTTGCC
TTTGCACCTTGGACTGGTTTCTCCGCCAAAAAtgcgattttaaaaatttt
gtggtggatttaattttgcgagtcAGGAATCTCATGCGTTTTCACGAGTT
TTAATTTcacgaaaatggcaaaaattcgcgaaatcgcgaaatttaatctc
gcgaaagttaatccgattaaagtaataTTAGTTGTCTTCCTTCTACTCAC
CACCAATTTTTTCCATCCaaattgttcttaggtttttgcAAAACAAAAGG
CCACCTGTTTTTATTTAGATAATGGCGTTGCCTCTTAACGATAGTGAATA
ATTGCACTTTTGATGAGGACGGCGCAGTGACTGAagtgatttggaataac
ccgcagtttgACCTGCAAAACGGTAAATATAAAAGACTTCCTAACCGTCG
TCCTAATTCAATTGGGATATATAGATAAATCATAAGATAACCGTCTCCGC
TCCTGTAAAACACAGATATATAATTTCGCTTTTTTATCTTTCTAGCGAAA
CCGAAGTCTCTTATTATTTCATACCGACACCTCGAAAGAATGTCGGTTGT
ATTTCAAGGATACAGCATTTCTATGACGACTGGAAATGGAATAAGGAGTA
TAGAAGGAGAAACCGGGAAGCTAGAAAACAAAGTATAATAAAATGGCAAG
AAGAAATCGAACGCAAATGGAAGTTGGGTAGAGATCTAAGGTACGTTCTG
AACTTTGATCCCTAACGAggtttcccagctggcacacaacgtagtttcaa
cgtttatctaacgttcacaacatccatgtaacgttagatgaacgttgaag
caAGGTTTTGAGCCAGCTGGGTCTACATTAAACCTCggtaaaatgaattt
tttttttccaaagatttttttttagtttaatgtattagtagggggaaatt
tgttttttttttgaggtcgctcgacttttttagtcaaagcacttgttata
catttttggaaagctaagggataggggaatcaaaataatttgggtgccaa
tttttttcggacactttggtgtgattttcggacaaatacgacggtctcag
gcaaaaatcatagggtgaaaaattNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNattgcgagtataggtgatttctttacc
taactcgagatattaatccttaaaaacagtgtttttcagtgtttttcagc
cagaaacagctgttttgtccagttttcgCACTTTCGGAAGTTGAGGTTTC
ACAGTGTCCAGAATTTTAGTTCCGCCTTCAGCTTTTCTTTTATGTGCAGA
TATTTCAATTTCGAATTATAGTTCATAAATAAACGGAGAAACATTTTTTC
CTAGTTTAAACTAACTGACGAATGCTTGAAAGagcaagaaactttaagta
ttatggaaaaaagtttctccGTTCATTTCTAAACTATGATAACGATCTAC
CAGGGTATAGGAGCACTCTATTGAGTTTAAAGACAGTCATACACAggtgg
ggggggggtcttgcagttactccttgacactatatgtggagtaactgcaa
ttttggacattttctacagacaccaccacccttgcagttattccatagtg
tactaactgattttaccctcaaaattggtgtatcccaaccccaaaaatgc
caaatttggcaattttttcactgaattcctcatttttgataccattttac
tgggtacgtcttattaacgaccgttcaagagttaaatatctcaatcattt
tccaagtttatctttcatgccttgattgaagaaaaaatttgtgatttttt
tttgacttttgaaaaaaatgttttgaatttatttgcttccggaattttta
aaaacctaaaattttaagtgaaaattgaaaaatgtgctcacttagtacac
catatcctaccaaaatcgacaattttgggcttaagcaccacccatgttgc
agttagtccactggtggagtaactgttttcccaaattttggtttatatac
caccacggtagtaattgtcatagtgtttatataataactgcatgaccccc
ctgTCATACAATCAATTTCGAATTAAATACCTTAGATATCTAACTCCGAA
AATTCCCGACCAAAATATCACACCGCCAAGCAATAATATGGTAATATCAA
ATGAAGAGAAGTGTAACATAATCAATGTTTACATTTATGGCATTCCCTGG
TTAAATAGAAACGATATTAACGTAGATTTTGATGAACCAATCCAACCATA
TATCGCTTTGCAGATGGACCACAACCAGAATATCTTTGATTTAAAAGAAA
GAATTGGTCAAATATACAATATCCCTCCTAAAAAGCAGATACTGTTTACT
GCTCCACCAAAGAAACAACTCGATGATGTAAAGATTCTTGACGACGAATC
TGTTCCATTGATTCAATATTTAAACCCTTTAGATCACATACATGGTTTAT
TACAGGTGACAAAAGATTCCTTTGATCTTCAATTTATTTCACTTTCCACT
TTGTAATTACAATAGGATcactataactcgaatgtcctCATAACTCAAAT
GTCCCCTCCCCCTTATGCTGTTTGAGTTATGTTCAAGATTCTACTAAAAC
CTCTTTCAGGTTCGTTGTTCGACAACATTTGTCGGTTGAAGACACAAGTC
TTGAAAGTGTGCTTTATTTTtattatgagagtttcttgttaagGATGGCT
TTCAATATTAGTCGAATAAAGGaccctatcgaatagtagaacgtcgacag
ttagagagcgtcaactgtagtcgTAAACATCCCCTCTTTTTGTTACATCT
GTATTAAAGTTTGTATTATGAAACAACTCGATAATGTAAAGATTCTTGAT
GACGAATCTGTTCCATTGATTCAATATTTAAACCCTTTAGATCACATACA
TGGTTTATTACAGGTGACAAAAGATTCCTTTGATCTTCAATTTATTTCAC
TTTCCACTTTGTAATTACAATAGGATcactataactcgaatgtcctCATA
ACTCAAATGTCCCCTCCCCCTTATGCTGTTTGAGTTATGTTCAAGATTCT
ACTAAAACCTCTTTCAGGTTCGTTGTTCGACAACATTTGTCGGTTGAAGA
CACAAGTCTTGAAAGTGTGCTTTATTTTtattatgagagtttcttgttaa
gGATGGCTTTCAATATTAGTCGAATAAAGGaccctatcgaatagtagaac
gtcgacagttagagagcgtcaactgtagtcgTAAACATCCCCTCTTTTTG
TTACATCTGTATTAAAGTTTGTATTATGAAACAACTCGATGATGTAAAGA
TTCTTGATGACGAATCTGTTCCATTGATTCAATATTTAAACCCTTTAGAT
CACATACATGGTTTATTACAGGTGACAAAAGATTCCTTTGATTTTCAAGA
AGAAGTTACCAAGATGTCTGGAACGAGAATGATTCTTAAACTTGGTTTAA
GTATGATTCCAAACAATACACACAGTAAGGATATGATAACACCAGAGCTG
CTAGAAAACCTTCGGAATCATCACATAACGCATTTTTATGAAATCAAGTT
CAAAGAATTTGGATCGGAGCAACTTATTAGTAGATTTAGAATGTATTCAT
TCATGGATAATAATGATATTGATTGGGCAATACAGACCATATGCAACAAC
CATGTCGATCGAGATTCAAAATTCGATTCAAAATTCACAAAGGATTCAAA
AAAATTACTGTATAAAAATGTAGAAGGTCGATTCACCATTGTTAACCAGT
TGGAAAATAATGGCAGGTATGGGTTTTATAcatatttatttataaacaac
TCCAATGTTCTTGGCCTGGTCGGTCTGGGATTGCTTAgtattctagctca
ttttctgaaaaatttgcttttatACATTCTATGCTTATTCCACTTATTTG
GTCAATCAGCagccctggggggggggggggggggggggggNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGAAATa
caaaagggcgtaaaaagacaCCTCTGATTACTAATCTCGGCGCCCCTTTG
GTCTTTTAGGCCTTAGATAATATGACAGTTTTCGGCCAAAATATCCCAAA
ATTTTCGTGCTCGTTTCTCTCGCATAATTTTGCAAAGATATTTACTTTTA
ATAGgggtgtcaaaatcaaaaacctCTAAAACTTCCTCCCCAGCTTGCCC
GAACTTTAGTccacccaccacgctactggggTCAATGGCTATCGTTTGCT
ATGGTTGGATTATCTAAAGAGCTTTTACTTTACAAGATAGTGAAATTTGA
ACTCTCGAGCCTTAGCAaactggttgcttataaaagaaattggtacaata
atttttgatgccttaactggattaaatttcgcatgGATTAACATTCGCAA
TTTacgcgaattttggccattttcgcgagAATTAGTCTTTGCAAAAATTC
CAAATTCGAATTTGGGACATAACCCACAGGAAATGAGAGAAATTGGATGA
AGAAGAGGCTGATTTGCGAAATTTTGTCCCacgtgaaaattaatccacta
ttcatgatatgcaccactgcaatgactccACGAAatgcaacttttttttt
tccacTGCCTATACGTtgctttttctattgtttttgtgacgtattgggtg
gaaaatttttaaaattctcagaagactcttcagtggtgcatatcatgaat
aggtaaTTTTGGTAACAAACAATATTTATGCACTATTTTATAATATAGTC
ATTCATTCTCAAACTTTTATCCTTTTTTTCAATGAAGGGAAATGATTGCA
GTTGAGAACGAAATGGGTGAGGTGAATTTCTATTTGGCTAAATTTGAGTC
TTTCAAATTAATATTCGAAACGAATGACGTGTGTCCATCAAGTCCAGCAA
TACATACATCAAAACTAACTATTTCACCAGCTGAATCGCTAGATCCTTCN
TCCATCAAGTCCAGCAATACATACGTCAAAACTAACTATTTCACCAGCTG
AATCGCTAGATCCTTCAACTCCAATATCAGATTCGCCAAAACCATCAATA
CCACCAGATTCACCAGAAATGTTAATTCCAAAAGCGCTAGCATATTCACC
AAAACTATCAAATCGTCCAGCAAAGTTACCAGATTCGTCAAGTCTAACAT
CAGATTCGCCAGATTCATCAATTTCAATATCAGATTCGAAAGAACCCTTA
TCTCTAAAAGAAGATACAGCAGAACTATCAAATCGTCCAGCAAATTTACC
AGATCTGTCAAATCTAACATCAGGTTCGCCAGATCCATCAATTCCAATAT
CAGACTCGACAGAACCATTATCTCTAAACGAAGATACAATAGAACTATCA
AATCGCCCAGCAAAGTTACCAGATCAGTCAAATCTAACATCAGGCTCGCC
AGATCCATCAATTCCAATGGCAGATTTGACAGAACCATTATCTCTAAAAG
AAAATACAACAGAACTATCAAATCGTCAAGGAAAGTcatcagatccatca
actcTAACATTGGGTCCGCCAAATCCATCAATGCCACTGtcagattcacc
agaaccattgaaTCCAATAGTATTATCCCCATCATCAGCTCCGTCAGATA
AATCGATTCCACCAGTAGATTTGCCAGAGCTATCAAACTCAAAAgtagat
tcaccagaaccatcggTCCCAACAGAAAGTCAGCCAGAATCATCAATTCT
ATCAGCAGACCCTTCAAACCCAGCATCAGATTCACCAAAACCTTCAATTC
CATCATCAGATTCACCAGAGCCTTCAATCCCAGCATCAGATTCACCAGAG
CCTTCAATCCCAGCATCAGATTCCCCAGATCCTTCAATACCATCAACAAA
ACTATCAATTCAACCAACAGATTCACCAGATCCTTCAATACCATCAACAA
AACTATCAATTCAACCAACAGATTCACCAGAGCCTTCAATACCATCAACA
AAACTATCAATTCAACCAACAGATTCACCAGAAATGATGGATTCACAAAC
ATCTTCTACTCAATACACCGAAGAGATAATGAAAGTAGTACTTAAATATA
ATCACGAAATGAATGTCCTTGATGTCAAAAAAGCAATCGAAGAAAAATAT
AGNAGATAATGAAAGTAGAACTTAAATATAATCACGAAATGAATGTCCTT
GATGTCAAAAAAGCAATCGAAGAAAAATATGGCATCAGATGGTTTCATAT
AGAATTGTCATTTAATGGAAAACTTATCGATGACAACGAAAATATGTTTG
AATTGTTTGTCAAATCAAATCCAACATCGCGAGATGATCTTCTTTGTTTA
CATGTGTCGGTTGTCAGGCGTCCGTTTCCAATTCGAGTCATGATGGAAGA
AGATACTGTTTTTGAAGTTGAAGTAGAAGAAGATGACACCATTgaaaagg
ttggaatttttgacGGCTGGAAAattgttttcgaaaaattataaacgccc
ctccccctatgaaaaatgcaaaatttagTTCCTCTACTTAATGACAAAAC
TCGTCAAAATTCTCACCGAAATTGAAATAATTGCTGCCTCGGGGGAATGC
aggatataatttttttttttaatttacccCGGGACGGCAGGTCTAACCCC
CGGACAAGTatcagttgaccccccccctgaacatttaaattaccctcaaa
caaaGCAAAACTACCCTCGagcagagcaagtttacccctcAGACAAGACA
TATGTAGATTTTCCACTACCCTCCGGACACCTGAAAGAGCCCAATGTCCT
GAGGAGGAGAAAATAGGCAGACGGATTTTCTAGGCCATTAAGTTTGATGG
CCCGAAGCGTCTAGTGATGAATCTGTTGGTTGGTAATGAAGCTTTAAACT
CGATGCGAATTAGATCATGTTCAGTCGTTACGATTCCGTTTTGCtccgaa
attaaatgttttaccatgacaaacgatagcccttgatCCAATAAGTATAA
ATAGCGGCAGTTGcataaaggtagagcatccagctacggtgtgcAAGGTT
GAGGGTTCGATCCCCAACCGGGTCATCAAAGATTCTCagaatggtacttg
atgcctctctacttgatgctcagcaactaaagagacagATCAAGTTAATG
TGGAGAAATCCGGGGAAAGAAGTGGCGCCCTCCTCTACCTTCaggtagac
agctagagaaagGGGAGCCCTCGGTTTGCTATCGACTGTGGTgacaaact
tacttacttaaacaTAAATATGGTAAAATATCAGATGATCAAAGCAAATT
AGCTAGAATACTAAGTAATCCCAGGGCTGACCCGAGAATTGTATTTCCTT
CCATTTAAAACAGGTGAAGGAACGTATTACCAAATTGAAAGAGTTTGATT
TCGAATTCGAGTTAGACATTGATATATGTGAGTATCTCAAAGACGGCAGT
AAAGTTCAAGACTACAAGCTAGAACCAAAACAAGAAATCCGCttagaaaa
gaaatatgaaCTTCATTTCCATCTTATTTTCAAAGATGGTCCAAATAACA
GGGAAGATATTGTACACCGTGAGATTTTTCCAGTCATAGTATCACTGGAC
TGTTTGTATAGGAATGTTGGTGATGTTGTTAAAGATATTCGACAAATATA
TAATATAGGTGATGAAATGGTGATTCAATTCTTACATGCTAAACATAAAG
TCTCAAAAAGATCTATCATGAAAAGATTTATCTACGAAAAAATTGCCGAT
GCTTCACCATTGACTTTTGCTGTTATCCCGAAAGCTGGAGATGAAGAAAT
AGGAACTCAGGGATGTAATTTGCTATgataaatacacgctttttttttat
aagaatgagtATACCACAGATTTTTGCATATTTCCCTACGGGAAATATTG
GACTATCTGTGCCTAAGTGATACCAGGCTCAAAACTATTTAACAAACAAT
CGTATCCCTGGATttaatactttaatcggataaATTTTCTCTGGGATTAA
ATTTTCGctgggattaaatttcgtggttGAGCTCATTCGCGGGGTTTTAT
TTACGCTGGTGGCATGATATTGAgagagacaatattttcacaatttgGTG
CCATTACTTACTGCCAAAACATGCAggtttgttgttgaaatacgcattat
taaggtatctttgatgccagtaaatatttaaaagatggtttatttaacat
ttttgagttttgtatatataatataaaaaaattttgcggataaggccttt
ccaaatttccattgggactaaTTTCGCGGATGAACCCAAATCTGCGATAT
TAAAACCCCGCAAAATGTTATCCCATTAAAGTCAAGAAAATATTGACCGA
TCAATGATCAGTAAAAATGATATGGAAAAGTAATCGGAACCTAGATTTAT
TACACCGATGGACTTATAAGGTCATAGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053926TCONS_00053926Clytia hemisphaericatranscript
TCONS_00053927TCONS_00053927Clytia hemisphaericatranscript
TCONS_00053928TCONS_00053928Clytia hemisphaericatranscript
TCONS_00053929TCONS_00053929Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053929-proteinTCONS_00053929-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:209129..219109 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LOC105375131PREDICTED: basic proline-rich protein-like Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.11	0.28	0.17	0.5	0.23	0.4	0.57	0.25	0.23	0.35	0.21	5.13	3.16	1.14	1.44	0.22	0.22	4.48	5.15	0.21	0.53	0.28	0.17	0.71	1.25	0.92	0.44	0.34	0.25